| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4533612 = | 108 (0.940) | 11 (0.110) | 10/220 | NT | 11.0% | intergenic (+10/‑164) | PP_4020/cpo | oxidoreductase/non‑heme chloroperoxidase |
| ? | NC_002947 | 4533701 = | 81 (0.780) | intergenic (+99/‑75) | PP_4020/cpo | oxidoreductase/non‑heme chloroperoxidase | |||||
GTGTCTCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4533771‑4533612‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacaggcaacacAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGGTGA > NC_002947/4533701‑4533848 GTGTCTCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCAACTGGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCA > 1:2493763/1‑150 GTCTCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCATCCGCGAAGAGGCCCGCACA > 2:1157956/1‑150 TCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGC < 1:999344/150‑1 TCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGC > 1:3018013/1‑150 TCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGC > 2:195242/1‑150 TCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGC < 1:195242/150‑1 TCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGC > 1:2017787/1‑150 CTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAA > 2:1583477/1‑150 CTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGCTGCACTTGAGCTCGGACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAA > 2:1617724/1‑150 TTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACAC < 1:2407165/127‑1 TTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACAC > 2:2407165/1‑127 AGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACA < 1:19400/96‑1 AGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACA > 2:19400/1‑96 GCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGA > 2:1011115/1‑150 GCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCA > 1:2598159/1‑150 CTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAA > 1:1877676/1‑94 CTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAA < 2:1877676/94‑1 TCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTCTTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGA > 1:958238/1‑150 TCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGA < 1:1011115/150‑1 TCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATT < 1:1289109/104‑1 TCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATT > 2:1289109/1‑104 GCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTAT > 1:1275936/1‑150 GGTGAACCCGCTCCTACACTGTGGGGTCCCTTTCACCCGCGAAGAGGCCCGCACA > 1:754539/1‑55 GGTGAACCCGCTCCTACACTGTGGGGTCCCTTTCACCCGCGAAGAGGCCCGCACA < 2:754539/55‑1 CTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACG < 2:2598159/150‑1 CACCCGCGAAGAGGCCCGCACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAG < 2:1275936/150‑1 GGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCAC > 2:1522880/1‑150 GCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACC > 2:604889/1‑150 AACACAACTTCCTGATACCCGCCAAAATCCCTCCTCTTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGG < 2:958238/150‑1 AACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGG > 1:2819657/1‑150 AACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGACCGCGCGATGCACCGG > 1:1808370/1‑150 ACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGGT > 2:2458839/1‑150 ACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGGTGA < 2:10600/150‑1 GTGTCTCCTGGGTGCAGGAAGCGAAGGGAGCTATTGAGAATAGGAGGGATTTTGGCGGGTATCAGGAAGTTGTGTTGCCTGTGTGGGCCTCTTCGCAGGTGAACCCGCTCCTACACTGTGAGGTCCCTTTCACCCGCGAAGAGGCCCGCACAGGCAACAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4533771‑4533612‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacaggcaacacAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACACGACCATGAGCTATGTAACCACGAAGGACGGCGTACAGATCTTCTACAAGGACTGGGGCCCGCGCGATGCACCGGTGA > NC_002947/4533701‑4533848 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |