| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3166465 | 107 (0.930) | 10 (0.090) | 10/232 | NT | 8.1% | coding (854/1299 nt) | PP_2780 | 3‑oxoacyl‑ACP synthase |
| ? | NC_002947 | = 3166487 | 126 (1.160) | coding (876/1299 nt) | PP_2780 | 3‑oxoacyl‑ACP synthase | |||||
GCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAAT‑‑‑‑‑CACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3166313‑3166465‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgcGCCCCGGCCCTGCGGGTCGGGTGCGGTGATTTTGTAGGCATCCAGGCTGCTGCCGAAACCCAGCACTTCGGCGTACGGCGTTGCCCCTCGGGCGAGCGCCCGTTCGAGGGTTTCGAGCACGACAAAACCACCGCCCTCACCCGCAAT < NC_002947/3166487‑3166341 GCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGTGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAAT‑‑‑‑‑CAC > 2:1552346/1‑150GCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAAT‑‑‑‑‑CAC < 2:1313059/150‑1 CCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAAT‑‑‑‑‑CACC < 1:559451/150‑1 CCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTATTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAAT‑‑‑‑‑CACC < 1:965946/150‑1 GTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTTCAAGAT‑‑‑‑‑CTCCGg < 2:1442554/150‑2 CCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGATACGCTGGAACGGGCGCTCGCCCGGGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAAT‑‑‑‑‑CACCGCGCCCCGGCC > 1:1754982/1‑150 TTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAAT‑‑‑‑‑CACCGCGCCCCGGCCCTGCGGGTCGGGT > 2:293445/1‑150 ATTGCGGGTGCGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGGGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAAT‑‑‑‑‑CACCGCGCCCCGGCCCTGCGGGTCGGGTGCG < 2:1754982/150‑1 gGGGGGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAAT‑‑‑‑‑CACCGCGCCCCGGCCCTGCGGGTCGGGTGCGGTGATTTTGT < 2:2826332/149‑1 AGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACAGCACCGCGCCCCGGCCCTGCGGGTCGGGTGCGGTGAT < 2:1448377/150‑1 GGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAAT‑‑‑‑‑CACCGCGCCCCGGCCCTGCGGGTCGGGTGCGGTGATTTTGTAG < 1:293445/150‑1 GCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAAT‑‑‑‑‑CACCGCGCCCCGGCCCTGCGGGTCGGGTGCGGT > 1:2781851/1‑98 GCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAAT‑‑‑‑‑CACCGCGCCCCGGCCCTGCGGGTCGGGTGCGGT < 2:2781851/98‑1 CGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAAT‑‑‑‑‑CACCGCGCCCCGGCCCTGC < 1:2626429/81‑1 CGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAAT‑‑‑‑‑CACCGCGCCCCGGCCCTGC > 2:2626429/1‑81 ACCGCGCCCCGGCCCTGCGGGTCGGGTGCGGTGATTTTGTAGGCATCCAGGCTGCTGCCGAAACCCAGCACTTCGGCGTACGGCGTTGCCCCTCGGGCGAGCGCCCGTTCGAGGGTTTCGAGCACGACAAAA > 2:827586/1‑132 ACCGCGCCCCGGCCCTGCGGGTCGGGTGCGGTGATTTTGTAGGCATCCAGGCTGCTGCCGAAACCCAGCACTTCGGCGTACGGCGTTGCCCCTCGGGCGAGCGCCCGTTCGAGGGTTTCGAGCACGACAAAA < 1:827586/132‑1 CCGCGCCCCGGCCCTGCGGGTCGGGTGCGGTGATTTTGTAGGCATCCAGGCTGCTGCCGAAACCCAGCACTTCGGCGTACGGCGTTGCCCCTCGGGCGAGCGCCCGTTCGAGGGTTTCGAGCACGACAAAACCACCGCCCTCACCCGCAA > 2:1033471/1‑150 CGCGCCCCGGCCCTGCGGGTCGGGTGCGGTGATTTTGTAGGCATCCAGGCTGCTGCCGAAACCCAGCACTTCGGCGTACGGCGTTGCCCCTCGGGCGAGCGCCCGTTCGAGGGTTTCGAGCACGACAAAACCACCGCCCTCACCCGCgat > 1:280244/1‑147 GCGCCCCGGCCCTGCGGGTCGGGTGCGGTGATTTTGTAGGCATCCAGGCTGCTGCCGAAACCCAG < 2:2214448/65‑1 GCGCCCCGGCCCTGCGGGTCGGGTGCGGTGATTTTGTAGGCATCCAGGCTGCTGCCGAAACCCAG > 1:2214448/1‑65 GCCGTTCGATCGCCATCGCAGTGGCTTGATTGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAAT‑‑‑‑‑CACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3166313‑3166465‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgcGCCCCGGCCCTGCGGGTCGGGTGCGGTGATTTTGTAGGCATCCAGGCTGCTGCCGAAACCCAGCACTTCGGCGTACGGCGTTGCCCCTCGGGCGAGCGCCCGTTCGAGGGTTTCGAGCACGACAAAACCACCGCCCTCACCCGCAAT < NC_002947/3166487‑3166341 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |