New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3542087 | 129 (1.130) | 7 (0.060) | 6/230 | NT | 5.4% | coding (679/966 nt) | galE | UDP‑glucose 4‑epimerase |
? | NC_002947 | = 3542107 | 123 (1.140) | coding (659/966 nt) | galE | UDP‑glucose 4‑epimerase |
GGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3541935‑3542087 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcatgTGGCAGACCTGGCGGCTGCCCATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCAGCAGGTGATCGATACGGCCCGGGCCGTGACCGGGCGACAGATCACT < NC_002947/3542107‑3541959 GGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGC < 1:2621870/150‑1 CGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGTCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCAT < 2:1878284/150‑1 GCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATG > 2:1193173/1‑150 GTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCA < 2:826379/136‑1 GTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCA > 1:826379/1‑136 ATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGTGGCAGACCTGGCGGCTGCCCAgg < 2:2662281/149‑3 ATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGTGGCAGACCTGGCGGCTGCCCATG > 1:2662281/1‑149 GTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGTGGCAGACCTGGCGGCTGCCCATGCACTG < 1:108395/150‑1 AAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGTGGCAGACCTGGCGGCTGCCCATGCAC < 1:1964712/103‑1 AAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGTGGCAGACCTGGCGGCTGCCCATGCAC > 2:1964712/1‑103 AGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGTGGCAGACCTGGCGGCTGCCCAT < 1:2327270/79‑1 AGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATGTGGCAGACCTGGCGGCTGCCCAT > 2:2327270/1‑79 cgtcCATGGGGCAGACCTGGCGGCTGCACACGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGGGCAGCAGGTGATCGATACGGCCCGGGCCGTGACCGGGCGACA < 1:349661/146‑1 ATGTGGCAGACCTGGCGGCTGCCCATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCAGCAGGTGATCGATACGGCCCGGGCCGTGACCGGGCGACAGATCA > 1:854195/1‑150 TGTGGCAGACCTGGCGGCTGCCCATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCAGCAGGTGATCGATACGGCCCGGGCCGTGACCGGGCGACAGATCAC > 2:2504698/1‑150 GTGGCAGACCTGGCGGCTGCCCATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCAGCAGGTGATCGATACGGCCCGGGCCGTGACCGGGCGACAGATCACT > 2:1556964/1‑150 GTGGCAGACCTGGCGGCTGCCCATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCAGCAGGTGATCGATACGGCCCGGGCCGTGACCGGGCGACAGATCACT < 1:1212788/150‑1 GGCGCGGCGCTGTGCGTCAAGGGCAGTGATCTGTCGCCCGGTCACGGCCCGGGCCGTATCGATCACCTGCTGCACCGAAAAGCCCAGGCCATTGCCCAGGTTGAACGCGGCACGCTCGCCACCGTCCAGTAGATAATCCACTGCCAGTGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3541935‑3542087 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcatgTGGCAGACCTGGCGGCTGCCCATGCACTGGCAGTGGATTATCTACTGGACGGTGGCGAGCGTGCCGCGTTCAACCTGGGCAATGGCCTGGGCTTTTCGGTGCAGCAGGTGATCGATACGGCCCGGGCCGTGACCGGGCGACAGATCACT < NC_002947/3542107‑3541959 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |