New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 149946536 (0.310)11 (0.120) 9/198 NT 21.7% intergenic (+35/‑131) trpS/zapE tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
?NC_002947 = 1499502 50 (0.540)intergenic (+72/‑94) trpS/zapE tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein

GCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCT  >  NC_002947/1499318‑1499614
                                                                                                                                                   |                                                                                                                                                     
gCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGGCTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAAc                                                                                                                                                     >  2:2097087/1‑150 (MQ=255)
gCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAATGGTGGGAGCGGGCGTGCCCGCGAAAc                                                                                                                                                     <  1:2147111/150‑1 (MQ=255)
 ccTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACa                                                                                                                                                    <  1:240474/150‑1 (MQ=255)
    gtgGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCACCCCAAACAGgc                                                                                                                                                 <  2:1529708/150‑1 (MQ=255)
            aTGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGAGGCGATTCAGAGCCTGAACGAAGTCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACCGGGGCcgcgct                                                                                                                                         <  2:288543/150‑3 (MQ=255)
              ggCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGc                                                                                                                                       <  2:2015430/150‑1 (MQ=255)
                 gAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATg                                                                                                                                    <  2:2961329/150‑1 (MQ=255)
                 gAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATg                                                                                                                                    <  2:1446559/150‑1 (MQ=255)
                   gCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGCTGGAGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGc                                                                                                                                  >  1:938700/1‑150 (MQ=255)
                        ttGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCgg                                                                                                                             <  1:1576890/150‑1 (MQ=255)
                        tcgctgACGGGCCGCAGTTCGACCAAGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAGACAGGCGCCGCGGTGCATGGCACCgg                                                                                                                             <  2:938700/145‑1 (MQ=255)
                         tGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGc                                                                                                                            <  2:826058/150‑1 (MQ=255)
                         tGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGc                                                                                                                            <  1:2097087/150‑1 (MQ=255)
                            cGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGACCTAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCttt                                                                                                                         <  1:32491/150‑1 (MQ=255)
                                  gCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGgt                                                                                                                   <  1:2883217/150‑1 (MQ=255)
                                   ccGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAcaccggcaaagccggtgccatgcaccgcggcgcctgt                                                                                                                  >  2:1284346‑M1/1‑113 (MQ=255)
                                         ttcgggaaCGCTGAGGCCCGTAATGCGGCCATTCAGAGCTTGCACGACGCCTTGGCACCACAGCAGGGCTGAGGCTGCCAAACGGTGGGAGCGGTCTGGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTcccg                                                                                                            <  2:935527/144‑1 (MQ=37)
                                         ttCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGACGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcg                                                                                                            >  1:642277‑M2/1‑144 (MQ=255)
                                         ttCGACAACGCTGAAGCCCGTGATGCGGCCATGCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcg                                                                                                            >  1:1409722‑M2/1‑144 (MQ=255)
                                          tctacaaCGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgcgg                                                                                                           <  1:1284346‑M1/147‑45 (MQ=255)
                                          tCGACAACGCTGAATCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGCCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgcgg                                                                                                           <  1:2734946‑M1/150‑45 (MQ=255)
                                          tCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcgg                                                                                                           >  1:2242438‑M2/1‑143 (MQ=255)
                                               aaCGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGAATTGGTACCACAGCAGGACTGAGGCTTCCAAACGGTGGGAGCGGGCGTGCCCGCGAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgcgggcacg                                                                                                      >  1:2834045‑M1/1‑101 (MQ=255)
                                                aCGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcgggcacgc                                                                                                     >  2:2469276‑M2/1‑137 (MQ=255)
                                                          ccGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgcgggcacgcccgctcccac                                                                                           <  2:2834045‑M1/150‑61 (MQ=255)
                                                                tGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcgggcac                                                                                                       >  2:961475‑M2/1‑121 (MQ=255)
                                                                tGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcgggcac                                                                                                       <  1:961475‑M2/132‑12 (MQ=255)
                                                                       aTTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCg                                                                                                                     <  1:231780/111‑1 (MQ=255)
                                                                       aTTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCg                                                                                                                     >  2:231780/1‑111 (MQ=255)
                                                                           agagCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCtt                                                                                                                          >  1:2230081/1‑102 (MQ=255)
                                                                           agagCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCtt                                                                                                                          <  2:2230081/102‑1 (MQ=255)
                                                                                 tGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgtgg                                                                                                           >  2:2096492‑M1/1‑67 (MQ=255)
                                                                                 tGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgcgg                                                                                                           <  1:2096492‑M1/111‑45 (MQ=255)
                                                                                           cTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGGGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcgg                                                                                                           <  2:415049‑M2/101‑8 (MQ=255)
                                                                                           cTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGgt                                                                                                                   >  1:1755865/1‑93 (MQ=255)
                                                                                           cTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGgt                                                                                                                   <  2:1755865/93‑1 (MQ=255)
                                                                                           cTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcgg                                                                                                           >  1:415049‑M2/1‑94 (MQ=255)
                                                                                            ttGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACa                                                         >  1:1271958/1‑150 (MQ=255)
                                                                                                   cacaGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcgg                                                                                                           <  1:2099931‑M2/93‑8 (MQ=255)
                                                                                                   cacaGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcgg                                                                                                           >  2:2099931‑M2/1‑86 (MQ=255)
                                                                                                        cagGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcgggcac                                                                                                       <  2:1728214‑M2/92‑12 (MQ=255)
                                                                                                        cagGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcgggcac                                                                                                       >  1:1728214‑M2/1‑81 (MQ=255)
                                                                                                           gACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAacaggcgcgccggtgccatgcaccgcggcgcctgt                                                                                                                    <  2:2820166‑M1/76‑36 (MQ=255)
                                                                                                           gACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAacaggcgcgccggtgccatgcaccgcggcgcctgt                                                                                                                    >  1:2820166‑M1/1‑41 (MQ=255)
                                                                                                                  gCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgcg                                                                                                            >  2:2246522‑M1/1‑34 (MQ=255)
                                                                                                                  gCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgcg                                                                                                            <  1:2246522‑M1/77‑44 (MQ=255)
                                                                                                                        aaaCGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGa                                                                                        <  1:1507041/91‑1 (MQ=255)
                                                                                                                        aaaCGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGa                                                                                        >  2:1507041/1‑91 (MQ=255)
                                                                                                                             gTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcgggcacgcccgctcccaccgtttggcagcctcagtcctgctgtggtgccaaggcttcgttcaggctctgaatggccgcatcacgg                        <  2:2834045‑M2/150‑91 (MQ=255)
                                                                                                                                     gggCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTGGCGGGCACGCACGCGCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGGCGGCCCGCTTTTTGTTGCCTCTCTAACGAATCATGAc                >  2:1796852/1‑150 (MQ=37)
                                                                                                                                      ggCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACCGTGACGGCCCGGTTCGTGTTGCCTCGCTAACGAATCATGACt               >  2:189425/1‑150 (MQ=255)
                                                                                                                                       gCGTGCCCGCGAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgcgggcacgcccgctcccaccgtttggcagcctcagtcctgctgtggtgccaaggcttcgttcaggctctgaatggccgcatcacgggcttcagcgt              >  2:2469276‑M1/1‑13 (MQ=255)
                                                                                                                                       gCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTc              >  2:1789141/1‑150 (MQ=255)
                                                                                                                                        cGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcgggcacgcccgctcccaccgtttggaagcctcagtcctgctgtggtaccaattcttcgttcaggctctgaatggccgcatcacgggcttcagcgtt             >  1:2834045‑M2/1‑49 (MQ=255)
                                                                                                                                         gTGCCCGCGAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgcgggcacgcccgctcccaccgtttggcagcctcagtcctgctgtggtgccaaggcttcgttcaggctctgaatggccgca                              >  2:961475‑M1/1‑11 (MQ=255)
                                                                                                                                         gTGCCCGCGAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgcgggcacgcccgctcccaccgtttggcagcctcagtcctgctgtggtgccaaggcttcgttcaggctctgaatggccgca                              <  1:961475‑M1/132‑122 (MQ=255)
                                                                                                                                         gTGCCCGCGAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgcgggcacgcccgctcccaccgtttggcagcctcagtcctg                                                                      <  2:1728214‑M1/92‑82 (MQ=255)
                                                                                                                                         gTGCCCGCGAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgcgggcacgcccgctcccaccgtttggcagcctcagtcctg                                                                      >  1:1728214‑M1/1‑11 (MQ=255)
                                                                                                                                          tGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTc              <  1:2395933/147‑1 (MQ=255)
                                                                                                                                          tGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTc              >  2:2395933/1‑147 (MQ=255)
                                                                                                                                          tGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCt           >  1:2693301/1‑150 (MQ=255)
                                                                                                                                            cccGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTa         >  1:2012094/1‑150 (MQ=255)
                                                                                                                                             ccGCGAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgcgggcacgcccgctcccaccgtttggcagcctcagtcctgctgtggtgccaaggcttcgttcaggctctgaatggccgcatcacgggcttcagcgttgtcga        >  1:2242438‑M1/1‑7 (MQ=255)
                                                                                                                                             ccGCGAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgcgggcacgcccgctcccaccgtttggcagcctcagtcctgctgtggtgccaag                                                         >  1:415049‑M1/1‑7 (MQ=255)
                                                                                                                                             ccGCGAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgcgggcacgcccgctcccaccgtttggcagcctcagtcctgctgtg                                                                 >  2:2099931‑M1/1‑7 (MQ=255)
                                                                                                                                             ccGCGAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgcgggcacgcccgctcccaccgtttggcagcctcagtcctgctgtg                                                                 <  1:2099931‑M1/93‑87 (MQ=255)
                                                                                                                                             ccGCGAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgcgggcacgcccgcccccaccgtttggcagcctcagtcctgctgtggtgccaag                                                         <  2:415049‑M1/101‑95 (MQ=255)
                                                                                                                                             ccGCGAAACAGTCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATg                  <  2:39587/140‑1 (MQ=255)
                                                                                                                                             ccGCGAAACAGTCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATg                  >  1:39587/1‑140 (MQ=255)
                                                                                                                                             ccGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcgggcacgcccgctcccaccgtttggcagcctcagtcctgctgtggtggcaaggcttcgttcaggctctgaatggccgcatcacgggattcagcgttgtcga        <  1:2734946‑M2/150‑107 (MQ=255)
                                                                                                                                             ccGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcgggcacgcccgctcccaccgtttggcagcctcagtcctgctgtggtgccaaggcttcgttcaggctctgaatggccgcatcacgggcttcagcgttgtaga        <  1:1284346‑M2/150‑107 (MQ=255)
                                                                                                                                             ccGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcgggcacgcccgctcccaccgtttggcagcctcagtcctgctgtggtgccaaggcttcgttca                                               <  1:2096492‑M2/111‑68 (MQ=255)
                                                                                                                                             ccGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGGCATAAGGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGATGGCTTCGGAAAGAAACGTGACTCCCTCAg        >  1:532360/1‑150 (MQ=25)
                                                                                                                                             ccGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAg        >  2:2814482/1‑150 (MQ=255)
                                                                                                                                             ccGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAg        >  1:129846/1‑150 (MQ=255)
                                                                                                                                             ccACGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcgggcacgcccgctcccaccgtttggcagcctcagtcctgctgtggtgccaaggcttcgttca                                               >  2:2096492‑M2/1‑44 (MQ=255)
                                                                                                                                              cgcgAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgcgggcacgcccgctcccaccgtttggcagcgtcagtcctgctgtggtgccaaggcttcgttcaggctctgaatggccgcatcacgggcttcagcgttgtcgaa       >  1:642277‑M1/1‑6 (MQ=255)
                                                                                                                                              cgcgAAcaccggcaaagccggtgccatgcaccgcggcgcctgtttcgcgggcacgcccgctcccaccgtttggcagcctcagtcctgctgtggtgccaaggcttcgttcaggctctgcatggccgcatcacgggcttcagcgttgtcgaa       >  1:1409722‑M1/1‑6 (MQ=255)
                                                                                                                                              cgcgAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcgggcacgcccgctcccaccgtttggcagc                                                                                <  1:2246522‑M2/77‑35 (MQ=255)
                                                                                                                                              cgcgAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGttcgcgggcacgcccgctcccaccgtttggcagc                                                                                >  2:2246522‑M2/1‑43 (MQ=255)
                                                                                                                                              cgcgAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGc                                                 >  2:1778352/1‑108 (MQ=255)
                                                                                                                                              cgcgAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGc                                                 <  1:1778352/108‑1 (MQ=255)
                                                                                                                                               gcgAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATc                     <  2:448129/135‑1 (MQ=255)
                                                                                                                                               gcgAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATc                     >  1:448129/1‑135 (MQ=255)
                                                                                                                                                   aaCAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCt  <  1:2814482/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
GCCTGTGGCTCAATGGCGAGCAGGTTGCCGACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCT  >  NC_002947/1499318‑1499614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.