| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 401305 = | 40 (0.350) | 16 (0.140) | 4/236 | NT | 19.2% | coding (888/1059 nt) | PP_0334 | transposase |
| ? | NC_002947 | 3969005 = | 96 (0.870) | coding (1089/1179 nt) | PP_3498 | transposase | |||||
TCCGGTTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/401457‑401305‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGC > NC_002947/3969005‑3969119 TCCGGTTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGA < 2:2066693/150‑1TCCGGTTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGA > 1:1075983/1‑150 CCGGTTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGAT > 2:2730967/1‑150 CGGTTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGGTCAAGAGCCGGCGATCA‑TCTGGCTGATC < 2:372052/150‑1 CGGTTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGATC > 1:2828835/1‑150 CGGTTTTTCGGTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGATC < 1:1667402/150‑1 GGTTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGATCG < 1:2911287/150‑1 GTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGAT > 2:69297/1‑135 GTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGAT < 1:69297/135‑1 ATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAA > 2:2441401/1‑150 ATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGG > 1:894227/1‑150 GCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGATCGGAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCT > 2:2465046/1‑150 CGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTA < 1:770337/106‑1 CGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTA > 2:770337/1‑106 CGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAA < 1:677978/110‑1 CGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAA > 2:677978/1‑110 GCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTG > 1:500986/1‑86 GCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATATGGGCCCTG < 2:500986/86‑1 CCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTCACAGAGCGATCAGGTT < 2:1731921/103‑1 CCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTCACAGAGCGATCAGGTT > 1:1731921/1‑103 CCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGATCGGAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGA > 1:2613510/1‑150 CCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGATCGGAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGA < 1:2465046/150‑1 CTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGATCGGAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGA < 1:282920/130‑1 CTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGATCGGAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGA > 2:282920/1‑130 GCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGATCGAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGC < 1:2441401/150‑1 GAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTA > 1:988523/1‑103 GAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTA < 2:988523/103‑1 TCCGGTTTTTCGTTCGGTTTGCGTTGGTAAACCTGATCGCTCTGTAACAGGGCCCAGATAATCCGCAGATTTCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCA‑TCTGGCTGATCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/401457‑401305‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgAAATCTGCGGATTATATGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGC > NC_002947/3969005‑3969119 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |