New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5385875 | 91 (0.790) | 5 (0.050) | 5/234 | NT | 5.2% | coding (558/1146 nt) | lldD | L‑lactate dehydrogenase |
? | NC_002947 | = 5385891 | 96 (0.870) | coding (574/1146 nt) | lldD | L‑lactate dehydrogenase |
CTTCATGCGCAATGCCCTGGAGCGCGCCAAGGCCGCCGGCGTCAAGACCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCCCGCTACCGCGACGCCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5385722‑5385875 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatgCCCACTCGGGGTGGGTCATGGCTTGCAGCACGCGGCGCAGCGGGCCGTTCTTGCCGCTCATGCCAGAGTGGGCGTCGCGGTAGCGGGCACCGGGTACGGGCATGTCCACGGTGAACACCAGGGTCTTGACGCCGGCGGCCTTGGCGCGC < NC_002947/5385891‑5385743 CTTCATGCGCAATGCCCTGGAGCGCGCCAAGGCCGCCGGCGTCAAGACCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCCCGCTACCGCGACGCCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGC > 1:958445/1‑150 CATGCGCAATGCCCTGGAGCGCGCCAAGGCCGCCGGCGTCAAGACCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCCCGCTACCGCGACGCCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCAT < 2:2068138/150‑1 ATGCGCAATGCCCTGGAGCGCGCCAAGGCCGCCGGCGTCAAGACCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCCCGCTACCGCGACGCCCACTCTGGCATGAGCGGCAATAACGGCCCGCTGCGCCGCGTGCTGCAAGCCATG > 1:2449327/1‑150 CAATGCCCTGGAGCGCGCCAAGGCCGCCGGCGTCAAGACCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCCCGCTACCGCGACGCCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCATG < 1:2742419/145‑1 CAATGCCCTGGAGCGCGCCAAGGCCGCCGGCGTCAAGACCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCCCGCTACCGCGACGCCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCATG > 2:2742419/1‑145 CTGGAGCGCACAACGGCGACCAGCGTGAAGATCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCAGGCTACCGCGACGCCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCATGCCCACTCGGGGT < 1:2204968/150‑1 CGCCGGCGTCAAGACCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCCCGCTACCGCGACGCCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCAT > 1:2854163/1‑120 CGCCGGCGTCAAGACCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCCCGCTACCGCGACGCCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCAT < 2:2854163/120‑1 CCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCATGCCCACTCGGGGTGGGTCATGGC < 1:2853184/78‑1 CCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCATGCCCACTCGGGGTGGGTCATGGC > 2:2853184/1‑78 GGCCCGCTGCGCCGCGTGCTGCAAGCCATGCCCACTCGGGGTGGGTCAT > 1:1434956/1‑49 GGCCCGCTGCGCCGCGTGCTGCAAGCCATGCCCACTCGGGGTGGGTCAT < 2:1434956/49‑1 CCATGCCCACTCGGGGTGGGTCATGGCTTGCAGCACGCGGCGCAGCGGGCCGTTCTTGCCGCTCATGCCAGAGTGGGCGTCGCGGTAGCGGGCACCGGGTACGGGCATGTCCACGGTGAACACCAGGGTCTTGACGCCGGCGGCCTTGGC > 1:2798122/1‑150 CCATGCCCACTCGGGGTGGGTCATGGCTTGCAGCACGCGGCGCAGCGGGCCGTTCTTGCCGCTCATGCCAGAGTGGGCGTCGCGGTAGCGGGCACCGGGTACGGGCATGTCCACGGTGAACACCAGGGTCTTGACGCCGGCGGCCTTGGC < 2:527623/150‑1 CATGCCCACTCGGGGTGGGTCATGGCTTGCAGCACGCGGCGCAGCGGGCCGTTCTTGCCGCTCATGCCAGAGTGGGCGTCGCGGTAGCGGGCACCGGGTACGGGCATGTCCACGGTGAACACCAGGGTCTTGACGCCGGCGGCCTTGGCG > 2:817601/1‑150 ATGCCCACTCGGGGTGGGTCATGGCTTGCAGCACGCGGCGCAGCGGGCCGTTCTTGCCGCTCATGCCAGAGTGGGCGTCGCGGTAGCGGGCACCGGGTACGGGCATGTCCACGGTGAACACCAGGGTCTTGACGCCGGCGGCCTTGGCGC > 2:788702/1‑150 ATGCCCACTCGGGGTGGGTCATGGCTTGCAGCACGCGGCGCAGCGGGCCGTTCTTGCCGCTCATGCCAGAGTGGGCGTCGCGGTAGCGGGCACCGGGTACGGGCATGTCCACGGTGAACACCAGGGTCTTGACGCCGGCGGCCTTGGCGC < 1:1106730/150‑1 GCCCACTCGGGGTGGGTCATGGCTTGCAGCACGCGGCGCAGCGGGCCGTTCTTGCCGCTCATGCCAGAGTGGGCGTCGCGGTAGCGGGCACCGGGTACGGGCATGTCCACGGTGAACACCAGGGTCTTGACGCCGGCGGCCTTGGCGCGC < 2:1029244/150‑1 CTTCATGCGCAATGCCCTGGAGCGCGCCAAGGCCGCCGGCGTCAAGACCCTGGTGTTCACCGTGGACATGCCCGTACCCGGTGCCCGCTACCGCGACGCCCACTCTGGCATGAGCGGCAAGAACGGCCCGCTGCGCCGCGTGCTGCAAGCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5385722‑5385875 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatgCCCACTCGGGGTGGGTCATGGCTTGCAGCACGCGGCGCAGCGGGCCGTTCTTGCCGCTCATGCCAGAGTGGGCGTCGCGGTAGCGGGCACCGGGTACGGGCATGTCCACGGTGAACACCAGGGTCTTGACGCCGGCGGCCTTGGCGCGC < NC_002947/5385891‑5385743 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |