New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 175031497 (0.850)8 (0.080) 7/218 NT 8.0% intergenic (‑37/‑52) PP_1549/PP_1550 Cro/CI family transcriptional regulator/Cro/CI family transcriptional regulator
?NC_002947 = 1750325 97 (0.950)intergenic (‑48/‑41) PP_1549/PP_1550 Cro/CI family transcriptional regulator/Cro/CI family transcriptional regulator

Only 100 of 132 total aligned reads displayed.

CTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAG  >  NC_002947/1750177‑1750470
                                                                                                                                                    |                                                                                                                                                 
cTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGc                                                                                                                                                  >  1:2830766‑M2/1‑149 (MQ=255)
cTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGc                                                                                                                                                  >  1:1771714‑M2/1‑149 (MQ=255)
cTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGc                                                                                                                                                  >  1:165275‑M2/1‑149 (MQ=255)
  gATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGcaa                                                                                                                                                >  2:409502‑M2/1‑147 (MQ=255)
  gATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGcaa                                                                                                                                                >  2:2363698‑M2/1‑147 (MQ=255)
  gATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGcaa                                                                                                                                                <  1:2000237‑M2/150‑4 (MQ=255)
    ttCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGcaagc                                                                                                                                              <  2:1256182‑M2/150‑6 (MQ=255)
    ttCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGcaagc                                                                                                                                              >  2:2014754‑M2/1‑145 (MQ=255)
    ttCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGcaagc                                                                                                                                              >  2:752452‑M2/1‑145 (MQ=255)
    ttCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGcaagc                                                                                                                                              >  1:485393‑M2/1‑145 (MQ=255)
        gCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCGAACTGTGGGCGAAGGGTAAGAACGGGTTTGGTGAATTGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGcaagcatgc                                                                                                                                          <  1:1148148‑M2/150‑10 (MQ=255)
        gCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGcaagcatgc                                                                                                                                          <  2:1499928‑M2/150‑10 (MQ=255)
         cAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGcaagcatgct                                                                                                                                         >  2:2627304‑M2/1‑140 (MQ=255)
          aGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGcaagcatgctt                                                                                                                                        <  2:3068413‑M2/150‑12 (MQ=255)
          aGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGcaagcatgctt                                                                                                                                        <  1:164610‑M2/150‑12 (MQ=255)
            gtgtTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGcaagcatgcttga                                                                                                                                      <  1:353314‑M2/150‑14 (MQ=255)
              gtTCGCGATGTCGCGTTTGGCATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAAt                                                                                                                                    <  2:2016866/150‑1 (MQ=255)
                  gcgATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGcaa                                                                                                                                                <  2:2778064‑M2/134‑4 (MQ=255)
                  gcgATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGcaa                                                                                                                                                >  1:2778064‑M2/1‑131 (MQ=255)
                  gcgATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCt                                                                                                                                <  1:1648058/150‑1 (MQ=255)
                   cgATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTg                                                                                                                               <  2:353314/150‑1 (MQ=255)
                   cgATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTg                                                                                                                               >  2:2031905/1‑150 (MQ=255)
                     aTGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGa                                                                                                                             <  1:1047870/150‑1 (MQ=255)
                          gcgTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGc                                                                                                                        >  1:3057109/1‑150 (MQ=255)
                          gcgTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGc                                                                                                                        <  1:1499928/150‑1 (MQ=255)
                              ttGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCagag                                                                                                                    <  2:2555153/150‑1 (MQ=255)
                              ttGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCagag                                                                                                                    <  1:2430177/150‑1 (MQ=255)
                                gACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAgagga                                                                                                                  <  2:1031767/150‑1 (MQ=255)
                                gACATTGCGAACGACCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAgagga                                                                                                                  <  1:102975/150‑1 (MQ=255)
                                  cATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGaggagg                                                                                                                <  2:3057109/150‑1 (MQ=255)
                                         aaCGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCAt                                                                                                         <  2:1042175/150‑1 (MQ=255)
                                           cGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGa                                                                                                       <  1:1787240/150‑1 (MQ=255)
                                           cGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGa                                                                                                       <  1:3068413/150‑1 (MQ=255)
                                            gCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGcaagcatgctt                                                                                                                                        >  2:490344‑M2/1‑105 (MQ=255)
                                              ccAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGCATGCCTGGACGAGCAGAGGAGGTGGCCATGACCa                                                                                                    >  1:881400/1‑150 (MQ=255)
                                                aaCTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTAGAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGGATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAag                                                                                                  >  2:2212890/1‑150 (MQ=255)
                                                 aCTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAaga                                                                                                 <  2:2000237/150‑1 (MQ=255)
                                                 aCTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAaga                                                                                                 <  1:1256182/150‑1 (MQ=255)
                                                   tgtgGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGc                                                                                               >  2:2046322/1‑150 (MQ=255)
                                                     tgGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCa                                                                                             >  2:1290070/1‑150 (MQ=255)
                                                      gggCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAg                                                                                            <  1:2270554/150‑1 (MQ=255)
                                                       ggCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAgg                                                                                           <  2:164610/150‑1 (MQ=255)
                                                        gCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGc                                                                                          <  1:2430102/150‑1 (MQ=255)
                                                            cGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATc                                                                                      <  1:2046322/150‑1 (MQ=255)
                                                                tCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAAc                                                                                  >  1:1078832/1‑150 (MQ=255)
                                                                  aGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTTAATGCCTGGACGAGCagag                                                                                                                    >  2:2888990/1‑114 (MQ=255)
                                                                  aGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTTAATGCCTGGACGAGCagag                                                                                                                    <  1:2888990/114‑1 (MQ=255)
                                                                    gACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACGttt                                                                              >  1:530715/1‑150 (MQ=255)
                                                                         gTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCCAGAGCCAGGCAATCCAACATTTCTGGt                                                                         <  2:1442896/150‑1 (MQ=255)
                                                                             ggTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCgg                                                                           >  2:133107/1‑144 (MQ=255)
                                                                              gTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTAtt                                                                    >  1:2915439/1‑150 (MQ=255)
                                                                               tGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTAttt                                                                   >  2:2043586/1‑150 (MQ=255)
                                                                                 aTTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCa                                                                 >  2:1416964/1‑150 (MQ=255)
                                                                                  ttCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAg                                                                <  1:1416964/150‑1 (MQ=255)
                                                                                  ttCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAg                                                                >  2:2894148/1‑150 (MQ=255)
                                                                                     gATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGccc                                                             >  1:1926309/1‑150 (MQ=255)
                                                                                      aTCAGTAGGTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCt                                                            >  2:2152749/1‑150 (MQ=255)
                                                                                       tCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTg                                                           <  2:1078832/150‑1 (MQ=255)
                                                                                             gtTTTCATTCGCGCAATCTACGAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCaa                                                                                   <  1:2155928/120‑1 (MQ=255)
                                                                                             gtTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAg                                                     >  1:843291/1‑150 (MQ=255)
                                                                                             gtTATCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAg                                                     >  2:897584/1‑150 (MQ=255)
                                                                                              ttttCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAg                                                                                            <  1:2665255/110‑1 (MQ=255)
                                                                                                 tCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCCAGAGCGAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGgcgc                                                 <  1:2857913/150‑1 (MQ=255)
                                                                                                      cgcgCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAggg                                            <  1:1290070/150‑1 (MQ=255)
                                                                                                      cgcgCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAggg                                            <  2:2915439/150‑1 (MQ=255)
                                                                                                      cgcgCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAggg                                            <  2:2073639/150‑1 (MQ=255)
                                                                                                       gcgcAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCgg                                                                           <  1:2622564/118‑1 (MQ=255)
                                                                                                       gcgcAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCgg                                                                           >  2:2622564/1‑118 (MQ=255)
                                                                                                            aTCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGAcc                                      <  2:2500368/150‑1 (MQ=255)
                                                                                                               tACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTAt                                   >  2:2671745/1‑150 (MQ=255)
                                                                                                                aCAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGc                                                         <  2:2813978/127‑1 (MQ=255)
                                                                                                                 cAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGa                                 <  2:1697498/150‑1 (MQ=255)
                                                                                                                  aaGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAg                                <  1:3059371/150‑1 (MQ=255)
                                                                                                                  aaGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAg                                <  1:2031905/150‑1 (MQ=255)
                                                                                                                     gTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCa                                                                                                                       <  2:556960/60‑1 (MQ=255)
                                                                                                                     gTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCa                                                                                                                       >  1:556960/1‑60 (MQ=255)
                                                                                                                        gCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTc                          >  1:2844132/1‑150 (MQ=255)
                                                                                                                         cTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTAt                                                                     <  2:2319532/106‑1 (MQ=255)
                                                                                                                         cTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTAt                                                                     >  1:2319532/1‑106 (MQ=255)
                                                                                                                          ttGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCg                        >  2:2446548/1‑150 (MQ=255)
                                                                                                                            gTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGcc                      >  2:573295/1‑150 (MQ=255)
                                                                                                                               aaGCATGCTTGTTTTGACTATGCACGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAAt                   <  2:881400/150‑1 (MQ=255)
                                                                                                                                 gCATGCTTGTTTTGAATATGcaagcatgcttgacaagcaaccttgtagattgcgcgaatgaaaactactgatcgaatcaccaaactcgtcctgaccc                                                                      >  2:1611340‑M2/1‑20 (MQ=255)
                                                                                                                                   aTGCTTGTTTTGAATATGcaagcatgcttgacaagcaaccttgtagattgcgcgaatgaaaactactgatcgaatcaccaaactcgtcctgacccgtcgcccacagttgggcgttcgcaatgtcaaacgcgacatcgcgaacacctgcgg               <  2:2148457‑M2/150‑133 (MQ=255)
                                                                                                                                   aTGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGc               <  1:1413676/150‑1 (MQ=255)
                                                                                                                                    tGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGATGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCg              >  1:2239337/1‑150 (MQ=255)
                                                                                                                                     gCTTGTTTTGAATATGcaagcatgcttgacaagcaaccttgtagattgcgcgaatgaaaac                                                                                                      >  1:2065328‑M2/1‑16 (MQ=255)
                                                                                                                                     gCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCgg             >  1:450884/1‑150 (MQ=255)
                                                                                                                                      cTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGa            <  1:2019158/150‑1 (MQ=255)
                                                                                                                                       ttGTTTTGAATATGcaagcatgcttgacaagcaaccttgtagattgcgcgaatgaaaactactgatcgaatcaccaaactcgtcctgacccgtcgcccacagttgggcgttcgcaatgtcaaacgcgacatcgcgaacacctgcggaatc           <  1:1093006‑M2/150‑137 (MQ=255)
                                                                                                                                        tGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCCATTGGCGGacg          <  2:2546213/150‑3 (MQ=255)
                                                                                                                                            ttGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTcc      <  1:2894148/150‑1 (MQ=255)
                                                                                                                                            ttGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTcc      >  1:878234/1‑150 (MQ=255)
                                                                                                                                            ttGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTcc      >  2:581873/1‑150 (MQ=255)
                                                                                                                                              gAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGa                                                                                                       <  1:2509352/51‑1 (MQ=255)
                                                                                                                                              gAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGa                                                                                                       >  2:2509352/1‑51 (MQ=255)
                                                                                                                                              gAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCATTCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAggg                                            <  2:493151/110‑1 (MQ=255)
                                                                                                                                              gAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCATTCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAggg                                            >  1:493151/1‑110 (MQ=255)
                                                                                                                                               aaTATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTc       >  1:984089/1‑146 (MQ=255)
                                                                                                                                                atatGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTGCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAg  <  1:2212890/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
CTGATTCCGCAGGTGTTCGCGATGTCGCGTTTGACATTGCGAACGCCCAACTGTGGGCGACGGGTCAGGACGAGTTTGGTGATTCGATCAGTAGTTTTCATTCGCGCAATCTACAAGGTTGCTTGTCAAGCATGCTTGTTTTGAATATGCAAGCATGCTTGAATGCCTGGACGAGCAGAGGAGGTCGCCATGACCAAGAGCCAGGCAATCCAACATTTCGGGTCTATTTCAGCCCTGGCGAAGGCGCTAGGGGTGACCTATGAGGCCGTCCGCCAATGGGCGGATGTTCCTGAG  >  NC_002947/1750177‑1750470

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.