Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
JC | NC_002947 | 5,911,030 | Δ6 bp | 16.9% | coding (1179‑1184/1359 nt) | spuB ← | glutamylpolyamine synthetase |
New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5911029 | 92 (0.800) | 18 (0.160) | 17/234 | NT | 16.9% | coding (1185/1359 nt) | spuB | glutamylpolyamine synthetase |
? | NC_002947 | 5911036 = | 89 (0.810) | coding (1178/1359 nt) | spuB | glutamylpolyamine synthetase |
CACGCTCCCACGAACTGATGACGCGCTTGAAGTTTTCATGCTCGGCGCGCTTGGTAGCGACATACCCGGTGATGAATTTCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5910878‑5911029 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGACGCGCCGGCTTTG > NC_002947/5911036‑5911184 CACGCTCCCACGAACTGATGACGCGCTTGAAGTTTTCATGCTCGGCGCGCTTGGTAGCGACATACCCGGTGATGAATTTCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCA > 2:2618510/1‑150 ACGTTCCCACGAACGGATGACGCGCTTGAAGTTTTCATAATCGCCGCTCTTGGTAGAGACATACCCGGTGATGAATTTCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAG > 2:1642974/1‑150 ACGCTCCCACGAACTGATGACGCGCTTGAAGTTTTCATGCTCGGCGCGCTTGGTAGCGACATACCCGGTGATGAATTTCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAG < 2:2624244/150‑1 GCGCTTGAAGTTTTCATGCTCGGCGCGCTTGGTAGCGACATACCCGGTGATGAATTTCTTGCCCAGGTGGTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGTTGCGGCGTTCGTAGCCACG > 1:2518361/1‑150 AGTTTTCATGCTCGGCGCGCTTGGTAGCGACATACCCGGTGATGAATTTCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCA > 2:1095795/1‑150 TTTTCATGCTCGGCGCGCTTGGTAGCGACATACCCGGTGATGAATTTCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGC < 1:2670724/117‑1 TTTTCATGCTCGGCGCGCTTGGTAGCGACATACCCGGTGATGAATTTCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGC > 2:2670724/1‑117 TTTCATGCTCGGCGCGCTTGGTAGCGACATACCCGGTGATGAATTTCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTG < 2:762316/150‑1 GCTCGGCGCGCTTGGTAGCGACATACCCGGTGATGAATTTCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGC > 1:2725655/1‑150 GGTGATGAATTTCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGAT < 2:1139133/150‑1 CAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGTTGCGGCGTTCGTAGCCACGGCCCTG > 1:1451949/1‑93 CAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGTTGCGGCGTTCGTAGCCACGGCCCTG < 2:1451949/93‑1 GTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGC > 1:1819183/1‑150 ACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATG < 2:2518361/150‑1 CGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAG < 1:1095795/150‑1 CTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGG > 1:1709957/1‑150 TGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGG > 2:943378/1‑150 TGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGTTGCGGCGTTCGTAGCCACGGCCATGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGG > 2:865290/1‑150 GCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGG < 1:2806336/128‑1 GCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGG > 2:2806336/1‑128 GTCCTCGATGGTCAGGGGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCG > 1:1372027/1‑150 CTCGATGGTCAGGGGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTT > 2:2685533/1‑150 GGTCAGGGGCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGCGTTCGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGAC < 1:1593623/150‑1 GCAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGACGCGCCGGC > 2:705200/1‑150 CAGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGACGCGCCGGCT < 1:979784/150‑1 AGGTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGACGCGCCGGCTT < 1:1583489/150‑1 GTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGCTACCTTCGACCATGCCGATGTAACCAGGCAGTAGGCTGGCGGCGATGGCCAGGTACGGGTGTGCGGCGGCGCCCGGCGGGCGGTTCTAGACGCGCCGGCTTTG > 1:691166/1‑150 CACGCTCCCACGAACTGATGACGCGCTTGAAGTTTTCATGCTCGGCGCGCTTGGTAGCGACATACCCGGTGATGAATTTCTTGCCCAGGTACTGCACCAGCGCACGGCTGTTTTCCATGCGTTCCAAGGCGTCCTCGATGGTCAGGGGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5910878‑5911029 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggTTGCGGCGTTCGTAGCCACGGCCCTGCACTGGCGCGCTGGCCTCGATACCTTCGACCATGCCGATGTAGCCACACAGTAGGCTGGCGGCGATGGCCAGGTACGGGTTGGCGTCGGCGCCCGGCAGGCGGTTCTCGACGCGCCGGCTTTG > NC_002947/5911036‑5911184 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |