| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5631226 | 117 (1.020) | 6 (0.060) | 6/226 | NT | 5.2% | coding (705/3954 nt) | putA | proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase |
| ? | NC_002947 | = 5631237 | 111 (1.050) | coding (716/3954 nt) | putA | proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase | |||||
TCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACCCATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5631069‑5631226‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcatcggcTCGCCGCTCTTGCCGATGATGCGGGTGAGCGAGGAGGTGAGGCCGGTTTCGTTATGGGTGCTGACCAGCTTGCCGGTCAGCAGCAGCCCCCAGGTGGCGGCGTTGACGAACAGTGACGGGCTGTTGCCCAGGTGCGGCTGCCA < NC_002947/5631237‑5631095 TCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACCCATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCA > 2:2012361/1‑150 GACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACCCATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATC > 2:1205744/1‑150 GACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACCCATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATC < 1:879701/150‑1 GACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACCCATAACGAAACCGCCCTCACCTCCTCGCTCACCCGCATCATC > 2:538921/1‑150 AAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACCCATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGC > 1:1879902/1‑150 CAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACCCATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGCTCGCCGCTCTTGCC < 2:1873599/150‑1 CTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCAACCTGGGGGATCCTTGTTACCGGCAAGCTGGTCAGCACCCATAACGAAACCGCCCTCACCTCCTCGCTCACCCGCATCATCGGCTCGCCGCTCTTGCCGATGATGCGGGTGAGC < 1:2967955/150‑1 AACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACCCATAACGAAACCGGCCTCAGCTCCTCGCTCACCCGCATCATCGGCTCGCCGCTCTTGCCGATGATGCGGGTGAGCGA > 1:1322336/1‑125 AACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACCCATAACGAAACCGGCCTCAGCTCCTCGCTCACCCGCATCATCGGCTCGCCGCTCTTGCCGATGATGCGGGTGAGCGA < 2:1322336/125‑1 TGCTGACCGGCAAGCTGGTCAGCACCCATAACGAAACCGGCCTCACCTCCTCGCTCACCCGGATCATCGGCTCGCCGCTCTTGCCGATGATGCGG > 2:1274320/1‑95 TGCTGACCGGCAAGCTGGTCAGCACCCATAACGAAACCGGCCTCACCTCCTCGCTCACCCGGATCATCGGCTCGCCGCTCTTGCCGATGATGCGG < 1:1274320/95‑1 CATCGGCTCGCCGCTCTTGCCGATGATGCGGGTGAGCGGCTAGGTGAGGCCGGTTTCGTTATGGGTGCTGACCAGCTTGCCGGTCAGCAGCAGCCCCCAGGTGGCGGCGTTGACGAACAGTGACGGGCTGTTGCCCAGGTGCGGCTGCCA < 1:1696851/150‑1 CATCGGCTCGCCGCTCTTGCCGATGATGCGGGTGAGCGAGGAGGTGAGGCCGGTTTCGTTATGGGTGCTGACCAGCTTGCCGGTCAGCAGCAGCCCCCAGGTGGCGGCGTTGACGAACAGTGACGGGCTGTTGCCCAGGTGCGGCTGCCA < 1:1775414/150‑1 TCGGCTCGCCGCTCTTGCCGATGATGCGGGTGAGCGAGGAGGTGAGGCCGGTTTCGTTATGGGTGCTGACCAGCTTGCCGGTCAGCAGCA < 1:2823658/90‑1 TCGGCTCGCCGCTCTTGCCGATGATGCGGGTGAGCGAGGAGGTGAGGCCGGTTTCGTTATGGGTGCTGACCAGCTTGCCGGTCAGCAGCA > 2:2823658/1‑90 GCTCGCCGCTCTTGCCGATGATGCGGGTGAGCGAGGAGGTGAGGCCGGTTTCGTTATGGGTGCTGACCAGCTTGCCG < 1:584292/77‑1 GCTCGCCGCTCTTGCCGATGATGCGGGTGAGCGAGGAGGTGAGGCCGGTTTCGTTATGGGTGCTGACCAGCTTGCCG > 2:584292/1‑77 TCCGCGACAAGATCAGTACCGGCAACTGGCAGCCGCACCTGGGCAACAGCCCGTCACTGTTCGTCAACGCCGCCACCTGGGGGCTGCTGCTGACCGGCAAGCTGGTCAGCACCCATAACGAAACCGGCCTCACCTCCTCGCTCACCCGCATCATCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5631069‑5631226‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcatcggcTCGCCGCTCTTGCCGATGATGCGGGTGAGCGAGGAGGTGAGGCCGGTTTCGTTATGGGTGCTGACCAGCTTGCCGGTCAGCAGCAGCCCCCAGGTGGCGGCGTTGACGAACAGTGACGGGCTGTTGCCCAGGTGCGGCTGCCA < NC_002947/5631237‑5631095 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |