| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5614190 | 124 (1.080) | 10 (0.090) | 9/228 | NT | 7.8% | coding (1383/1422 nt) | hldE | bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase |
| ? | NC_002947 | = 5614195 | 121 (1.130) | coding (1378/1422 nt) | hldE | bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase | |||||
GCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5614036‑5614190‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtcgagAACAGCTCGACCACGGCGATTGTCGAGAAAATTCGCAAGAACTGATCTGACCTTGGGGTCGCTTCGGCGGCCCTCTGCTGGGGCGGGTTTACCCGCTCCAGCAAGCAGGTGAAAGCTTTCGGGATGTCACTTGTTCAGCGAGGACCG < NC_002947/5614195‑5614049 GCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGG < 2:2259695/150‑1 CTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGT < 1:1676421/150‑1 gGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTC < 2:2528072/149‑1 TGGAGCGGGCGCGGTCCTCGGTGAACAAGTGACATCCCGAAAGCTTCCACCTGCTTGCGGGAGCGGGTAATCCCGCCCCAGTAGAGGGCCGCCGAAGCGACCCCAAGGTCAGAGTAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTC < 2:350655/150‑1 TGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATGAGTTGTTGCGAATTTTCTCGACAATCGCCGTGGTC > 2:2545577/1‑150 GCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGAACAG > 1:2525047/1‑150 CTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGAACAGCTCGACCA < 2:2525047/150‑1 CTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGAACAGCTCGA < 2:1793688/147‑1 CTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGAACAGCTCGA > 1:1793688/1‑147 GAACAAGTAACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGCGGTCGAGAACAGCTCGACCACGGCGA < 2:950473/150‑1 CCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGAACAGCTCGACCA > 1:699160/1‑130 CCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGAACAGCTCGACCA < 2:699160/130‑1 CCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGAACAGCTCGACCACG < 1:2816112/66‑1 CCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAGAACAGCTCGACCACG > 2:2816112/1‑66 TTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCACGGCGATTGTCGAGAAAATTCGCAAGAACTGATCTGACCTTGGGGTCGCTTCGGCGGCCCTCTGCTGGGGCGGGTTTACCCGCTCCAGCAAGCAGGTGAAAGCTTT < 2:1478505/143‑1 TTCTCGACAATCGCCGTGGTCGAGCTGTTCTCGACCACGGCGATTGTCGAGAAAATTCGCAAGAACTGATCTGACCTTGGGGTCGCTTCGGCGGCCCTCTGCTGGGGCGGGTTTACCCGCTCCAGCAAGCAGGTGAAAGCTTT > 1:1478505/1‑143 GTGGTTGAGAACCGCTCGACCATGGCGATTGTCGAGAAAATTCGCAAGCTCTGATCTGACCTTGGGGTCGCTGCGGCGGCCCTCTGGTGGGGCGCGTTTACCCGCTCCAGCAAGCAGGTGAAAGCTTTCGGGATGTCACTTGTTCAGCGA < 1:2474501/150‑1 TGGTCGAGAACAGCTCGACCACGGCGATTGTCGAGAAAATTCGCAAGAACTGATCTGACCTTGGGGTCGCTTCGGCGGCCCTCTGCTGGGGCGGGTTTACCCGCTCCAGCAAGCAGGT < 2:2327679/118‑1 TGGTCGAGAACAGCTCGACCACGGCGATTGTCGAGAAAATTCGCAAGAACTGATCTGACCTTGGGGTCGCTTCGGCGGCCCTCTGCTGGGGCGGGTTTACCCGCTCCAGCAAGCAGGT > 1:2327679/1‑118 GTCGAGAACAGCTCGACCACGGCGATTGTCGAGAAAATTCGCAAGAACTGATCTGACCTTGGGGTCGCTTCGGCGGCCCTCTGCTGGGGCGGGTTTACCCGCTCCAGCAAGCAGGTGAAAGCTTTCGGGATGTCACTTGTT < 2:2406582/141‑1 GTCGAGAACAGCTCGACCACGGCGATTGTCGAGAAAATTCGCAAGAACTGATCTGACCTTGGGGTCGCTTCGGCGGCCCTCTGCTGGGGCGGGTTTACCCGCTCCAGCAAGCAGGTGAAAGCTTTCGGGATGTCACTTGTT > 1:2406582/1‑141 GTCGAGAACAGCTCGACCACGGCGATTGTCGAGAAAATTCGCAAGAACTGATCTGACCTTGGGGTCGCTTCGGCGGCCCTCTGCTGGGGCGGGTTTAC > 2:2713691/1‑98 GTCGAGAACAGCTCGACCACGGCGATTGTCGAGAAAATTCGCAAGAACTGATCTGACCTTGGGGTCGCTTCGGCGGCCCTCTGCTGGGGCGGGTTTAC < 1:2713691/98‑1 CGAGAACAGCTCGACCACGGCGATTGTCGAGAAAATTCGCAAGAACTGATCTGACCTTGGGGTCGCTTCGGCGGCCCTCTGCTGGGGCGGGTTTACCCGCTCCAGCAAGCAGGTGAAAGCTTTCGGGATGTCACTTGTTCAGCGAGGACC < 1:2298883/150‑1 GAGAACAGCTCGACCACGGCGATTGTCGAGAAAATTCGCAAGAACTGATCTGACCTTGGGGTCGCTTCGGCGGCCCTCTGCTGGGGCGGGTTTACCCGCTCCAGCAAGCAGGTGAAAGCTTTCGGGATGTCACTTGTTCAGCGAGGACCG > 2:2997061/1‑150 GAACAGCTCGACCACGGCGATTGTCGAGAAAATTCGCAAGAACTGAT > 1:2139400/1‑47 GAACAGCTCGACCACGGCGATTGTCGAGAAAATTCGCAAGAACTGAT < 2:2139400/47‑1 GCTGGAGCGGGCGCGGTCCTCGCTGAACAAGTGACATCCCGAAAGCTTTCACCTGCTTGCTGGAGCGGGTAAACCCGCCCCAGCAGAGGGCCGCCGAAGCGACCCCAAGGTCAGATCAGTTCTTGCGAATTTTCTCGACAATCGCCGTGGTCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5614036‑5614190‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtcgagAACAGCTCGACCACGGCGATTGTCGAGAAAATTCGCAAGAACTGATCTGACCTTGGGGTCGCTTCGGCGGCCCTCTGCTGGGGCGGGTTTACCCGCTCCAGCAAGCAGGTGAAAGCTTTCGGGATGTCACTTGTTCAGCGAGGACCG < NC_002947/5614195‑5614049 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |