| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5537079 = | 25 (0.220) | 19 (0.210) | 11/190 | NT | 45.0% | intergenic (+8/+95) | nadE/PP_4870 | NH(3)‑dependent NAD(+) synthetase/azurin |
| ? | NC_002947 | 5537155 = | 27 (0.300) | intergenic (+84/+19) | nadE/PP_4870 | NH(3)‑dependent NAD(+) synthetase/azurin | |||||
AAGCCGGTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5537253‑5537079‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcgcgggtgaacccgctcctgcaggGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTTTCTCAGGCGCGCC > NC_002947/5537155‑5537302 AAGCCGGTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTAT > 1:887457/1‑150 CGGTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGC < 1:1626887/150‑1 GTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG < 2:2128366/150‑1 GTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG < 2:2496847/150‑1 GTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG < 2:870366/150‑1 GTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG < 1:1645856/150‑1 GTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG < 1:1890428/150‑1 GTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG < 1:93520/150‑1 GTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGG < 1:2318497/150‑1 TGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGG < 2:2046986/150‑1 TGGTGACTACAGCTCCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGG < 1:464194/150‑1 GGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGT < 2:887457/150‑1 GACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAGGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAA < 1:336480/150‑1 GACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCGCGAATACGAGGGTGAA < 2:338314/150‑1 TACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCC > 2:2782640/1‑150 TACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAAC < 1:1362870/148‑1 TACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGCTCACCCTCGTATTCGCGGGTGAAC > 2:1362870/1‑148 CAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGC > 1:445421/1‑150 CAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCAGCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCGCCCTCGTATTCGCCGGGGAACCCGC > 2:1201305/1‑150 TCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTG < 2:445421/150‑1 CTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCCAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGACCCCGCTCCTGC < 2:2177044/150‑1 GATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAG > 2:746218/1‑125 GATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAG < 1:746218/125‑1 CCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTTCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCA > 2:2736906/1‑150 CCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAG > 2:258989/1‑126 CCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAG < 1:258989/126‑1 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCAC > 1:2139477/1‑150 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCAC > 2:2505798/1‑150 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCAC > 2:2272037/1‑150 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAG < 2:796038/137‑1 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAG > 1:796038/1‑137 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATC < 1:879917/104‑1 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATC > 2:879917/1‑104 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCA < 1:414290/102‑1 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCA > 2:414290/1‑102 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGA > 1:1277809/1‑76 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGA < 2:1277809/76‑1 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTT > 2:1541110/1‑74 CCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTT < 1:1541110/74‑1 CGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCTTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTG < 2:1294243/114‑1 CGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTG > 1:1294243/1‑114 CCTCGTATTCGCGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGA > 1:872079/1‑150 CGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCA > 2:2717667/1‑95 CGGGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCA < 1:2717667/95‑1 GGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCGAAATCCTGGCCGAGCTGGGAAGTGTCGAACTTCACCTCGGT > 2:1022857/1‑150 GGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTG < 2:2761866/91‑1 GGTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTG > 1:2761866/1‑91 GTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATC > 1:325860/1‑69 GTGAACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATC < 2:325860/69‑1 ACCCGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTT < 2:2138397/150‑1 CGCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTTTCT > 1:2748086/1‑150 GCTCCTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAAGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTTTCTC < 1:870366/150‑1 CTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTTTCTCAGGC < 2:616904/150‑1 CTGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTTTCTCAGGC < 1:2046986/150‑1 TGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTTTCTCAGGag > 1:118556/1‑148 TGCAGGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTTTCTCAGGCG > 2:243016/1‑150 GGGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTTTCTCAGGCGCGCC < 1:2505798/150‑1 AAGCCGGTGGTGACTACAGCTTCTTCTGCACCTTCCCGGGCCACATCTCGATGATGAAAGGCAAGGTCATCGTCAAGTAATCAAAGGCTGACGGCGAACCCTGCAGGAGCGGGTTCACCCGCGAATGCGTCGGTGGGTTCACCCTCGTATTCGCGGGTGAACCCGCTCCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5537253‑5537079‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attcgcgggtgaacccgctcctgcaggGTTCGCCGTCAGCCTTTGATTACTTGACGATGACCTTGCCTTTCATCATCGAGATGTGGCCCGGGAAGGTGCAGAAGAAGCTGTAGTCACCACCGGCTTCCAGCTTGGAAGTGTCGAACTTCACTTCGGTTTCTTTCTCAGGCGCGCC > NC_002947/5537155‑5537302 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |