New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1492317	87 (0.760)	7 (0.070)	6/228	NT	7.4%	intergenic (+71/+24)	cysNC/imm	sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase/colicin‑E7 immunity protein
	?	NC_002947	= 1492325	93 (0.870)					intergenic (+79/+16)	cysNC/imm	sulfate adenylyltransferase subunit 1/adenylyl‑sulfate kinase/colicin‑E7 immunity protein

ATCTTGTGATCGACACCCAGGCCACCAGCGTGGACGAAGGCGTGAAACAGGTGCTGGACGTGCTGCGTCAGCGTGGCGCGATCTAAGCGCTAGCCTGCAAGGAAAACCCCGCTTCGGCGGGGTTTTTTCTATTGCTCAGTTCGGGTGAAAAGGCCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1492161‑1492317 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggccctGA‑ACTCTGAGGGCCTTTTCACCCGAACTGAGCAATAGAAAAAACCCCGCCGAAGCGGGGTTTTCCTTGCAGGCTAGCGCTTAGATCGCGCCACGCTGACGCAGCACGTCCAGCACCTGTTTCACGCCTTCGTCCACGCTGGTGGCCTGG  <  NC_002947/1492325‑1492177                                                                                                                                                                                                                                                                                                                     ATCTTGTGATCGACACCCAGGCCACCAGCGTGGACGAAGGCGTGAACCAGGTGCTGGACGTGCTGCGTCAGCGTGGCGCGATCTAAGCGCTAGCCTGCAAGGCAAACCCCGCTTCGGCGGGGTTTTTTCTATTGCTCAGTTCGGGTGAAA                                                                                                                                                               >  1:1196703/1‑150   CTTGTGATCGACACCCAGGCCACCAGCGTGGACGAAGGCGTGAAACAGGTGCTGGACGTGCTGCGTCAGCGTGGCGCGATCTAAGCGCTAGCCTGCAAGGAAAACCCCGCTTCGGCGGGGTTTTTTCTATTGCTCAGTTCGGGTGAAAAG                                                                                                                                                             >  1:2712200/1‑150      GTGATCGACACCCAGGCCACCAGCGTGGACGAAGGCGTGAAACAGGTGCTGGACGTGCTGCGTCAGCGTGGCGCGATCTAAGCGCTAGCCTGCAAGGAAAACCCCGCTTCGGCGGGGTTTTTTCTATTGCTCAGTTCGGGTGAAAAGGCC                                                                                                                                                          <  2:2712200/150‑1      GTGATCGACACCCAGGCCACCAGCGTGGACGAAGGCGTGAAACAGGTGCTGGACGTGCTGCGTCAGCGTGGCGCGATCTAAGCGCTAGCCTGCAAGGAAAACCCCGCTTCGGCGGGGTTTTTTCTATTGCTCAGTTCGCGTGAAAAGGCC                                                                                                                                                          <  2:901021/150‑1         agCGACACCCAGGCCACCAGCGTGGACGAAGGCGTGAAACAGGTGCTGGACGTGCTGCGTCAGCGTGGCGCGATCTAAGCGCTAGCCTGCAAGGAAAACCCCGCTTCGGCGGGGTTTTTTCTATTGCTCAGTTCGGGTGAAAAGGCCCTG                                                                                                                                                       >  2:2052791/3‑150                   AGGCCACCAGCGTGGACGAAGGCGTGAAACAGGTGCTGGACGTGCTGCGTCAGCGTGGCGCGATCTAAGCGCTAGCCTGCAAGGAAAACCCCGCTTCGGCGGGGTTTTTTCTATTGCTCAGTTCGGGTGAAAAGGCCCTGA‑ACTCTGAGG                                                                                                                                            >  2:108357/1‑150                          CAGCGTGGACGAAGGCGTGAAACAGGTGCTGGACGTGCTGCGTCAGCGTGGCGCGATCTAAGCGCTAGCCTGCAAGGAAAACCCCGCTTCGGCGGGGTTTTTTCTATTGCTCAGTTCGGGTGAAAAGGCCCTGA‑ACTCTGAGGGCCTTTT                                                                                                                                     >  2:39657/1‑150                              GTGGACGAAGGCGTGAAACAGGTGCTGGACGTGCTGCGTCAGCGTGGCGCGATCTAAGCGCTAGCCTGCAAGGAAAACCCCGCTTCGGCGGGGTTTTTTCTATTGCTCAGTTCGGGTGAAAAGGCCCTGA‑ACTCTGAGGGCCTTTTCACC                                                                                                                                 <  1:108357/150‑1                              GTGGACGAAGGCGTGAAACAGGTGCTGGACGTGCTGCGTCAGCGTGGCGCGATCTAAGCGCTAGCCTGCAAGGAAAACCCCGCTTCGGCGGGGTTTTTTCTATTGCTCAGTTCGGGTGAAAAGGCCCTGA‑ACTCTGAGGGCCTTTTCACC                                                                                                                                 <  1:2052791/150‑1                               TGGACGAAGGCGTGAAACAGGTGCTGGACGTGCTGCGTCAGCGTGGCGCGATCTAAGCGCTAGCCTGCAAGGAAAACCCCGCTTCGGCGGGGTTTTTTCTATTGCTCAGTTCGGGTGAAAAG                                                                                                                                                             >  1:1838694/1‑122                               TGGACGAAGGCGTGAAACAGGTGCTGGACGTGCTGCGTCAGCGTGGCGCGATCTAAGCGCTAGCCTGCAAGGAAAACCCCGCTTCGGCGGGGTTTTTTCTATTGCTCAGTTCGGGTGAAAAG                                                                                                                                                             <  2:1838694/122‑1                                                                                    TAAGCGCTAGCCTGCAAGGAAAACCCCGCTTCGGCGGGGTTTTTTCTATTGCTCAGTTCGGGTGAAAAGGCCCT                                                                                                                                                        <  1:2579463/74‑1                                                                                    TAAGCGCTAGCCTGCAAGGAAAACCCCGCTTCGGCGGGGTTTTTTCTATTGCTCAGTTCGGGTGAAAAGGCCCT                                                                                                                                                        >  2:2579463/1‑74                                                                                              CCTGCAAGGAAAACCCCGCTTCGGCGGGGTTTTTTCTATTGCTCAGTTCGGGTGAAAAGGCCCTGA‑ACTCTGAGGGCCTTTTCA                                                                                                                                   >  1:1334337/1‑84                                                                                              CCTGCAAGGAAAACCCCGCTTCGGCGGGGTTTTTTCTATTGCTCAGTTCGGGTGAAAAGGCCCTGA‑ACTCTGAGGGCCTTTTCA                                                                                                                                   <  2:1334337/84‑1                                                                                                 GCAAGGAAAACCCCGCTTCGGCGGGGTTTTTTCTATTGCTCAGTTCGGGTGAAAAGGCC                                                                                                                                                          >  2:1972782/1‑59                                                                                                 GCAAGGAAAACCCCGCTTCGGCGGGGTTTTTTCTATTGCTCAGTTCGGGTGAAAAGGCC                                                                                                                                                          <  1:1972782/59‑1                                                                                                                               TTCTATTGCTCAGTTCGGGTGAAAAGGCCCTCAGAGT‑TCAGGGCCTTTTCACCCGAACTGAGCAATAGAAAAAACCCCGCCGAAGCGGGGTTTTCCTTGCAGGCTAGCGCTTAGATCGCGCCACGCTGACGCAGCACGTCCAGCACCTGT                                >  1:39657/1‑150                                                                                                                                                      AAGGCCCTGA‑ACTCTGAGGGCCTTTTCACCCGAACTGAGCAATAGAAAAAACCCCGCCGAAGCGGGGTTTTCCTTGCAGGCTAGCGCTTAGATCGCGCCACGCTGACGCAGCACGTCCAGCACCTGTTTCACGCCTTCGTCCACGCTGGT         <  1:2946287/150‑1                                                                                                                                                      AAGGCCCTGA‑ACTCTGAGGGCCTTTTCACCCGAACTGAGCAATAGAAAAAAACCCGCCTAAGCGGGGTTTTCCTTGCAGGCTAGCGCTTAGATCGCGCCACGCTGACGCAGCACGTCCAGCACCTGTTTCACGCCTTCGTCCACGCTGGT         <  2:862422/150‑1                                                                                                                                                       AGGCCCTGA‑ACTCTGAGGGCCTTTTCACCCGAACTGAGCAATAGAAAAAACCCCGCCGAAGCGGGGTTTTCCTTGCAGGCTAGCGCTTAGATCTCGCCACGCTGACGCAGCACGTCCAGCACCTGTTTCACGCCTTCGTCCACGCTGGTG        <  2:1957942/150‑1                                                                                                                                                         GCCCTGA‑ACTCTGAGGGCCTTTTCACCCGAACTGAGCAATAGAAAAAACCCCGCCGAAGCGGGGTTTTCCTTGCAGGCTAGCGCTTA                                                                     <  1:2780719/87‑1                                                                                                                                                         GCCCTGA‑ACTCTGAGGGCCTTTTCACCCGAACTGAGCAATAGAAAAAACCCCGCCGAAGCGGGGTTTTCCTTGCAGGCTAGCGCTTA                                                                     >  2:2780719/1‑87                                                                                                                                                           CCTGA‑ACTCTGAGGGCCTTTTCATCCGAACTGAGCAATAGAAAAAACCCCGCCGAAGCGGGGTTTTCCTTGCAGGCTAGCGCTTAGATCGCGCCACGCTGACGCAGCACGTCCAGCACCTGTTTCACGCCTTCGTCCACGCTGGTGGCCT    >  1:751469/1‑150                                                                                                                                                           CCTGA‑ACTCTGAGGGCCTTTTCACCCGAACTGAGCAATAGAAAAAACCCCGCCGAAGCGGGGTTTTCCTTGCAGGCTAGCGCTTAGATCGCGCCACGCTGACGCAGCACGTCCAGCAC                                    <  1:1927120/118‑1                                                                                                                                                           CCTGA‑ACTCTGAGGGCCTTTTCACCCGAACTGAGCAATAGAAAAAACCCCGCCGAAGCGGGGTTTTCCTTGCAGGCTAGCGCTTAGATCGCGCCACGCTGACGCAGCACGTCCAGCAC                                    >  2:1927120/1‑118                                                                                                                                                           CCTGA‑ACTCTGAGGGCCTTTTCACCCGAACTGAGCAATAGAAAAAACCCCGCCGAAGCGGGGTTTT                                                                                        >  2:1431555/1‑66                                                                                                                                                           CCTGA‑ACTCTGAGGGCCTTTTCACCCGAACTGAGCAATAGAAAAAACCCCGCCGAAGCGGGGTTTT                                                                                        <  1:1431555/66‑1                                                                                                                                                            CTGA‑ACTCTGAGGGCCTTTTCACCCGAACTGAGCAATAGAAAAAACCCCGCCGAAGCGGGGTTTTCCTTGCAGGCTAGCGCTTAGATCGCGCCACGCTGACGCAGCACGTCCAGCACCTTTTTCACGGCTTCGCCCACGCTGGTGGCCTG   >  2:257419/1‑150                                                                                                                                                            CTGA‑ACTCTGAGGGCCTTTTCACCCGAACTGAGCAATAGAAAAAACCCCGCCGAAGCGGGGTTTTCCTTGCAGGCTAGCGCTTAGATCGCGCCACGCTGACGCAGCACGTCCAGCACCTGTTTCACGCCTTCGTCCACGCTGGTGGCCTG   <  1:2759469/150‑1                                                                                                                                                             TGA‑ACTCTGAGGGCCTTTTCACCCGAACTGAGCAATAGAGAAAACCCCGCCGAAGCGGGGTTTTCCTTGCAGGCTAGCGCTTAGATCGCGCCACGCTGACGCAGCACGTCCAGCACCTGTTTCACGCCTTCGTCCACGCTGGTGGCCTGG  <  1:1568157/150‑1                                                                                                                                                             TGA‑ACTCTGAGGGCCTTTTCACCCGAACTGAGCAATAGAAAAAACCCCGCCGAAGCGGGGTTTTCCTTGCAGGCTAGCGCTTAGATTGCGCCACGCTGACGCAGCACGTCCAGCACCTGTTTCACGCCTTCGTCCACGCTGGTGGCCTGG  <  2:3043134/150‑1                                                                                                                                                             TGA‑ACTCTGAGGGCCTTTTCACCCGAACTGAGCAATAGAAAAAACCCCGCCGAAGCGGGGTTTTCCTTGCAGGCTAGCGCTTAGATCGCGCCACGCTGACGCAGCACGTCCAGCACCTGTTTCACGCCTTCGTCCACGCTGGTGGCCTGG  <  1:2289986/150‑1                                                                                                                                                             TGA‑ACTCTGAGGGCCTTTTCACCCGAACTGAGCAATAGAAAAAACCCCGCCGAAGCGGGGTTTTCCTTGCAGGCTAGCGCTTAGATCGCGCCACGCTGACGCAGCACGTCCAGCACCTGTTTCACGCCTTCGTCCACGCTGGTGGCCTGG  <  2:171556/150‑1                                                                                                                                                             TGA‑ACTCTGAGGGCCTTTTCACCCGAACTGAGCAATAGAAAAAACCCCGCCGAAGCGGGGTTTTCCTTGCAGGCTAGCGCTTAGATCGCGCCACGCTGACGCAGCACGTCCAGCACCTGTTTCACGCCTTCGTCCACGCTGGTGGCCTGG  <  1:2913505/150‑1                                                                                                                                                                                                                                                                                                                     ATCTTGTGATCGACACCCAGGCCACCAGCGTGGACGAAGGCGTGAAACAGGTGCTGGACGTGCTGCGTCAGCGTGGCGCGATCTAAGCGCTAGCCTGCAAGGAAAACCCCGCTTCGGCGGGGTTTTTTCTATTGCTCAGTTCGGGTGAAAAGGCCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1492161‑1492317 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggccctGA‑ACTCTGAGGGCCTTTTCACCCGAACTGAGCAATAGAAAAAACCCCGCCGAAGCGGGGTTTTCCTTGCAGGCTAGCGCTTAGATCGCGCCACGCTGACGCAGCACGTCCAGCACCTGTTTCACGCCTTCGTCCACGCTGGTGGCCTGG  <  NC_002947/1492325‑1492177

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.