New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4254384 | 93 (0.810) | 6 (0.050) | 5/240 | NT | 6.0% | coding (1788/2253 nt) | PP_3728 | two‑component system sensor histidine kinase/response regulator |
? | NC_002947 | = 4254434 | 95 (0.840) | coding (1738/2253 nt) | PP_3728 | two‑component system sensor histidine kinase/response regulator |
GAGCAATGACCAGTCCATGTCTGCGCCAGCGCTGGCCACTTCACCGGGCGCTACGTCAGCCAACGCCTTGCGCAGGCTGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4254234‑4254384 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcTCGCCGGGGCCGAACCGCCACAGTCGGATCCTGGCGCTGACGGCCGGCGTGCAAC < NC_002947/4254434‑4254380 GAGCAATGACCAGTCCATGTCTGCGCCAGCGCTGGCCACTTCACCGGGCGCTACGTCAGCCAACGCCTTGCGCAGGCTGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTG > 1:1959469/1‑150 CAGCGCTGGCCACTTCACCGGGCGCTACGTCAGCCAACGCCTTGCGCAGGCTGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCTCGCCGGGGCCGAACCGCCACAGTC > 1:2434013/1‑150 CAGCCAACGCCTTGCGCAGGCTGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCTCGCCGGGGCCGAACCGCCACAGTCGGATCCTGGCGCTGACGGCCGGCGTGCAAC < 2:2434013/150‑1 CCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCTCGCCGGGGCCGAACCGCCACAGTCGGATCCTGGCGCTGACGGCCGGCGTGC < 1:895150/119‑1 CCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCTCGCCGGGGCCGAACCGCCACAGTCGGATCCTGGCGCTGACGGCCGGCGTGC > 2:895150/1‑119 CCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGGGCCGAACCGCCACAGTCGGATCCTGGCGCTGACGGCCGGCGTGCAAC > 1:2058105/1‑99 CCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGCACGCCGGGGCCGAACCGCCACAGTCGGATCCTGGCGCTGACGGCCGGCGTGCAAC < 2:2058105/99‑1 GAGCAATGACCAGTCCATGTCTGCGCCAGCGCTGGCCACTTCACCGGGCGCTACGTCAGCCAACGCCTTGCGCAGGCTGTCCAGCCGCAACGGCTTGGCCAGTACGCCCTGCATACCAGCGTCCAGATAACCCGCGACCTGGCCCGGTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4254234‑4254384 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcTCGCCGGGGCCGAACCGCCACAGTCGGATCCTGGCGCTGACGGCCGGCGTGCAAC < NC_002947/4254434‑4254380 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |