New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 4054008116 (1.010)7 (0.060) 7/230 NT 6.2% coding (538/1320 nt) PP_3573 monooxygenase
?NC_002947 = 4054033 101 (0.940)coding (563/1320 nt) PP_3573 monooxygenase

GCGTAGTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4053853‑4054008
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcgCGCATCAGCTCTTCGGCAATCTGCACGCCGGAAGAGCCG  <  NC_002947/4054033‑4053995
                                                                                                                                                                                                   
GCGTAGTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTT                                               >  2:2890493/1‑150
    AGTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGG                                           <  2:2719463/150‑1
     GTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGC                                          <  2:1533157/150‑1
     GTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGC                                          <  2:2281514/150‑1
                                       TCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCATCAGCTCTTCGGCAATCTGCACGCCGGAA        <  1:1771051/150‑1
                                          CGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCATCAGCTCTTCGGCAATCTGCACGCCGGAAGAG     <  2:706545/150‑1
                                             CCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCACTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCGTCCGGCGCGCATCAGCTCTTCGGCAATCTGCACGCCGGAAGAGCCG  <  2:1824922/150‑1
                                               ATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCCTCAGCTCTTCGGCAATCTGCAC               <  2:906351/135‑1
                                               ATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCATCAGCTCTTCGGCAATCTGCAC               >  1:906351/1‑135
                                                                                                    CCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCATCAGCTCTTCGGCAATCTGCACGCC            >  1:152689/1‑85
                                                                                                    CCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCGCGCATCAGCTCTTCGGCAATCTGCACGCC            <  2:152689/85‑1
                                                                                                                                                                                                   
GCGTAGTCGCCGCCACCGGCCCGTTCCAGAAACCGGTGATCCCGGCCATCGCGCCGAAAGACAGCAACCTGCACCAGATTCATTCCGCCGCTTACTTCAACCCAGAGCAGTTGCCTGAAGGCGCGGTACTGGTGGTCGGTGCCGGCTCTTCCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4053853‑4054008
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcgCGCATCAGCTCTTCGGCAATCTGCACGCCGGAAGAGCCG  <  NC_002947/4054033‑4053995

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.