BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	199507 =	97 (0.850)	6 (0.050)	5/234	NT	6.1%	coding (5013/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	201464 =	92 (0.840)	6 (0.050)	5/234	NT	6.1%	coding (6970/26049 nt)	PP_0168	putative surface adhesion protein

Only 100 of 113 total aligned reads displayed.

CATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACC  >  NC_002947/201322‑201610

cATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATAACGGAAGGAAAAAAAAGCGCGCCGTacac                                                                                                                                              >  2:1710063/1‑150 (MQ=14)

 aTCACGGCCGACCAGACCTCGGTAGCCTAGAACGTCAAACCGACCTTCACTGTGCACGTCCATCAGCCGCTGGCCCACGACCTGATCGTAACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACAcc                                                                                                                                             >  1:1524459/1‑150 (MQ=255)

            gtcggtgacttgaaccgaagcagcaccgcccagctcaaggttcgcgaatgcagcaccagtggcgtccaccgccgagttgatgcccaagctgatctggccagcgtcctgatagacgtcatcgccttgcgcgCCGTACACCCACGACGCGCa                                                                                                                                  >  1:3007160‑M2/131‑150 (MQ=255)

             tcggtgacttgaaccgcagcaccaccgcccagctcaaggttctcgaatgcagcaccagtggcgtccaccgccgagttgatgcccaagctgatctggccagcgtcctgatagacgtcatcgccttgcgcgCCGTACACCCACGACGCGCaa                                                                                                                                 <  2:3007160‑M2/21‑1 (MQ=255)

             cAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCaa                                                                                                                                 >  1:2016675/1‑150 (MQ=255)

              aGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAg                                                                                                                                <  1:238968/150‑1 (MQ=255)

               gACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAgg                                                                                                                               >  2:2457742/1‑150 (MQ=255)

                  cTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGa                                                                                                                            >  1:2262808/1‑150 (MQ=255)

                   tCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAACCCAGCGCGCCGTACACCCACGACGCGCAAGGCGAt                                                                                                                           <  2:2150837/150‑1 (MQ=255)

                   tCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGAt                                                                                                                           <  1:2586372/150‑1 (MQ=255)

                      gTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGAc                                                                                                                        <  2:1840102/150‑1 (MQ=255)

                        aGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCCTATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGt                                                                                                                      <  1:2041110/150‑1 (MQ=255)

                          ccGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCt                                                                                                                    >  2:2394495/1‑150 (MQ=255)

                                aCGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAgg                                                                                                              <  1:2597944/150‑1 (MQ=255)

                                 cGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGa                                                                                                             <  2:893184/150‑1 (MQ=255)

                                 cGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGa                                                                                                             <  2:2016675/150‑1 (MQ=255)

                                     aaaCCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCt                                                                                                         >  1:1385290/1‑150 (MQ=255)

                                       aCCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTgg                                                                                                       <  2:12566/150‑1 (MQ=255)

                                        ccGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGc                                                                                                      >  2:2987352/1‑150 (MQ=255)

                                         cGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGcc                                                                                                     >  2:699729/1‑150 (MQ=255)

                                           aCCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAg                                                                                                   <  1:1710063/150‑1 (MQ=255)

                                           aCCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAg                                                                                                   >  1:614671/1‑150 (MQ=255)

                                           aCCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAg                                                                                                   >  1:1960492/1‑150 (MQ=255)

                                             cTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGAt                                                                                                 >  1:1575621/1‑150 (MQ=255)

                                              ttCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACAGCCACGACGCGCAAGGCGATGACGTCGATCAGGACGCTGGCCAGAta                                                                                                >  1:799899/1‑149 (MQ=255)

                                               tCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCa                                                                                               >  2:2985917/1‑150 (MQ=255)

                                                   tgtgCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCtt                                                                                           >  1:570637/1‑150 (MQ=255)

                                                     tgCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTgg                                                                                         <  2:570637/150‑1 (MQ=255)

                                                      gCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTggg                                                                                        >  2:1763726/1‑150 (MQ=255)

                                                         cGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATc                                                                                                <  2:1665588/139‑1 (MQ=255)

                                                         cGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATc                                                                                                >  1:1665588/1‑139 (MQ=255)

                                                           tCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCa                                                                                   >  1:1580477/1‑150 (MQ=255)

                                                             gcagcaccagtggcgtccaccgccgagttgatgcccacgctgatctggccagcgtcctgatagacgtcatcgccttgcgcgCCGTACACCCACGACGCGCAAGGCGa                                                                                                                            <  1:3012054‑M2/26‑1 (MQ=255)

                                                             gcagcaccagtggcgtccaccgccgagttgatgcccaagctgatctggccagcgtcctgatagacgtcatcgccttgcgcgCCGTACACCCACGACGCGCAAgg                                                                                                                               >  2:1279882‑M2/82‑104 (MQ=255)

                                                             gcagcaccagtggcgtccaccgccgagttgatgcccaagctgatctggccagcgtcctgatagacgtcatcgccttgcgcgCCGTACACCCACGACGCGCAAgg                                                                                                                               <  1:1279882‑M2/23‑1 (MQ=255)

                                                             gcagcaccagtggcgtccaccgccgagttgatgcccaagctgatctggccagcgtcctgatagacgtcatcgccttgcgcgCCGTACACCCACGACGCGCAAGGCGa                                                                                                                            >  2:3012054‑M2/82‑107 (MQ=255)

                                                               tCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTGTATCAGGACGCTGGCCAGATCAGCTTGGCCGTCAACTc                                                                               >  1:1566100/1‑150 (MQ=255)

                                                               tCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTc                                                                               >  1:483594/1‑150 (MQ=255)

                                                               tCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTc                                                                               >  1:2345669/1‑150 (MQ=255)

                                                                     gCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGt                                                                        >  1:2956285/1‑150 (MQ=40)

                                                                      cTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGAGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTg                                                                       <  1:2128322/150‑1 (MQ=255)

                                                                         gCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGAc                                                                    <  2:2345669/150‑1 (MQ=40)

                                                                           ccACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGc                                                                  >  2:324530/1‑150 (MQ=255)

                                                                                aCCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTg                                                             <  2:2684828/150‑1 (MQ=255)

                                                                                  cTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGt                                                           >  1:463186/1‑150 (MQ=255)

                                                                                    gATCGTGACCTTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGtgc                                                         >  1:2095906/1‑150 (MQ=255)

                                                                                    gATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGtgc                                                         <  2:1580477/150‑1 (MQ=40)

                                                                                    gATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGtgc                                                         <  2:463186/150‑1 (MQ=40)

                                                                                    gATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGtgc                                                         >  2:1974952/1‑150 (MQ=40)

                                                                                       cGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGtgctgc                                                      <  2:159667/150‑1 (MQ=38)

                                                                                       cGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGtgctgc                                                      <  2:1385290/150‑1 (MQ=39)

                                                                                        gTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGAt                                                                                                                           <  2:1687237/81‑1 (MQ=40)

                                                                                        gTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGAt                                                                                                                           >  1:1687237/1‑81 (MQ=39)

                                                                                             ccTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCga                                                >  1:139023/1‑150 (MQ=255)

                                                                                             ccTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCga                                                <  2:1519275/150‑1 (MQ=255)

                                                                                             ccTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCga                                                <  2:1524459/150‑1 (MQ=39)

                                                                                                  gCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAAcc                                           >  2:2181185/1‑150 (MQ=255)

                                                                                                       aacGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCaa                                      >  2:1510137/1‑150 (MQ=255)

                                                                                                          gCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGATGCGCAAGGCGATGACGTCTATCAGGACGc                                                                                                          <  2:2539488/80‑1 (MQ=255)

                                                                                                          gCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGATGCGCAAGGCGATGACGTCTATCAGGACGc                                                                                                          >  1:2539488/1‑80 (MQ=255)

                                                                                                          gCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTg                                                                                          >  1:547572/1‑96 (MQ=40)

                                                                                                          gCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTg                                                                                          <  2:547572/96‑1 (MQ=255)

                                                                                                            tCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTggg                                 >  2:2000863/1‑150 (MQ=255)

                                                                                                            tCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTggg                                 <  1:2624929/150‑1 (MQ=255)

                                                                                                              aGGTCACCATCAAGGCCGGTGAAACCAGCGCGTCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTCGCCAGATCAGCTTAGGC‑TGATGAGGGCCACCCGACTCTACTTGTGCTGCGTTCGAGAACCTGCAACTGggcg                               <  1:2066253/150‑1 (MQ=9)

                                                                                                              aGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTc                                                  >  2:2205253/1‑131 (MQ=40)

                                                                                                              aGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTc                                                  <  1:2205253/131‑1 (MQ=38)

                                                                                                              aGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGggcg                               <  2:2024449/150‑1 (MQ=255)

                                                                                                                gTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGggcggc                             <  1:762966/150‑1 (MQ=255)

                                                                                                                gTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGggcggc                             >  2:762966/1‑150 (MQ=255)

                                                                                                                   aCCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGACCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAAc                          >  1:2358510/1‑150 (MQ=255)

                                                                                                                    ccATCAAGGCCGGTGAAACCAGCGAGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACg                         >  1:1011788/1‑150 (MQ=255)

                                                                                                                     cATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGc                        >  1:1218699/1‑150 (MQ=255)

                                                                                                                       tCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATc                                                                                                                 <  2:1733658/60‑1 (MQ=255)

                                                                                                                       tCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATc                                                                                                                 >  1:1733658/1‑60 (MQ=255)

                                                                                                                       tCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTg                                                                       <  2:1373267/101‑1 (MQ=38)

                                                                                                                       tCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTg                                                                       >  1:1373267/1‑101 (MQ=38)

                                                                                                                       tCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCtt                      >  1:266975/1‑150 (MQ=255)

                                                                                                                       tCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGAAACGCtt                      <  1:2457742/150‑1 (MQ=255)

                                                                                                                         aaGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCTTCg                    <  2:483594/150‑1 (MQ=255)

                                                                                                                              cGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCtt                      >  2:2020341/1‑143 (MQ=255)

                                                                                                                              cGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCtt                      <  1:2020341/143‑1 (MQ=255)

                                                                                                                              cGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCa               >  1:660691/1‑150 (MQ=255)

                                                                                                                               ggTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGAGGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGATGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCtt                      >  2:1995077/1‑142 (MQ=255)

                                                                                                                               ggTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGATGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCtt                      <  1:1995077/142‑1 (MQ=255)

                                                                                                                                gTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAg             >  1:2017960/1‑150 (MQ=255)

                                                                                                                                    aaCCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGAc         >  1:2967459/1‑150 (MQ=255)

                                                                                                                                     aCCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTAACAGAACCCAAACGTGATCAGCTTGACCACCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGAcc        >  1:2678455/1‑150 (MQ=17)

                                                                                                                                      ccAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCg       >  1:877259/1‑150 (MQ=255)

                                                                                                                                       cAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGtt                                                   <  2:2341388/105‑1 (MQ=32)

                                                                                                                                       cAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGtt                                                   >  1:2341388/1‑105 (MQ=32)

                                                                                                                                       cAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGa      >  1:2897623/1‑150 (MQ=255)

                                                                                                                                        aGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGac     >  2:3069580/1‑150 (MQ=255)

                                                                                                                                           gcgCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGc                                        <  1:1408235‑M2/109‑1 (MQ=255)

                                                                                                                                           gcgCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGc                                        >  2:1408235‑M2/4‑112 (MQ=255)

                                                                                                                                           gcgCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACAcc  >  1:1338013‑M2/4‑150 (MQ=255)

                                                                                                                                           gcgCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACAcc  <  1:2987352‑M2/147‑1 (MQ=255)

                                                                                                                                           gcgCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACAcc  <  2:1788531‑M2/147‑1 (MQ=255)

                                                                                                                                             gCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCga                                                >  1:267529‑M2/2‑102 (MQ=255)

                                                                                                                                             gCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCga                                                <  2:267529‑M2/101‑1 (MQ=255)

CATCACGGCCGACCAGACCTCGGTAGCCGAGAACGTCAAACCGACCTTCACTGTGCACGTCAATCAGCCGCTGGCCCACGACCTGATCGTGACCCTGAGCAACAACGCTCAGGTCACCATCAAGGCCGGTGAAACCAGCGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTATCAGGACGCTGGCCAGATCAGCTTGGGCATCAACTCGG‑CGGTGGACGCCACTGGTGCTGCGTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACC  >  NC_002947/201322‑201610

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.