New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4717770	83 (0.730)	5 (0.050)	5/230	NT	5.8%	coding (289/1221 nt)	fabB	3‑oxoacyl‑ACP synthase
	?	NC_002947	= 4717784	83 (0.770)					coding (303/1221 nt)	fabB	3‑oxoacyl‑ACP synthase

GTAGCCAGGTTTCCGGGTCCATCGACCTCAACCTCGAAGAACTGATCGACCGCAAGGTTTACCGCTTCGTCGGCCATGCGGCTGCCTACGCCTACCTGGCCATGCAGGACGCGATCAAGGACGCTGGCCTGACCGAAGAGCAGGTTTCCAACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4717615‑4717770 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgcCACCAGGCCGGTACGCGGGTTGGAAACCTGCTCTTCGGTCAGGCCAGCGTCCTTGATCGCGTCCTGCATGGCCAGGTAGGCGTAGGCAGCCGCATGGCCGACGAAGCGGTAAACCTTGCGGTCGATCAGTTCTTCGAGGTTGAGGTCG  <  NC_002947/4717784‑4717637                                                                                                                                                                                                                                                                                                                  GTAGCCAGGTTTCCGGGTCCATCGACCTCAACCTCGAAGAACTGATCGACCGCAAGGTTTACCGCTTCGTCGGCCATGCGGCTGCCTACGCCTACCTGGCCATGCAGGACGCGATCAAGGACGCTGGCCTGACCGAAGAGCAGGTTTCCA                                                                                                                                                            >  2:2645207/1‑150      CAGGTTTCCGGGTCCATCGACCTCAACCTCGAAGAACTGATCGACCGCAAGGTTTACCGCTTCGTCGGCCATGCGGCTGCCTACGCCTACCTGGCCATGCAGGACGCGATCAAGGACGCTGGCCTGACCGAAGAGCAGGTTTCCAACCCG                                                                                                                                                       >  2:915883/1‑150      CAGGTTTCCGGGTCCATCGACCTCAACCTCGAAGAACTGATCGACCGCAAGGTTTACCGCTTCGTCGGCCATGCGGCTGCCTACGCCTACCTGGCCATGCAGGACGCGATCAAGGACGCTGGCCTGACCGAAGAGCAGGTTTCCAACCCG                                                                                                                                                       >  2:2754360/1‑150      CAGGTTTCCGGGTCCATCGACCTCAACCTCGAAGAACTGATCGACCGCAAGGTTTACCGCTTCGTCGGCCATGCGGCTGCCTACGCCTACCTGGCCATGCAGGACGCGATCAAGGACGCTGGCCTGACCGAAGAGCAGGTTTCCAACCCG                                                                                                                                                       >  1:769006/1‑150                          CCTCAACCTCGAAGAACTGATCGACCGCAAGGTTTACCGCTTCGTCGGCCATGCGGCTGCCTACGCCTACCTGGCCATGCAGGACGCGATCAAGGACGCTGGCCTGACCGAAGAGCAGGTTTCCAACCCGCCACCAGGCCGGTACGCGGG                                                                                                                                   <  2:529614/150‑1                            TCAACCTCGAAGAACTGATCGACCGCAAGGTTTACCGCTTCGTCGGCCATGCGGCTGCCTACGCCTACCTGGCCATGCAGGACGCGATCAAGGACGCTGGCCTGACCGAAGAGCAGGTTTCCAACCC                                                                                                                                                        <  1:1529322/127‑1                            TCAACCTCGAAGAACTGATCGACCGCAAGGTTTACCGCTTCGTCGGCCATGCGGCTGCCTACGCCTACCTGGCCATGCAGGACGCGATCAAGGACGCTGGCCTGACCGAAGAGCAGGTTTCCAACCC                                                                                                                                                        >  2:1529322/1‑127                                                                           CATGCGGCTGCCTACGCCTACCTGGCCATGCAGGACGCGATCAAGGACGCTGGCCTGACCGAAGAGCAGGTTTCCAACCCGCCACCAGGCCGGTACGCGGGTTGGA                                                                                                                              <  1:77813/106‑1                                                                           CATGCGGCTGCCTACGCCTACCTGGCCATGCAGGACGCGATCAAGGACGCTGGCCTGACCGAAGAGCAGGTTTCCAACCCGCCACCAGGCCGGTACGCGGGTTGGA                                                                                                                              >  2:77813/1‑106                                                                                     CCTACGCCTACCTGGCCATGCAGGACGCGATCAAGGACGCTGGCCTGACCGAAGAGCAGGTTTCCAACCCGCCACCAGGCCGGTACGCGGGTT                                                                                                                                 >  2:2082003/1‑93                                                                                     CCTACGCCTACCTGGCCATGCAGGACGCGATCAAGGACGCTGGCCTGACCGAAGAGCAGGTTTCCAACCCGCCACCAGGCCGGTACGCGGGTT                                                                                                                                 <  1:2082003/93‑1                                                                                                                                                      aaacgGCCACCAGGCCGGCACGGGGGTTGGAAACCTGCTCTTCGGTCAGGCCAGCGTCCTTGATCGCGTCCTGCATGGCCAGGTAGGCGTAGGCAGCCGCATGGCCGACGAAGCGGTAAACCTTGCGGTCGATCAGTTCTTCGAGGTTGA       <  1:2310088/145‑1                                                                                                                                                       ACCCGCCACCAGGCCGGTACGCGGGTTGGAAACCTGCTCTTCGGTCAGGCCAGCGTCCTTGATCGCGTCCTGCATGGCCAGGTAGGCGTAGGCAGCCGCATGGCCGACGAAGCGGTAAACCTTGCGGTCGATCAGTTCTTCGAGGTTGAG      <  1:2426628/150‑1                                                                                                                                                       ACCCGCCACCAGGCCGGTACGCGGGTTGGAAACCTGCTCTTCGGTCAGGCCAGCGTCCTTGATCGCGTCCTGCATGGCCAGGTAGGCGTAGGCAGCCGCATGGCCGACGAAGCGGTAAACCTTGCGGTCGATCAGTTCTTCGAGGTTGAG      <  2:73475/150‑1                                                                                                                                                         CCGCCACCAGGCCGGTACGCGGGTTGGAAACCTGCTCTTCGGTCAGGCCAGCGTCCTTGATCGCGTCCTGCATGGCCAGGTAGGCGTAGGCAGCCGCATGGCCGACGAAGCGGTAAACCTTGCGGTCGATCAGTTCTTCGAGGTTGAGGT    >  1:2053335/1‑150                                                                                                                                                         CCGCCACCAGGCCGGTACGCGGGTTGGAAACCTGCTCTTCGGTCAGGCCAGCGTCCTTGATCGCGTCCTGCATGGCCAGGTAGGCGTAGGCAGCCGCATGGCCGACGAAGCGGTAAACCTTGCGGT                            >  2:1349407/1‑126                                                                                                                                                         CCGCCACCAGGCCGGTACGCGGGTTGGAAACCTGCTCTTCGGTCAGGCCAGCGTCCTTGATCGCGTCCTGCATGGCCAGGTAGGCGTAGGCAGCCGCATGGCCGACGAAGCGGTAAACCTTGCGGT                            <  1:1349407/126‑1                                                                                                                                                          CGCCACCAGGCCGGTACGCGGGTTGGAAACCTGCTCTTCGGTCAGGCCAGCGTCCTTGATCGCGTCCTGCATGGCCAGGTAGGCGTAGGCAGCCGCATGGCCGACGAAGCGGTAAACCTTGCGGTCGATCAGTTCTTCGAGGTTGAGGTC   >  1:577968/1‑150                                                                                                                                                          CGCCACCAGGCCGGTACGCGGGTTGGAAACCTGCTCTTCGGTCAGGCCAGCGTCCTTGATC                                                                                            <  2:2118416/61‑1                                                                                                                                                          CGCCACCAGGCCGGTACGCGGGTTGGAAACCTGCTCTTCGGTCAGGCCAGCGTCCTTGATC                                                                                            >  1:2118416/1‑61                                                                                                                                                           GCCACCAGGCCGGTACGCGGGTTGGAAACCTGCTCTTCGGTCAGGCCAGCGTCCTTGATCGCGTCCTGCATGGCCAGGTAGGCGTAGGCAGCCGCATGGCCGACGAAGCGGTAAACCTTGCGGTCGATCAGTTCTTCGAGGTTGAGGTCG  >  2:3068453/1‑150                                                                                                                                                           GCCACCAGGCCGGTACGCGGGTTGGAAACCTGCTCTTCGGTCAGGCCAGCGTCCTTGATCGCGTCCTGCATGGCCAGGTAGGCGTAGGCAGCCGCATGGCCGACGAAGCGGTAAACCTTGCGGTCGATCAGTTCTTC               <  1:2285408/137‑1                                                                                                                                                           GCCACCAGGCCGGTACGCGGGTTGGAAACCTGCTCTTCGGTCAGGCCAGCGTCCTTGATCGCGTCCTGCATGGCCAGGTAGGCGTAGGCAGCCGCATGGCCGACGAAGCGGTAAACCTTGCGGTCGATCAGTTCTTC               >  2:2285408/1‑137                                                                                                                                                                                                                                                                                                                  GTAGCCAGGTTTCCGGGTCCATCGACCTCAACCTCGAAGAACTGATCGACCGCAAGGTTTACCGCTTCGTCGGCCATGCGGCTGCCTACGCCTACCTGGCCATGCAGGACGCGATCAAGGACGCTGGCCTGACCGAAGAGCAGGTTTCCAACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4717615‑4717770 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgcCACCAGGCCGGTACGCGGGTTGGAAACCTGCTCTTCGGTCAGGCCAGCGTCCTTGATCGCGTCCTGCATGGCCAGGTAGGCGTAGGCAGCCGCATGGCCGACGAAGCGGTAAACCTTGCGGTCGATCAGTTCTTCGAGGTTGAGGTCG  <  NC_002947/4717784‑4717637

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.