New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2458128 = | 97 (0.850) | 7 (0.060) | 7/240 | NT | 7.1% | intergenic (+157/‑48) | PP_2150/sthA | thiamine biosynthesis lipoprotein/pyridine nucleotide transhydrogenase |
? | NC_002947 | 2458159 = | 87 (0.770) | intergenic (+188/‑17) | PP_2150/sthA | thiamine biosynthesis lipoprotein/pyridine nucleotide transhydrogenase |
GACCATCGCTACCTTGCGCCCTGCTTTGGCGGCGTTCATTGCCGCGCCTTCACCGGCCGGGCCGGAACCCAGCACCACTACGTCGTAGTTGTAGACAGCCATGCGTACTCCTTCAGAACTGGCCCGCAAGCCACGGTCGCTCGCGGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2458277‑2458128 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCA > NC_002947/2458159‑2458256 GACCATCGCTACCTTGCGCCCTGCTTTGGCGGCGTTCATTGCCGCGCCTTCACCGGCCGGGCCGGAACCCAGCACCACTACGTCGTAGTTGTAGACAGCCATGCGTACTCCTTCAGAACTGGCCCGCAAGCCACGGTCGCTCGCGGGGCA > 2:1029805/1‑150 CCTGCTTTGGCGGCGTTCATTGCCGCGCCTTCACCGGCCGGGCCGGAACCCAACACCACTACGTCGTAGTTGTAGACAGCCATGCGTACTCCTTCAGAACTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCA < 1:1094660/149‑1 CCTGCTTTGGCGGCGTTCATTGCCGCGCCTTCACCGGCCGGGCCGGAACCCAACACCACTACGTCGTAGTTGTAGACAGCCATGCGTACTCCTTCAGAACTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCA > 2:1094660/1‑149 CCATGCGTACTCCTTCAGAACTGGCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTTAAGGCGCGGCAATGAACGCCGCCAAAGCA > 1:1057955/1‑150 TACTCCTTCAGAACTGGCCCGCAAGCCACGGTCGCTCGCGGGGCAGTTCTGAAGGAGTACTCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCG < 1:2647376/102‑1 TACTCCTTCAGAACTGGCCCGCAAGCCACGGTCGCTCGCGGGGCAGTTCTGAAGGAGTACTCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCG > 2:2647376/1‑102 TGGCCCGCAAGCCACGGTCGCTCGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGG < 1:1895215/98‑1 TGGCCCGCAAGCCACGGTCGATCGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGG > 2:1895215/1‑98 GACCATCGCTACCTTGCGCCCTGCTTTGGCGGCGTTCATTGCCGCGCCTTCACCGGCCGGGCCGGAACCCAGCACCACTACGTCGTAGTTGTAGACAGCCATGCGTACTCCTTCAGAACTGGCCCGCAAGCCACGGTCGCTCGCGGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2458277‑2458128 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCA > NC_002947/2458159‑2458256 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |