| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,541,821:1 | +G | 6.9% | coding (494/1503 nt) | nhaB → | Na(+)/H(+) antiporter NhaB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,541,821 | 1 | . | G | 6.9% | 525.4 / 32.3 | 130 | coding (494/1503 nt) | nhaB | Na(+)/H(+) antiporter NhaB |
| Reads supporting (aligned to +/- strand): ref base . (72/49); new base G (2/7); total (74/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.86e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.82e-01 | |||||||||||
Only 100 of 140 total aligned reads displayed.
GTTCCTGTTCTCACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCC > NC_002947/4541672‑4541970 | gttcctgttcTCACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGgt < 1:270647/150‑1 (MQ=255)gttcctgttcTCACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCGATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGgt < 2:216372/150‑1 (MQ=255) ttcctgttcTCACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGgt‑g > 2:731427/1‑150 (MQ=255) tcctgttcTCACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGgt‑gt < 1:2232998/150‑1 (MQ=255) tcctgttcTCACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGgt‑gt > 1:1420443/1‑150 (MQ=255) cctgttcTCACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTa > 2:1593260/1‑150 (MQ=255) ctgttcTCACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTac > 1:931524/1‑150 (MQ=255) gttcTCACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGgt < 1:1684971/144‑1 (MQ=255) gttcTCACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTacca > 1:2101021/1‑150 (MQ=255) aCGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACcgcgt > 1:2448675/1‑150 (MQ=255) aCGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACcgcgt > 1:1364980/1‑150 (MQ=255) aCGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GGTACACcgcgt < 2:2727495/150‑1 (MQ=255) cGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGGTA‑CACcgcgta < 2:1611908/150‑2 (MQ=255) cGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACcgcgtc < 1:2545483/150‑1 (MQ=255) cGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCACTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACcgcgtc < 2:1953170/150‑1 (MQ=255) cgttttGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACcgcgtcgc > 1:2745136/3‑150 (MQ=255) aTTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGGTA‑CACcgcgtagaa < 1:1525840/150‑5 (MQ=255) aTTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACcgc > 2:792223/1‑144 (MQ=255) aTTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACcgc < 1:792223/144‑1 (MQ=255) ttttGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGGTA‑CACcgcgtagaag < 1:731427/150‑6 (MQ=255) ttGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGGTA‑CACcgcgtagaagcc < 1:1313929/150‑8 (MQ=255) cTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCggg < 2:2101021/150‑1 (MQ=255) cTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCggg < 1:2883984/150‑1 (MQ=255) tCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCgggg > 2:2571194/1‑150 (MQ=255) tCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCgggg > 2:1293275/1‑150 (MQ=255) tCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCgggg > 2:2722659/1‑150 (MQ=255) cGGGGTGCGTGCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTGCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGc < 2:171766/150‑1 (MQ=255) gggTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCa < 2:1132139/150‑1 (MQ=255) ttCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCgg < 1:2935094/138‑1 (MQ=255) ttCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCgg > 2:2935094/1‑138 (MQ=255) ttCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGCCGTGTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCcgcg > 1:3010883/1‑150 (MQ=255) tCCAAGGCCATTCTGGCGCTGCTGTTTTTCGTACTGTCAGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATTATCAGCGCTGCGGGCTGCTTCTACGCTGT‑GTACCACCGCGACGCGTCCGCGGCAACTCggcgc > 2:71027/1‑150 (MQ=255) cAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGa > 1:1133883/1‑150 (MQ=255) aaGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATTATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAg > 1:2060203/1‑150 (MQ=255) aaGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAg < 1:2722659/150‑1 (MQ=255) aGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGTGGTA‑CACcgcgtagaa < 2:1736987/128‑5 (MQ=255) aGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GGTACACcgcgtagaa > 1:1736987/1‑124 (MQ=255) ttCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGAcgacg > 1:1287302/1‑146 (MQ=255) ttCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACa > 2:963124/1‑147 (MQ=255) cTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCa < 2:2448675/150‑1 (MQ=255) gcgcTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTg < 2:2745136/150‑1 (MQ=255) gcgcTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATCCCCTGACCGTCACGGCGGTGATTATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTg < 2:2060203/150‑1 (MQ=255) gctgctGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATTCGCGCGAGGACAGCGCACTGga < 1:577981/150‑1 (MQ=255) tgctgTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTacca < 2:2241539/103‑1 (MQ=255) tgctgTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTacca > 1:2241539/1‑103 (MQ=255) tgctgTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGgaga > 2:2425632/1‑150 (MQ=255) tACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAg > 1:1515950/1‑150 (MQ=255) tCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCggg < 2:2069810/102‑1 (MQ=255) tCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGcc > 1:1862363/1‑149 (MQ=255) gCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCAc < 1:207132/150‑1 (MQ=255) gTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCt > 2:221116/1‑150 (MQ=255) gTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCt > 1:1933206/1‑150 (MQ=255) aTCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCg < 2:654304/150‑1 (MQ=255) tCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCcgcgc > 2:1333989/1‑102 (MQ=255) tCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCgg > 2:1803890/1‑150 (MQ=255) tCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCgg > 1:2754851/1‑150 (MQ=255) tCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGAAAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCgg > 1:1272556/1‑150 (MQ=255) ccGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCggg > 2:2289183/1‑150 (MQ=255) cgcgTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTGCCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAg > 1:2832297/1‑127 (MQ=255) cgcgTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAg < 2:2832297/127‑1 (MQ=255) cgcgTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGa > 1:919074/1‑150 (MQ=255) gcgTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGaa > 2:1601129/1‑150 (MQ=255) gcgTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGaa < 1:2425632/150‑1 (MQ=255) gTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGa < 1:2571194/150‑1 (MQ=255) ttCTCGATGCCCGGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGAcc < 2:1255287/150‑1 (MQ=255) gATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGAc < 1:2289183/150‑1 (MQ=255) gATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGAc < 2:2070701/150‑1 (MQ=255) aTGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTTCGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGAcc > 2:2221898/1‑150 (MQ=255) aTGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCg > 1:1774439/1‑123 (MQ=255) aTGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGAcc > 2:3043283/1‑150 (MQ=255) gccgtGACGGTCAGGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGAc < 2:292666/107‑1 (MQ=255) ccTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGtt > 2:1876140/1‑150 (MQ=255) aCCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCcgc > 1:2791089/1‑150 (MQ=255) ccGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAg < 2:65132/83‑1 (MQ=255) ccGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAg > 1:65132/1‑83 (MQ=255) gTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGAcc > 2:1848908/1‑133 (MQ=255) cggTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGc < 2:1364980/150‑1 (MQ=255) tGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTa < 2:2023814/150‑1 (MQ=255) atcaGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGc > 1:1520275/1‑147 (MQ=255) atcaGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCACCTTCCTGCGTAGc < 2:1520275/147‑1 (MQ=255) tcaGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCctgc > 1:1930068/1‑150 (MQ=255) aGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGCCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACAAGGAAGAGCTCGACCAGTTCCGCGCCTTCCTGCGTAGCctgctg > 1:2503759/1‑150 (MQ=255) gcgcTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTTGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGa > 1:478026/1‑150 (MQ=255) gcTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATg > 1:1199853/1‑150 (MQ=255) gTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGgc > 2:2868026/1‑150 (MQ=255) cTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCtgt < 1:1293275/150‑1 (MQ=255) cTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCtgt > 2:605817/1‑150 (MQ=255) cTTCTACGCGGT‑GTACCACCGCGCAGCGCCCGGGGCAAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCtgt < 2:1272556/150‑1 (MQ=255) ttCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGGGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCtgtg > 2:2210422/1‑150 (MQ=255) ttCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCtgtg > 1:1549345/1‑150 (MQ=255) ttCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCCTAGCCTGCTGATGCATGTCGCtgtg > 1:72495/1‑150 (MQ=255) aCGCGGTGGTA‑CACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGAt < 2:497260/133‑1 (MQ=255) aCGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTa > 2:1074391/1‑150 (MQ=255) aCGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTa > 1:111960/1‑150 (MQ=255) gcgGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAg < 2:1123068/102‑1 (MQ=255) gcgGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAg > 1:1123068/1‑102 (MQ=255) gcgGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTAcc > 1:1853809/1‑150 (MQ=255) ggT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTa > 2:1558062/1‑119 (MQ=255) ggT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTa < 1:1558062/119‑1 (MQ=255) t‑gtACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGccc < 2:931524/150‑1 (MQ=255) | GTTCCTGTTCTCACGCATTTTGCTCGGGGTGCGTTCCAAGGCCATTCTGGCGCTGCTGTTTTGCGTACTGTCGGCGTTTCTATCCGCGTTTCTCGATGCCCTGACCGTCACGGCGGTGATCATCAGCGCTGCGGTCGGCTTCTACGCGGT‑GTACCACCGCGTCGCGTCCGGGGCCAATCCGCGCGAGGACAGCGCACTGGAGAGCGACCAGCAAGTCGCTCACCTGCACCGGGAAGACCTCGACCAGTTCCGCGCCTTCCTGCGTAGCCTGCTGATGCATGGCGCTGTGGGTACCGCCC > NC_002947/4541672‑4541970 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |