New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1149934 =97 (0.850)7 (0.070) 6/220 NT 8.0% intergenic (‑175/+82) PP_1008/gapA RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase
?NC_002947 1149995 = 73 (0.710)intergenic (‑236/+21) PP_1008/gapA RNA polymerase subunit sigma‑24/glyceraldehyde‑3‑phosphate dehydrogenase

Only 100 of 117 total aligned reads displayed.

ATGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCA  >  NC_002947/1149786‑1150082
                                                                                                                                                    |                                                                                                                                                     
gatcttcgatgccaaccatacccgggccaacgggcggatgctcaaggtgctggcctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctggctgacgcgacccgtgtgggagcggcCt                                                                                                                                                      <  2:438520‑M1/2‑1 (MQ=255)
 atcttcgatgccaaccatacccgggccaacgggcggatgctcaaggtgctggcctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctggctgacgcgacccgtgtgggagcggcCtt                                                                                                                                                     >  1:1999411‑M1/148‑150 (MQ=255)
   aTAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGc                                                                                                                                                   >  2:1890532/1‑150 (MQ=255)
     aaTGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGccc                                                                                                                                                 >  2:795953/1‑150 (MQ=255)
       tGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCcgc                                                                                                                                               >  2:2499475/1‑150 (MQ=255)
       gatgccaaccatacccgggccaacgggcggatgctcaaggtgctggcctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctggctgacgcgacccgtgtgggagcggcCTTGCCcgc                                                                                                                                               >  2:2741343‑M1/142‑150 (MQ=255)
       gatgccaaccatacccgggccaacgggcggatgctcaaggtgctggcctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctggctgacgcgacccgtgtgggagcggcCTTGCCcgc                                                                                                                                               <  1:529641‑M1/9‑1 (MQ=255)
        atgccaaccatacccgggccaacgggcggatgctcaaggtgctggcctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctggctgacgcgacccgtgtgggagcggcCTTGCCcgcg                                                                                                                                              <  2:1563652‑M1/10‑1 (MQ=255)
           tATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCcgtcaaa                                                                                                                                           >  2:699936/1‑145 (MQ=255)
                    tgaggaaGGTCAAGTGTGGAATTATCAGGTAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGAAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGAGCTTGCCCGCGAACACGGGCGaa                                                                                                                                  <  2:1397402/144‑1 (MQ=37)
                    tGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGaa                                                                                                                                  <  1:2499475/150‑1 (MQ=255)
                    tGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGaa                                                                                                                                  >  2:1193492/1‑150 (MQ=255)
                    tGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGaa                                                                                                                                  <  1:1323080/150‑1 (MQ=255)
                       ggCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGAGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGc‑c                                                                                                                              >  1:981836/1‑150 (MQ=255)
                          aGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGt                                                                                                                           <  1:2732519/150‑1 (MQ=255)
                            aaggggcggatgctcaaggtgctggcctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctggctgacgcgacccgtgtgggagcgggCTTGCCCGCGAACACGGGCGAAGC‑CCGTGc                                                                                                                         <  1:3066559‑M1/30‑1 (MQ=255)
                               aaGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCAt                                                                                                                      <  1:1890532/150‑1 (MQ=255)
                               aaGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCAt                                                                                                                      >  2:232200/1‑150 (MQ=255)
                                  tgtgGAATTATCAGGAAAAGGTAAAGATTGTCGTCGCTGGGTGGGGTTTCCATTGGTTGGAAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGACCACGGGCGAAGC‑CCGTGCCATcca                                                                                                                   <  2:2968021/150‑1 (MQ=18)
                                     ggAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATccacca                                                                                                                >  2:1171624/1‑150 (MQ=255)
                                     ggAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATccacca                                                                                                                >  2:1435680/1‑150 (MQ=255)
                                      tgctcaaggtgctggcctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctggctgacgcgacccgtgtgggagcggcCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCcaccac                                                                                                               >  1:2789905‑M1/111‑150 (MQ=255)
                                         ttATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGgt                                                                                                            >  1:2861443/1‑150 (MQ=255)
                                           aTCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGgtgt                                                                                                          <  1:1435680/150‑1 (MQ=255)
                                           aTCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGgtgt                                                                                                          >  1:1307173/1‑150 (MQ=255)
                                            tcgggAATAGGTATGGATTGTAGTCACTGGGTGCTGTTTGGTTTTTTTGGGCGCAACTGCTTTGCTCAATTGGGAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGTCCGTGAACACGGGTGAAGG‑CGGTTTAATCCACCGCGgtgtg                                                                                                         <  2:155993/147‑2 (MQ=12)
                                            tCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGtt                                                                                                         >  2:1005010/1‑150 (MQ=255)
                                            tCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGtt                                                                                                         <  1:1005010/150‑1 (MQ=255)
                                            tCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGtt                                                                                                         >  2:1457030/1‑150 (MQ=255)
                                            tCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGtt                                                                                                         >  1:1610380/1‑150 (MQ=255)
                                             cAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTCCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTg                                                                                                        <  1:27262/150‑1 (MQ=255)
                                               ggAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGc                                                                                                      >  2:1063917/1‑150 (MQ=255)
                                               ggAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGc                                                                                                      >  2:466679/1‑150 (MQ=255)
                                                    gcctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctggctgacgcgacccgtgtgggagcgggCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTcgc                                                                                                 >  2:3066559‑M1/97‑150 (MQ=255)
                                                      gTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                                               >  1:2202123/1‑150 (MQ=255)
                                                      ctggtatgacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctggctgacgcgacccgtgtgggagcggcCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                                               >  1:1563652‑M1/95‑150 (MQ=255)
                                                       tAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCggg                                                                                              >  2:2285869/1‑150 (MQ=255)
                                                       tAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCggg                                                                                              <  2:364320/150‑1 (MQ=255)
                                                        aaaGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGc                                                                                             >  1:1118140/1‑150 (MQ=255)
                                                          aGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCaa                                                                                           <  1:1322970/150‑1 (MQ=255)
                                                          aGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCaa                                                                                           <  1:2285869/150‑1 (MQ=255)
                                                            aTTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAgg                                                                                         <  2:2839951/150‑1 (MQ=255)
                                                             ttGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGc                                                                                        <  1:1405244/150‑1 (MQ=255)
                                                             gacaacgagtgggggttcagcaaccggatgctggacaactgcctggcgctgcaccgggctggctgacgcgacccgtgtgggagcggcCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGc                                                                                        >  1:2419183‑M1/88‑150 (MQ=255)
                                                                  gTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTc                                                                                   >  1:893884/1‑150 (MQ=255)
                                                                   tCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATc                                                                                                                     <  1:2342393/115‑1 (MQ=255)
                                                                     aCTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCca                                                                                <  1:1589519/150‑1 (MQ=255)
                                                                      cTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCcac                                                                               <  1:738995/150‑1 (MQ=255)
                                                                         gATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACg                                                                            <  2:1307962/150‑1 (MQ=255)
                                                                           tGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACggg                                                                          <  2:1118140/150‑1 (MQ=255)
                                                                               gTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcgc                                                                      <  1:232200/150‑1 (MQ=255)
                                                                               gTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcgc                                                                      <  1:1193492/150‑1 (MQ=255)
                                                                                 ttGCTTTTTTTGGTAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGt                                                                    >  2:2683932/1‑150 (MQ=255)
                                                                                 ttGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGt                                                                    <  2:2978830/150‑1 (MQ=255)
                                                                                     tttttttGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACggg                                                                                                                                      >  2:2595163/1‑81 (MQ=255)
                                                                                     tttttttGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACggg                                                                                                                                      <  1:2595163/81‑1 (MQ=255)
                                                                                       gatgctggacaactgcctggcgctgcaccgggctggctgacgcgacccgtgtgggagcggcCtt                                                                                                                                                     >  2:58354‑M1/62‑64 (MQ=255)
                                                                                       gatgctggacaactgcctggcgctgcaccgggctggctgacgagacccgtgtgggagcggcCtt                                                                                                                                                     <  1:58354‑M1/3‑1 (MQ=255)
                                                                                             ggAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACggg                                                                                                                                      >  2:2540978/1‑73 (MQ=40)
                                                                                             ggAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACggg                                                                                                                                      <  1:2540978/73‑1 (MQ=40)
                                                                                              gAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGt                                                       <  1:1171624/150‑1 (MQ=255)
                                                                                                 cAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGtt                                                                                                         >  1:2021830/1‑97 (MQ=255)
                                                                                                 cAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGtt                                                                                                         <  2:2021830/97‑1 (MQ=255)
                                                                                                  aaCTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAg                                                   >  2:2625457/1‑150 (MQ=255)
                                                                                                   aCTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGGGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAgc                                                  >  1:2669628/1‑150 (MQ=255)
                                                                                                    tgcctggcgctgcaccgggctggctgacgcgacccgtgtgggagcggcCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                                               >  2:1546555‑M1/49‑104 (MQ=255)
                                                                                                    tgcctggcgctgcaccgggctggctgacgcgacccgtgtgggagcggcCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCgg                                                                                               <  1:1546555‑M1/56‑1 (MQ=255)
                                                                                                    cTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCa                                                                                                                       >  1:2306835/1‑80 (MQ=35)
                                                                                                    cTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCa                                                                                                                       <  2:2306835/80‑1 (MQ=35)
                                                                                                     tGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAgcgc                                                >  1:2220167/1‑150 (MQ=255)
                                                                                                         ttGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCCGCGCCAgg                                            >  2:1148015/1‑150 (MQ=255)
                                                                                                         ttGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAgg                                            <  1:2591950/150‑1 (MQ=255)
                                                                                                             tCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcgc                                                                      <  2:477122/120‑1 (MQ=255)
                                                                                                             tCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTcgc                                                                      >  1:477122/1‑120 (MQ=255)
                                                                                                             tCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGt                                        >  2:2670856/1‑150 (MQ=255)
                                                                                                             tCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTCCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACCGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCGGCGCCAGGCAGt                                        >  1:2007339/1‑150 (MQ=255)
                                                                                                              cAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGtt                                       <  1:1486161/150‑1 (MQ=255)
                                                                                                               aaTTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCATACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTg                                      >  2:1671828/1‑150 (MQ=255)
                                                                                                               aaTTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTg                                      >  2:935824/1‑150 (MQ=255)
                                                                                                                aTTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGt                                     <  2:2861443/150‑1 (MQ=255)
                                                                                                                 tttCTAACAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACCCGGGCGCCGCTGCCTGTCAT‑GACCTCGGTGTTGGCTTCGCTGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTc                                    <  1:699936/150‑1 (MQ=25)
                                                                                                                 tttCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACgg                                                                           >  2:1685969/1‑111 (MQ=255)
                                                                                                                 tttCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTc                                    <  2:1610380/150‑1 (MQ=255)
                                                                                                                  ttCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTcc                                   <  2:2220167/150‑1 (MQ=255)
                                                                                                                   tCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCa                                  <  1:1063917/150‑1 (MQ=255)
                                                                                                                      aaaaGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGtt                                                                                                         >  1:1389430/1‑76 (MQ=255)
                                                                                                                      aaaaGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCa                               <  1:503357/150‑1 (MQ=255)
                                                                                                                       aaaGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCAt                              >  1:1796002/1‑150 (MQ=255)
                                                                                                                              gcgcGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCaa                                                                                           <  1:64591/82‑1 (MQ=255)
                                                                                                                              gcgcGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCaa                                                                                           >  2:64591/1‑82 (MQ=255)
                                                                                                                               cgcgATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGc                      <  1:466679/150‑1 (MQ=255)
                                                                                                                                gcgATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATc                             <  2:14781/142‑1 (MQ=255)
                                                                                                                                gcgATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCt                     >  1:2713296/1‑150 (MQ=255)
                                                                                                                                      ccTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAAccc               >  2:2830603/1‑150 (MQ=255)
                                                                                                                                       cctggggAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGc                      >  1:1940913/4‑142 (MQ=255)
                                                                                                                                       cTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAAcccc              <  1:167766/150‑1 (MQ=255)
                                                                                                                                               gCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACCCGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGtt      <  1:1457030/150‑1 (MQ=255)
                                                                                                                                               gCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGtt      >  2:2834895/1‑150 (MQ=255)
                                                                                                                                               gCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGtt      >  2:2140186/1‑150 (MQ=255)
                                                                                                                                                   gCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCa  <  2:1796002/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
ATGATAATGCTTATCATCCGTGCGGCAGGTCAAGTGTGGAATTATCAGGAAAAGGTAAAGATTGTAGTCACTGGATGCCGTTTGCTTTTTTTGGGAGCAACTGTCTTGCTCAATTTCTAAAAGCTGGCGCGATCCCTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGC‑CCGTGCCATCCACCACGGTGTTGGCTTCGCGGGCAAGGCCGCTCCCACACGGGTCGCGTCAGCCAGCCCGGTGCAGCGCCAGGCAGTTGTCCAGCATCCGGTTGCTGAACCCCCACTCGTTGTCA  >  NC_002947/1149786‑1150082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.