New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3322429 = | 90 (0.790) | 6 (0.050) | 6/234 | NT | 6.3% | coding (386/972 nt) | PP_2922 | urea amidolyase‑like protein |
? | NC_002947 | 3322457 = | 92 (0.840) | coding (414/972 nt) | PP_2922 | urea amidolyase‑like protein |
CGCAACACCACCTCCCCCCCCAGGGCCTGACGCAGGGCCATGGGCAAGCTTGCACCGGCACGGGTCTTGCCGCTGGGCACGCCGACCGGCAGCAGGTCGCCCGCCATCAGTTTGCGCCCATGAAAGCCACCCAACGCGCCCAGCGCG‑TA‑GGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3322582‑3322429 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggCTTTCATGGGCGCAAACTGATGGCGGGCGACCTGCTGCCGGTCGGCGTGCCCAGCGGCAAGACCCGTGCCGGTGCAAGCTTGCCCATGGCCCTGCGTCAGGCCCTGGGGGGGGAGGTGGTGTTGCGGGTGGTGCCTGGGCTGTACTTCC > NC_002947/3322457‑3322605 CGCAACACCACCTCCCCCCCCAGGACCTGACGCAGGGCCATGGGCAAGCTTGCACCGGCACGGGTCTTGCCGCTGGGCACGCCGACCGGCAGCAGGTCGCCCGCCATCAGTTTGCGCCCATGAAAGCCACCCAACGCGCCCAGCGCG‑TA‑G > 2:1699311/1‑150 GCAACACCACCTCCCCCCCCAGGGCCTGACGCAGGGCCATGGGCAAGCTTGCACCGGCACGGGTCTTGCCGCTGGGCACGCCGACCGGCAGCAGGTCGCCCGCCATCAGTTTGCGCCCATGAAAGCCACCCAACGCGCCCAGCGCG‑TA‑GG > 1:1004179/1‑150 CAACACCACCTCCCCCCCCAGGGCCTGACGCAGGGCCATGGGCAAGCTTGCACCGGCACGGGTCTTGCCGCTGGGCACGCCGACCGGCAGCAGGTCGCCCGCCATCAGTTTGCGCCCATGAAAGCCACCCAACGCGCCCAGCGCG‑TA‑GGT < 2:681942/150‑1 ACACCACCGCCCCCCCCAGGGCCTGACGCAGGGCCCTGGGCAAGAATGCACGTGCACGGTTCTTGCCGCTGGGAAAGCCGACCGGCAGCAGGTCGCCCGCCATCAGTTTGCGCCCATGAAAGCCACCCAACGCGCCCAGCGCG‑TA‑GGTGG < 1:2217547/150‑1 CCCCCCCCAGGGCCTGACGCAGGGCCATGGGCAAGCTTGCACCGGCACGGGTCTTGCCGCTGGGCACGCCGACCGGCAGCAGGTCGCCCGCCATCAGTTTGCGCCCATGAAAGCCA‑CCTACGCGCTGGGCGCGTTG‑GGTGGCTTTCATGG < 2:2794353/150‑1 GCCATGGGCAAGCTTGCACCGGCACGGGTCTTGCCGCTGGGCACGCCGACCGGCAGCAGGTCGCCCGCCATCAGTTTGCGCCCATGAAAGCCACCCAACGCGCCCAGCGCG‑TA‑GGT > 2:2993501/1‑116 GCCATGGGCAAGCTTGCACCGGCACGGGTCTTGCCGCTGGGCACGCCGACCGGCAGCAGGTCGCCCGCCATCAGTTTGCGCCCATGAAAGCCACCCAACGCGCCCAGCGCG‑TA‑GGT < 1:2993501/116‑1 CCATGGGCAAGCTTGCACCGGCACGGGTCTTGCCGCTGGGCACGCCGACCGGCAGCAGGTCGCCCGCCATCAGTTTGCGCCCATGAAAGCCACCCAACGCGCCCAGCGCG‑TA‑GGT < 1:1955894/115‑1 CCATGGGCAAGCTTGCACCGGCACGGGTCTTGCCGCTGGGCACGCCGACCGGCAGCAGGTCGCCCGCCATCAGTTTGCGCCCATGAAAGCCACCCAACGCGCCCAGCGCG‑TA‑GGT > 2:1955894/1‑115 AGGTCGCCCGCCATCAGTTTGCGCCCATGAAAGCCACCCAACGCGCCCAGCGCG‑TA‑G < 1:1245382/57‑1 AGGTCGCCCGCCATCAGTTTGCGCCCATGAAAGCCACCCAACGCGCCCAGCGCG‑TA‑G > 2:1245382/1‑57 ATGAAAGCCACCCAACGCGCCCAGCGCG‑TA‑GGTGGCTTTCATGGGCGCAAACTGATGGCGGGCGACCTGCTGCCGGTCGGCGTGCCCAGCGGCAAGACCCGTGCCGGTGCAAGCTTGCCCATGGCCCTGCGTCAGGCCCTGGGG > 2:1586608/1‑144 ATGAAAGCCACCCAACGCGCCCAGCGCG‑TA‑GGTGGCTTTCATGGGCGCAAACTGATGGCGGGCGACCTGCTGCCGGTCGGCGTGCCCAGCGGCAAGACCCGTGCCGGTGCAAGCTTGCCCATGGCCCTGCGTCAGGCCCTGGGG < 1:1586608/144‑1 CCACCCAACGCGCCCAGCGCG‑TAGGGTGGCTTTCATGGGCGCAAACTGATGGCGGGCGACCTGCTGCCGGTCGGCGTGCCCAGCGGCAAGACCCGTGCCGGTGCAA > 2:2326164/1‑106 CCACCCAACGCGCCCAGCGCG‑TAGGGTGGCTTTCATGGGCGCAAACTGATGGCGGGCGACCTGCTGCCGGTCGGCGTGCCCAGCGGCAAGACCCGTGCCGGTGCAA < 1:2326164/106‑1 AGCGCG‑TA‑GGTGGCTTTCATGGGCGCAAACTGATGGCGGGCGACCTGCTGCCGGTCGGCGTGCCCAGCGGCAAGACCCGTGCCGGTGCAAGCTTGCCCATGGCCCTGCGTCAGGCCCTGGGGGGGGAGGTGGTGTTGCGGGTGGTGCCTG < 1:2794353/150‑1 TGGCTTTCATGGGCGCAAACTGATGGCGGGCGACCTGCTGCCGGTCGGCGTGCCCAGCGGCAAGACCCGTGCCGGTGCAAGCTTGCCCATGGCCCTGCGTCAGGCCCTGGGGGGGGAGGTGGTGTTGCGGGTGGTGCCTGGGCTGTACTT > 2:2119986/1‑150 TGGCTTTCATGGGCGCAAACTGATGGCGGGCGACCTGCTGCCGGTCGGCGTGCCCAGCGGCAAGACCCGTGCCGGTGCAAGCTTGCCCATGGCCCTGCGTCAGGCCCTGGGGGGGGAGGGGGGGTTGCGGGTGGTGCCTGGGCTGTACTT > 2:2502283/1‑150 GGCTTTCATGGGCGCAAACTGATGGCGGGCGACCTGCTGCCGGTCGGCGTGCCCAGCGGCAAGACCCGTGCCGGTGCAAGCTTGCCCATGGCCCTGCGTCAGGCCCTGGGGGGGGAGGTGGTGTTGCGGGTGGTGCCTGGGCTGTACTTC < 2:2403113/150‑1 GCTTTCATGGGCGCAAACTGATGGCGGGCGACCTGCTGCCGGTCGGCGTGCCCAGCGGCAAGACCCGTGCCGGTGCAAGCTTGCCCATGGCCCTGCGTCAGGCCCTGGGGGGGGAGGTGGTGTTGCGGGTGGTGCCTGGGCTGTACTTCC > 1:1093589/1‑150 CGCAACACCACCTCCCCCCCCAGGGCCTGACGCAGGGCCATGGGCAAGCTTGCACCGGCACGGGTCTTGCCGCTGGGCACGCCGACCGGCAGCAGGTCGCCCGCCATCAGTTTGCGCCCATGAAAGCCACCCAACGCGCCCAGCGCG‑TA‑GGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3322582‑3322429 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggCTTTCATGGGCGCAAACTGATGGCGGGCGACCTGCTGCCGGTCGGCGTGCCCAGCGGCAAGACCCGTGCCGGTGCAAGCTTGCCCATGGCCCTGCGTCAGGCCCTGGGGGGGGAGGTGGTGTTGCGGGTGGTGCCTGGGCTGTACTTCC > NC_002947/3322457‑3322605 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |