| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1653990 = | 102 (0.890) | 7 (0.060) | 6/234 | NT | 6.6% | coding (2821/4527 nt) | PP_1449 | hypothetical protein |
| ? | NC_002947 | 1654020 = | 100 (0.910) | coding (2791/4527 nt) | PP_1449 | hypothetical protein | |||||
GCACCTCCCAGCGTGGGGGCCGACATGACGGTCGAACACCTCAAGCGCCTGGAAAACCAGCGCCGTGGAATTGCTCAGGTCAGCGAGTTGTCCGCAGCAAAGGTCGAGGTCAAGGCTGACACACTGGCCGACCAGGGCACAGCCTGGCGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1654143‑1653990‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGTGCCATGGCGTCTTCGGGCGAAGCTT > NC_002947/1654020‑1654166 GCACCTCCCAGCGTGGGGGCCGACATGACGGTCGAACACCTCAAGCGCCTGGAAAACCAGCGCCGTGGAATTGCTCAGGTCAGCGAGTTGTCCGCAGCAAAGGTCGAGGTCAAGGCTGACACACTGGCCGACCAGGGCACAGCCTGGCGG > 2:527041/1‑150GCACCTCCCAGCGTGGGGGCCGACATGACGGTCGAACACCTCAAGCGCCTGGAAAACCAGCGCCGTGGAATTGCTCAGGTCAGCGAGTTGTCCGCAGCAAAGGTCGAGGTCAAGGCTGACACACTGGCCGACCAGGGCACAGCCTGGCGG < 2:1080091/150‑1 ACCTCCCAGCGTGGGGGCCGACATGACGGTCGAACACCTCAAGCGCCTGGAAAACCAGCGCCGTGGAATTGCTCAGGTCAGCGAGTTGTCCGCAGCAAAGGTCGAGGTCAAGGCTGACACACTGGCCGACCAGGGCACAGCCTGGCGGGC < 1:527041/150‑1 ATGACGGTCGAACACCTCAAGCGCCTGGAAAACCAGCGCCGTGGAATTGCTCAGGTCAGCGAGTTGTCCGCAGCAAAGGTCGAGGTCAAGGCTGACACACTGGCCGACCAGGGCACAGCCTGGCGGG > 1:2070951/1‑127 ATGACGGTCGAACACCTCAAGCGCCTGGAAAACCAGCGCCGTGGAATTGCTCAGGTCAGCGAGTTGTCCGCAGCAAAGGTCGAGGTCAAGGCTGACACACTGGCCGACCAGGGCACAGCCTGGCGGG < 2:2070951/127‑1 TCAAGCGCCTGGAAAACCAGCGCCGTGGAATTGCTCAGGTCAGCGAGTTGTCCGCAGCAAAGGTCGAGGTCAAGGCTGACACACTGGCCGACCAGGGCACAGCCTGGCGG < 1:549892/110‑1 TCAAGCGCCTGGAAAACCAGCGCCGTGGAATTGCTCAGGTCAGCGAGTTGTCCGCAGCAAAGGTCGAGGTCAAGGCTGACACACTGGCCGACCAGGGCACAGCCTGGCGG > 2:549892/1‑110 GCGCCGTGGAATTGCTCAGGTCAGCGAGTTGTCCGCAGCAAAGGTCGAGGTCAAGGCTGACACACTGGCCGACCAGGGCACAGCCTGGCGGGC < 1:210909/93‑1 GCGCCGTGGAATTGCTCAGGTCAGCGAGTTGTCCGCAGCAAAGGTCGAGGTCAAGGCTGACACACTGGCCGACCAGGGCACAGCCTGGCGGGC > 2:210909/1‑93 GAGGTCAAGGCTGACACACTGGCCGACCAGGGCACAGCCTGGCGGGCCAATGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTC > 1:2623887/1‑106 GAGGTCAAGGCTGACACACTGGCCGACCAGGGCACAGCCTGGCGGGCCAATGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTC < 2:2623887/106‑1 TGACACACTGGCCGACCAGGGCACAGCCTGGCGGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCAC > 1:35437/1‑150 cCACTGGCCGACCAGGGCACAGCCTGGCGGGCCAGCGTGTCAGCCTTGACCGCGACCTTTGCTGCGGACCACTCGCTGACCTGAGCAATTCCACGGCGCTCGTTTTCCAGGCGCTTGACTTGTTCGACCGCCATATCGGCCCCCACGCgg > 2:1137854/2‑148 GGCCGACCAGGGCACAGCCTGGCGGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGA > 1:964820/1‑79 GGCCGACCAGGGCACAGCCTGGCGGGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGA < 2:964820/79‑1 CGACCAGGGCACAGCCTGGCGGGCCAATGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCCTTGACCTGATCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTGCGCCCGTCATGTCGGCCCCCGCGCTGGGAGGTGC < 1:1137854/150‑1 tctGCCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTTGTTTTCCAGGCGCTTGAGGTCTTCGACCGTCATGTCGGGCTCCACGCTGGGAGGTGCCATGGCGTCTTCGGGCGAA < 1:246089/147‑1 CCAGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGATGCAATGGCTTCTTCGGGCGAAGCTT > 2:1477041/1‑150 GCACCTCCCAGCGTGGGGGCCGACATGACGGTCGAACACCTCAAGCGCCTGGAAAACCAGCGCCGTGGAATTGCTCAGGTCAGCGAGTTGTCCGCAGCAAAGGTCGAGGTCAAGGCTGACACACTGGCCGACCAGGGCACAGCCTGGCGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1654143‑1653990‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaGTGTGTCAGCCTTGACCTCGACCTTTGCTGCGGACAACTCGCTGACCTGAGCAATTCCACGGCGCTGGTTTTCCAGGCGCTTGAGGTGTTCGACCGTCATGTCGGCCCCCACGCTGGGAGGTGCCATGGCGTCTTCGGGCGAAGCTT > NC_002947/1654020‑1654166 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |