| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3622266 | 122 (1.070) | 12 (0.120) | 8/220 | NT | 9.4% | intergenic (‑186/+40) | PP_3192/PP_3193 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 3622288 | 120 (1.160) | intergenic (‑208/+18) | PP_3192/PP_3193 | hypothetical protein/hypothetical protein | |||||
CCTATGGTGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3622109‑3622266‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccttggcctgTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAAGATCCGT < NC_002947/3622288‑3622142 CCTATGGTGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCC < 2:1491217/150‑1CCTATGGTGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCC > 1:2292687/1‑150 TATGGTGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCAATTACTGCGTGAGCAGCATCCCAGGTCCTCTAGGGGGATCCGCAGCATGGGGCGACCTCGCCTT < 1:2252413/150‑1 ATGGTGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTG > 2:2285750/1‑150 ATGGTGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGAACCAAGCCGTGCAGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTG > 2:417226/1‑150 TGGTGGCCCTGGAGATTACTGGGCACAAGACGGATCTTTGCCGGGTCGGTAGCAAGGCCTGGCTGCGAGCCGCGCGCCTCGGCCATTACTGCGTCAGCATCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGG < 2:592713/150‑1 GGTGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGC > 1:235390/1‑150 GGTGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTG < 2:1673708/148‑1 GGTGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTG > 1:1673708/1‑148 GTGTCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCC > 1:2236535/1‑150 TGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGG < 1:559433/147‑1 TGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGG > 2:559433/1‑147 CCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTC > 1:1602764/1‑150 TGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTG < 1:626179/130‑1 TGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGATCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTG > 2:626179/1‑130 GACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCA < 1:1032728/150‑1 ACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCAG < 1:3005924/150‑1 ACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCAG < 2:1602764/150‑1 GGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTT > 1:229577/1‑117 GGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTT < 2:229577/117‑1 GGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTC < 2:2865299/112‑1 GGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTC > 1:2865299/1‑112 TTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGG < 1:51068/150‑1 GCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGA < 2:235390/150‑1 CCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAG < 2:1186175/150‑1 CGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCT < 1:405656/112‑1 CGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCT > 2:405656/1‑112 GGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCAG < 2:1131814/131‑1 GGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCAG > 1:1131814/1‑131 TCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGG > 2:2687391/1‑99 TCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGG < 1:2687391/99‑1 GCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCAACCTCGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCAG < 1:2366170/98‑1 GCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCAACCTCGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCAG > 2:2366170/1‑98 TGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCACGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCA > 2:1662271/1‑89 TGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCACGCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCA < 1:1662271/89‑1 GCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAA > 1:364008/1‑150 GCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGA < 1:1175126/94‑1 GCCTTGGCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGA > 2:1175126/1‑94 CCTTGGCATGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAA < 2:2229754/150‑1 TTGGCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAAGA > 1:2257433/1‑150 TGGCCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAAGAT < 2:2237349/150‑1 CCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAAGAT < 1:2525773/147‑1 CCTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAAGAT > 2:2525773/1‑147 CTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAAGATCCGT < 2:543615/150‑1 CTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAAGA > 2:2494835/1‑145 CTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGAT > 2:2106516/1‑129 CTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGAT < 1:2106516/129‑1 CTGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCATCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAAGA < 1:2494835/145‑1 TGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGA < 2:324087/56‑1 TGTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGA > 1:324087/1‑56 CCTATGGTGGCCCTGGAGAATACTGGGCACAAGACGGATCTTTGCCGGGTCGGGATCAAGGCCTGGCTGCGAGCCGCTCGCCTCGGCCATTACTGCGTCAGCAGCATCCCAGGTCCTCCAGAGGCATCCGCAGCATGGGGCGACCTCGCCTTGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3622109‑3622266‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccttggcctgTTCCACCAACAATTGGCGGAGCCAGGCCAAGGCGAGGTCGCCCCATGCTGCGGATGCCTCTGGAGGACCTGGGATGCTGCTGACGCAGTAATGGCCGAGGCGAGCGGCTCGCAGCCAGGCCTTGATCCCGACCCGGCAAAGATCCGT < NC_002947/3622288‑3622142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |