New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 383390120 (1.050)10 (0.100) 7/218 NT 7.8% intergenic (+47/‑136) PP_0319/PP_0320 hypothetical protein/methyl‑accepting chemotaxis transducer
?NC_002947 = 383406 130 (1.270)intergenic (+63/‑120) PP_0319/PP_0320 hypothetical protein/methyl‑accepting chemotaxis transducer

Only 100 of 180 total aligned reads displayed.

AGGAGCATCAGCAGACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTT  >  NC_002947/383258‑383554
                                                                                                                                                    |                                                                                                                                                    
  gAGCATCAGCAGACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACcgc                                                                                                                                                   <  2:620524‑M2/150‑4 (MQ=255)
     cATCAGCAGACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACcgcatt                                                                                                                                                <  2:1963702‑M2/150‑7 (MQ=255)
       tCAGCAGACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACcgcattcg                                                                                                                                              <  1:211384‑M2/150‑9 (MQ=255)
        cagcagACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACcgcattcgc                                                                                                                                             >  2:2545928‑M2/1‑141 (MQ=255)
         agcagACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACcgcattcgcg                                                                                                                                            <  2:2154252‑M2/150‑11 (MQ=255)
         agcagACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACcgcattcgcg                                                                                                                                            >  1:2154252‑M2/1‑140 (MQ=255)
          gcagACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCCCCGCTTCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACcgcattcgcgg                                                                                                                                           >  1:983328‑M2/1‑139 (MQ=255)
                 cTTGCGCGAACTCAAGCGCAGATCGACGCCACTGTGGATGCCAGCGTGCGTACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAAcc                                                                                                                                    >  1:1607012/1‑150 (MQ=255)
                 cTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAAcc                                                                                                                                    >  1:2740250/1‑150 (MQ=255)
                 cTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAAcc                                                                                                                                    <  1:2406682/150‑1 (MQ=255)
                  ttGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAAccc                                                                                                                                   >  1:2497094/1‑150 (MQ=255)
                    gcgcGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGc                                                                                                                                 <  1:2205386/150‑1 (MQ=255)
                              aaGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAggg                                                                                                                       >  1:580034/1‑150 (MQ=255)
                              aaGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAggg                                                                                                                       <  2:815487/150‑1 (MQ=255)
                                gcgcAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAgg                                                                                                                        <  2:197811/147‑1 (MQ=255)
                                    aGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATc                                                                                                                 >  2:1684947/1‑150 (MQ=255)
                                     gATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCt                                                                                                                <  2:1306241/150‑1 (MQ=255)
                                       tCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGa                                                                                                              <  2:1607012/150‑1 (MQ=255)
                                        cGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCCACAGGGTGCATCTGAt                                                                                                             >  2:1829551/1‑150 (MQ=255)
                                          aCGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAggg                                                                                                                       >  2:274967/1‑138 (MQ=255)
                                          aCGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAggg                                                                                                                       <  1:274967/138‑1 (MQ=255)
                                              cACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGGCCCCCCGTAGGAGCGGGTTCATCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTc                                                                                                       <  1:3011326/150‑1 (MQ=255)
                                               aCGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCa                                                                                                      <  1:620524/150‑1 (MQ=255)
                                                   tGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGc                                                                                                                                 >  1:317931/1‑119 (MQ=255)
                                                   tGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATc                                                                                                  >  1:1677423/1‑150 (MQ=255)
                                                         ccATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGa                                                                                            <  2:2997358/150‑1 (MQ=255)
                                                          cATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACcgcattcgcgg                                                                                                                                           <  2:1347588‑M2/102‑12 (MQ=255)
                                                          cATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACcgcattcgcgg                                                                                                                                           >  1:1347588‑M2/1‑91 (MQ=255)
                                                               tGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGTCTTCAACACCGCCTTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACt                                                                                      <  2:1495965/150‑1 (MQ=255)
                                                               tGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCa                                                                                                 <  1:2487874/139‑1 (MQ=255)
                                                               tGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTgg                                                                                             <  2:1893118/143‑1 (MQ=255)
                                                               tGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCACCGTAGAAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCa                                                                                                 >  2:2487874/1‑139 (MQ=255)
                                                                    aCCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTa                                                                                                                            >  2:213014/1‑107 (MQ=255)
                                                                    aCCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTa                                                                                                                            <  1:213014/107‑1 (MQ=255)
                                                                    aCCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATa                                                                                 <  2:723037/150‑1 (MQ=255)
                                                                         cGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCaa                                                                            <  1:1101479/150‑1 (MQ=255)
                                                                           cTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAgt                                                                          <  1:1832945/150‑1 (MQ=255)
                                                                            tGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACc                                                                                                                                                     <  2:1903957‑M2/74‑2 (MQ=255)
                                                                            tGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACc                                                                                                                                                     >  1:1903957‑M2/1‑73 (MQ=255)
                                                                            tGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTg                                                                                                                     <  2:3059791/106‑1 (MQ=255)
                                                                            tGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTg                                                                                                                     >  1:3059791/1‑106 (MQ=255)
                                                                               gCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGtat                                                                      <  2:2450757/150‑1 (MQ=255)
                                                                                 aaTAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATc                                                                                                                 <  2:1671085/105‑1 (MQ=255)
                                                                                  aTAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTg                                                                                              >  1:548130/1‑123 (MQ=255)
                                                                                  aTAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTg                                                                                              <  2:548130/123‑1 (MQ=255)
                                                                                  aTAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATaca                                                                   <  1:902862/150‑1 (MQ=255)
                                                                                       ccccGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCACAGCATCAGTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTc                                                              >  2:417426/1‑150 (MQ=38)
                                                                                       ccccGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTc                                                              >  1:2913095/1‑150 (MQ=255)
                                                                                         ccGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCg                                                            >  2:294845/1‑150 (MQ=255)
                                                                                          cGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGAt                                                                                  <  2:952770/127‑1 (MQ=255)
                                                                                          cGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGc                                                           <  2:2913095/150‑1 (MQ=255)
                                                                                            tACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCaa                                                         >  1:2945289/1‑150 (MQ=255)
                                                                                              ctccGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCaaaa                                                       <  1:1428937/148‑1 (MQ=255)
                                                                                                 cGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACaa                                                    >  1:355273/1‑150 (MQ=255)
                                                                                                 cGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATAAGCTAGTGTATCGACTTTCCGTAAAACaa                                                    >  2:1428937/1‑150 (MQ=38)
                                                                                                     cccccGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACaataat                                                <  1:2953094/150‑1 (MQ=255)
                                                                                                       cccGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTg                                                                                     >  1:2575140/1‑111 (MQ=255)
                                                                                                       cccGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGc                                                           <  2:502670/137‑1 (MQ=255)
                                                                                                       cccGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGc                                                           >  1:502670/1‑137 (MQ=255)
                                                                                                       cccGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTAGAGATTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAAtgt                                              <  2:1951121/150‑1 (MQ=255)
                                                                                                          gTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTc                                                                                                                               >  1:18493/1‑66 (MQ=255)
                                                                                                          gTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTc                                                                                                                               <  2:18493/66‑1 (MQ=255)
                                                                                                          gTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGa                                                                                            <  2:881296/101‑1 (MQ=255)
                                                                                                           tAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTTATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCgg                                          <  2:174114/150‑1 (MQ=255)
                                                                                                              gAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGa                                                                                                              <  2:1560658/79‑1 (MQ=255)
                                                                                                              gAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGa                                                                                                              >  1:1560658/1‑79 (MQ=255)
                                                                                                              gAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTg                                                                                     >  2:2235959/1‑104 (MQ=255)
                                                                                                              gAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGa                                       >  2:254915/1‑150 (MQ=255)
                                                                                                                   ggTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAgg                                  >  1:84982/1‑150 (MQ=255)
                                                                                                                   ggTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAgg                                  >  2:1202173/1‑150 (MQ=255)
                                                                                                                    gTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACCCTTTCCGCAAAACAATAATGTGCGGGGAGTAggg                                 <  2:2346624/150‑1 (MQ=255)
                                                                                                                    gTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAggg                                 <  1:1258669/150‑1 (MQ=255)
                                                                                                                    gTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAggg                                 >  1:1459423/1‑150 (MQ=255)
                                                                                                                    gTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAggg                                 <  1:1963702/150‑1 (MQ=255)
                                                                                                                        aCCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCAt                             >  1:1644691/1‑150 (MQ=255)
                                                                                                                         cccGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACt                                                                                               >  1:2278406/1‑83 (MQ=255)
                                                                                                                         cccGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACt                                                                                               <  2:2278406/83‑1 (MQ=255)
                                                                                                                          ccGCGAATGCGTCAGTGGCTTCAACACcgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacggtggcatccaccgtg                                                               <  2:1920986‑M2/114‑88 (MQ=255)
                                                                                                                          ccGCGAATGCGTCAGTGGCTTCAACACcgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagttcgcgcaagggtctgc                           <  2:1404278‑M2/150‑124 (MQ=255)
                                                                                                                          ccGCGAATGCGTCAGTGGCTTCAACACcgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagttcgcgcaagggtctgc                           <  2:1491003‑M2/150‑124 (MQ=255)
                                                                                                                          ccGCGAATGCGTCAGTGGCTTCAACACcgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctca                                                                                             <  2:734719‑M2/84‑58 (MQ=255)
                                                                                                                          ccGCGAATGCGTCAGTGGCTTCAACACcgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctca                                                                                             >  1:734719‑M2/1‑27 (MQ=255)
                                                                                                                          ccGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTGAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGc                           >  2:404502/1‑150 (MQ=255)
                                                                                                                          ccGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGc                           >  1:172799/1‑150 (MQ=255)
                                                                                                                          ccGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGc                           >  1:202199/1‑150 (MQ=255)
                                                                                                                            gcgAATGCGTCAGTGGCTTCAACACcgcattcgcgggtaaacccgctcctacagggtgacggtgtacgggg                                                                                                        <  1:1755376‑M2/71‑47 (MQ=255)
                                                                                                                               aaTGCGTCAGTGGCTTCAACACcgcattcgcgggtgaacccgctcctacggggggacggtgtacggggcttattgctcagcgatggtccgcacgatggcatccaccgtggcgtcgatctgcgcttgagttcgcgcaagggtctgctgatg                      >  1:1404278‑M2/1‑22 (MQ=255)
                                                                                                                                    gTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCg                 <  2:1644691/150‑1 (MQ=255)
                                                                                                                                     tCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGt                >  1:2370778/1‑150 (MQ=255)
                                                                                                                                       aGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTaa              <  1:433470/150‑1 (MQ=255)
                                                                                                                                         tGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAaga            <  2:2685169/150‑1 (MQ=255)
                                                                                                                                            cTTCAACACCGCATTCGCGGGTAAACCCGCTCCTa                                                                                                                            <  1:1503068/35‑1 (MQ=255)
                                                                                                                                            cTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCa         <  2:323180/150‑1 (MQ=255)
                                                                                                                                            cTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCa         <  1:1177751/150‑1 (MQ=255)
                                                                                                                                             ttCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTg                                                                                     >  2:2097251/1‑73 (MQ=255)
                                                                                                                                             ttCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCAt        >  1:1519901/1‑150 (MQ=255)
                                                                                                                                                  cacCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGc                  >  2:2831828/1‑135 (MQ=255)
                                                                                                                                                  cacCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGc                  <  1:2831828/135‑1 (MQ=255)
                                                                                                                                                  cacCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGt   <  2:1507567/150‑1 (MQ=255)
                                                                                                                                                   acCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGACGTAAGAGCATCCAGtt  >  2:1364723/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
AGGAGCATCAGCAGACCCTTGCGCGAACTCAAGCGCAGATCGACGCCACGGTGGATGCCATCGTGCGGACCATCGCTGAGCAATAAGCCCCGTACACCGTCCCCCCGTAGGAGCGGGTTCACCCGCGAATGCGTCAGTGGCTTCAACACCGCATTCGCGGGTAAACCCGCTCCTACAGGGTGCATCTGATTGCTTCAGATCACTGGATTAACTGGATACGCAAGTGTATACACTTTCCGCAAAACAATAATGTGCGGGGAGTAGGGGCATGCGTATCTGGCGTAAGAGCATCCAGTT  >  NC_002947/383258‑383554

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.