| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6027949 = | 49 (0.430) | 11 (0.120) | 9/202 | NT | 29.9% | intergenic (‑37/+74) | PP_5277/kauB | MFS transporter/4‑guanidinobutyraldehyde dehydrogenase |
| ? | NC_002947 | 6028006 = | 11 (0.120) | intergenic (‑94/+17) | PP_5277/kauB | MFS transporter/4‑guanidinobutyraldehyde dehydrogenase | |||||
TCGGTGGCTTCAAACAGTCGGGCAACGGCCGTGACAAGTCGCTGCACGCACTGGAGAAGTACACCGAGCTGAAGGCGACCTGGATCAAGCTGTAACCCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6028117‑6027949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaggagcgggcttgcccgcGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCACCATCGTACTGGTTGA > NC_002947/6028006‑6028153 TCGGTGGCTTCAAACAGTCGGGCAACGGCCGTGACAAGTCGCTGCACGCACTGGAGAAGTACACCGAGCTGAAGGCGACCTGGATCAAGCTGTAACCCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTG < 1:156491/150‑1 GTGGCTTCAAACAGTCGGGCAACGGCCGTGACAAGTCGCTGCACGCACTGGAGAAGTACACCGAGCTGAAGGCGACCTGGATCAAGCTGTAACCCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAG < 2:239733/150‑1 TTCAAACAGTCGGGCAACGGCCGTGACAAGTCGCTGCACGCACTGGAGAAGTACACCGAGCTGAAGGCGACCTGGATCAAGCTGTAACCCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCG > 1:363249/1‑150 TCAAACAGTCGGGCAACGGCCGTGACAAGTCGCTGCACGCACTGGAGAAGTACACCGAGCTGAAGGCGACCTGGATCAAGCTGTAACCCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGG > 2:638662/1‑150 CAAACAGTCGGGCAACGGCCGTGACAAGTCGCTGCACGCACTGGAGAAGTACACCGAGCTGAAGGCGACCTGGATCAAGCTGTAACCCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGG < 2:876559/150‑1 ACAGTCGGGCAACGGCCGTGACAAGTCGCTGCACGCACTGGAGAAGTACACCGAGCTGAAGGCGACCTGGATCAAGCTGTAACCCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTT < 2:363249/150‑1 CGGCCGTGACAAGTCGCTGCACGCACTGGAGAAGTACACCGAGCTGAAGGCGACCTGGATCAAGCTGTAACCCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTT < 1:1214981/138‑1 CGGCCGTGACAAGTCGCTGCACGCACTGGAGAAGTACACCGAGCTGAAGGCGACCTGGATCAAGCTGTAACCCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTT > 2:1214981/1‑138 CTGGATCAAGCTGTAACCCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTT > 1:2231236/1‑70 CTGGATCAAGCTGTAACCCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTT < 2:2231236/70‑1 CCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGG > 1:65221/1‑64 CCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGG < 2:65221/64‑1 CCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGA > 2:2898280/1‑143 CCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGA < 1:2898280/143‑1 CTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGT < 1:2794042/91‑1 CTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGT > 2:2794042/1‑91 CTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCG < 2:1733244/89‑1 CTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCG > 1:1733244/1‑89 GCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCG > 1:1889590/1‑150 GCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGAC < 2:74946/114‑1 GCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGAC > 1:74946/1‑114 CGCGACCGTTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCG > 2:93250/1‑150 GACCGTTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTC < 1:93250/150‑1 TGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCAGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCG > 1:3050323/1‑150 AGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCA > 1:1734239/1‑150 GGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTAGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCAC > 2:2219726/1‑150 GGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCGGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCACCATCG > 2:2435671/1‑150 GGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCACCATCGT > 2:60041/1‑150 GCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCACCATCGTA > 2:682443/1‑150 GCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCACCATCGTA > 1:851438/1‑150 GCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCACCATCGTA > 2:396715/1‑150 CTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCACCATCGTAC < 1:876559/150‑1 TGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGCACGGCGCGGTCATGTCGCCACCATCGTACTG < 2:1889590/150‑1 CCGCGACAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCACCATCGTACTGGTT > 1:1049600/1‑150 CGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCACCATCGTACTGGTTG > 1:2247745/1‑150 CGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCACCATCGTACTGGTTG > 2:2120484/1‑150 GCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCACCATCGTACTGGTTGA < 1:2219726/150‑1 GCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCACCATCGTACTGGTTGA > 2:294719/1‑150 GCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCATACAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCACCATCGTACTGGTTGA > 2:217854/1‑150 TCGGTGGCTTCAAACAGTCGGGCAACGGCCGTGACAAGTCGCTGCACGCACTGGAGAAGTACACCGAGCTGAAGGCGACCTGGATCAAGCTGTAACCCGGTAGGTCCTTTTCGCGGGCAAGCCCGCTCCTGCAGGTCTTCGCGACCGTTGCAGGAGCGGGCTTGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6028117‑6027949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaggagcgggcttgcccgcGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCATGTCGCCACCATCGTACTGGTTGA > NC_002947/6028006‑6028153 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |