New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3569122 = | 94 (0.820) | 5 (0.050) | 5/230 | NT | 5.3% | coding (1636/1998 nt) | PP_3150 | hypothetical protein |
? | NC_002947 | 3569158 = | 89 (0.820) | coding (1672/1998 nt) | PP_3150 | hypothetical protein |
CAGCTTCGGCGCCTTGTCCCAGCGGTAACGGCTCTTGGCTTTGGCAAAGTGCTCCGGCGTGTAGCCTTTGCGCAGCATGTTGGCCACGGCGACGAACGCTTTGTCATCGCCCTTGTCCTGTTCCAGCGCCTGCCAGCTGGCATAGCGGAACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3569274‑3569122 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaacagGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTGAAGAACAT > NC_002947/3569158‑3569306 CAGCTTCGGCGCCTTGTCCCAGCGGTAACGGCTCTTGGCTTTGGCAAAGTGCTCCGGCGTGTAGCCTTTGCGCAGCATGTTGGCCACGGCGACGAACGCTTTGTCATCGCCCTTGTCCTGTTCCAGCGCCTGCCAGCTGGCATAGCGGAA < 2:1853770/150‑1 AGCTTCGGCGCCTTGTCCCAGCGGTAACGGCTCTTGGCTTTGGCAAAGTGCTCCGGCGTGTAGCCTTTGCGCAGCATGTTGGCCACGGCGACGAACGCTTTGTCATCGCCCTTGTCCTGTTCCAGCGCCTGCCAGCTGGCATAGCGGAAC < 1:1009000/150‑1 GCTTCGGCGCCTTGTCCCAGCGGTAACGGCTCTTGGCTTTGGCAAAGTGCTCCGGCGTGTAGCCTTTGCGCAGCATGTTGGCCACGGCGACGAACGCTTTGTCATCGCCCTTGTCCTGTTCCAGCGCCTGCCAGCTGGCATAGCGGAACA < 1:1180012/150‑1 GCTTCGGCGCCTTGTCCCAGCGGTAACGGCTCTTGGCTTTGGCAAAGTGCTCCGGCGTGTAGCCTTTGCGCAGCATGTTGGCCACGGCGACGAACGCTTTGTCATCGCCCTTGTCCTGTTCCAGCGCCTGCCAGCTGGCATAGCGGAACA < 2:2872721/150‑1 GCTTTGTCATCGCCCTTGTCCTGTTCCAGCGCCTGCCAGCTGGCATAGCGGAAC > 2:2894690/1‑54 GCTTTGTCATCGCCCTTGTCCTGTTCCAGCGCCTGCCAGCTGGCATAGCGGAAC < 1:2894690/54‑1 CCTGTTCCAGCGCCTGCCAGCTGGCATAGCGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTAGCGCTGGGACAAGGCGCCGAA > 1:158227/1‑150 CTGTTCCAGCGCCTGCCAGCTGGCATAGCGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCT > 1:910066/1‑133 CTGTTCCAGCGCCTGCCAGCTGGCATAGCGGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCT < 2:910066/133‑1 GCTGGCATAGCGGAACAGGACAGGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGC < 1:2661307/64‑1 GCTGGCATAGCGAAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGC > 2:2661307/1‑64 GGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAGGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTGAA < 1:1341427/150‑1 GGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTGAA < 1:2522130/150‑1 GGAACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTGAA < 2:838199/150‑1 AACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTGAAGA < 2:1716430/150‑1 ACAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTGAAGAA > 1:1169912/1‑150 CAGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTGAAGAAC > 1:2285971/1‑150 AGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTGAAGAACA < 2:1009000/150‑1 AGGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGAGAGAACGGACTGTGAccaaga > 2:2951503/1‑144 GGACAAGGGCGATCACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTGAAGAACAT < 1:2034346/150‑1 CAGCTTCGGCGCCTTGTCCCAGCGGTAACGGCTCTTGGCTTTGGCAAAGTGCTCCGGCGTGTAGCCTTTGCGCAGCATGTTGGCCACGGCGACGAACGCTTTGTCATCGCCCTTGTCCTGTTCCAGCGCCTGCCAGCTGGCATAGCGGAACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3569274‑3569122 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaacagGACAAGGGCGATGACAAAGCGTTCGTCGCCGTGGCCAACATGCTGCGCAAAGGCTACACGCCGGAGCACTTTGCCAAAGCCAAGAGCCGTTACCGCTGGGACAAGGCGCCGAAGCTGTTCCTGGGGCGAGTACGGGATGTGAAGAACAT > NC_002947/3569158‑3569306 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |