BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2980458 =	110 (0.960)	6 (0.050)	4/236	NT	5.6%	coding (232/321 nt)	PP_2606	hypothetical protein
*	?	NC_002947	2980493 =	97 (0.880)	6 (0.050)	4/236	NT	5.6%	coding (197/321 nt)	PP_2606	hypothetical protein

Only 100 of 122 total aligned reads displayed.

TGTTGGAAGAAGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCACCTCGAGTGCGTGGCTTTGGTACAGGGCCAGCCA  >  NC_002947/2980346‑2980638

tGTTGGAAGAAGTGGCGTGTGGCTTACTGTAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGt                                                                                                                                                 <  1:1648221/150‑1 (MQ=255)

    ggAAGAAGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCa                                                                                                                                             >  1:2318445/1‑150 (MQ=255)

     gaagaaGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCAt                                                                                                                                            >  1:1499472/1‑150 (MQ=255)

     gaagaaGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCACCATGGCTGCGCGGCGTGCCAt                                                                                                                                            >  2:1550854/1‑150 (MQ=255)

      aagaagTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATg                                                                                                                                           <  2:1499472/150‑1 (MQ=255)

           gTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGgtc                                                                                                                                      <  1:1116463/150‑1 (MQ=255)

           gTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGgtc                                                                                                                                      >  2:2500015/1‑150 (MQ=255)

              gCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGgtcgtc                                                                                                                                   >  1:3029792/1‑150 (MQ=255)

               ctgggcaacctggtgggctttttcaccagcgagttcggcgacgtcaaccaagtggtgcacatctggggctatgccagcctcgacgaccgcatggcacgCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCgcggc                                                                                                                                                   >  2:552945‑M1/99‑134 (MQ=255)

               ctgggcaacctggtgggctttttcaccagcgagttcggcgacgtcaaccaagtggtgcacatctggggctatgccagcctcgacgaccgcatggcacgCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCgcggc                                                                                                                                                   >  2:553041‑M1/99‑134 (MQ=255)

               ctgggcaacctggtgggctttttcaccagcgagttcggcgacgtcaaccaagtggtgcacatctggggctatgccagcctcgacgaccgcatggcacgCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCgcggc                                                                                                                                                   <  1:552945‑M1/36‑1 (MQ=255)

                  gtgGCTTACTGCAGCGGTGAGAACCCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAgg                                                                                                                               <  1:2185560/150‑1 (MQ=255)

                    ggCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCt                                                                                                                             <  1:302032/150‑1 (MQ=255)

                     gCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTg                                                                                                                            >  2:1629144/1‑150 (MQ=255)

                     gCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTg                                                                                                                            <  2:2011783/150‑1 (MQ=255)

                     gCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTg                                                                                                                            <  1:2736962/150‑1 (MQ=255)

                      cTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTgg                                                                                                                           >  2:76670/1‑150 (MQ=255)

                       ttACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGgtcgtc                                                                                                                                   <  1:2408268/141‑1 (MQ=255)

                       ttACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGgtcgtc                                                                                                                                   >  2:2408268/1‑141 (MQ=255)

                       ttACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGc                                                                                                                          >  1:1879516/1‑150 (MQ=255)

                           tGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGt                                                                                                                                                 >  1:463028/1‑123 (MQ=255)

                           tGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGt                                                                                                                                                 <  2:463028/123‑1 (MQ=255)

                           tGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAg                                                                                                                      >  2:2045933/1‑150 (MQ=255)

                              aGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCTCCAGGGCTGCG‑CTCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGccc                                                                                                                   <  1:1725131/150‑1 (MQ=255)

                                cGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCa                                                                                                                 <  2:1879516/150‑1 (MQ=255)

                                     agaAACCGGTCGGGCGCAGCCGTCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGAtgt                                                                                                            <  2:670864/150‑1 (MQ=255)

                                       aaaCCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGAGGTCGTCGAGGCTGGCATAGCCCCAGATGTGc                                                                                                          >  2:1748831/1‑150 (MQ=255)

                                       aaaCCGGTCGGGCGCAGCAGCCGCGATTGCAGGAGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGGCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGc                                                                                                          >  1:1779334/1‑150 (MQ=255)

                                        aaCCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGca                                                                                                         <  2:2318445/150‑1 (MQ=255)

                                                gggCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTgg                                                                                                 <  1:2045933/150‑1 (MQ=255)

                                                  gcgcAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGtt                                                                                               <  1:3042950/150‑1 (MQ=255)

                                                     cagcagCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGAc                                                                                            <  2:3029792/150‑1 (MQ=255)

                                                     cagcagCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGAc                                                                                            <  2:2771768/150‑1 (MQ=255)

                                                               caagtggtgcacatctggggctatgccagcctcgacgaccgcatggcacgCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGt                                                                                                                                                 <  1:1741633‑M1/38‑1 (MQ=255)

                                                                 ttGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTc                                                                                >  2:2347811/1‑150 (MQ=255)

                                                                     aGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCg                                                                                                                                         >  2:2311790/1‑89 (MQ=255)

                                                                     aGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTg                                                                            <  1:2347811/150‑1 (MQ=255)

                                                                     aGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGACTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTg                                                                            <  1:2184481/150‑1 (MQ=255)

                                                                       gcgcAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGc                                                                                                                                               >  1:1761936/1‑81 (MQ=255)

                                                                       gcgcAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGc                                                                                                                                               <  2:1761936/81‑1 (MQ=255)

                                                                       gcgcAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGc                                                                                                                     >  1:1306385/1‑107 (MQ=255)

                                                                       gcgcAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGc                                                                                                                     <  2:1306385/107‑1 (MQ=255)

                                                                       gcgcAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGt                                                                          >  2:1949606/1‑150 (MQ=255)

                                                                         gcAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGa                                                                        >  1:2163001/1‑150 (MQ=255)

                                                                         gcAGTACCGCGCCCAGCT‑AGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGa                                                                        >  2:276069/1‑150 (MQ=255)

                                                                             tACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACTTCGc                                                                                       >  1:1167010/1‑131 (MQ=255)

                                                                             tACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGc                                                                                       <  2:1167010/131‑1 (MQ=255)

                                                                              aCCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCGTGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGGGAAAAAg                                                                   >  1:1111147/1‑150 (MQ=255)

                                                                                cgcgCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCTATGGCTGCGCGGCGTg                                                                                                                                                >  2:487201/1‑71 (MQ=255)

                                                                                cgcgCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCTATGGCTGCGCGGCGTg                                                                                                                                                <  1:487201/71‑1 (MQ=255)

                                                                                cgcgCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGt                                                                                                                                                 <  2:2104913/70‑1 (MQ=255)

                                                                                cgcgCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGt                                                                                                                                                 >  1:2104913/1‑70 (MQ=255)

                                                                                cgcgCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGcac                                                                                                        <  2:1236831/111‑1 (MQ=255)

                                                                                cgcgCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTg                                                                                              >  1:2194030/1‑121 (MQ=255)

                                                                                cgcgCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTg                                                                                              <  2:2194030/121‑1 (MQ=255)

                                                                                cgcgCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGcc                                                                 >  1:1473811/1‑150 (MQ=255)

                                                                                   gcCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCccac                                                              >  1:1131004/1‑150 (MQ=255)

                                                                                     ccAGCT‑CGCGGTTCCGTAGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGCCGTCCCGCCTGGCATACCCCCAGACTTGCACCCCTTCGTCGCCCTCGCCCAACTCGCTGGTGAAAATGCccacaa                                                            >  2:385328/1‑148 (MQ=255)

                                                                                      cAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAg                                                           <  2:2702960/150‑1 (MQ=255)

                                                                                       aGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAgg                                                          <  1:76670/150‑1 (MQ=255)

                                                                                         cT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTgg                                                                                                 >  2:294560/1‑109 (MQ=255)

                                                                                         cT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGtt                                                        <  1:2500015/150‑1 (MQ=255)

                                                                                         cT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGtt                                                        >  2:1606934/1‑150 (MQ=255)

                                                                                          t‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTg                                                       >  1:1776451/1‑150 (MQ=255)

                                                                                              cgGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGccc                                                    <  1:2299085/150‑1 (MQ=255)

                                                                                                gTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCATGTTGCCCAg                                                  <  2:2163001/150‑1 (MQ=255)

                                                                                                  tGCTTCGCTAGAATTCCGTCCAGCGAGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGTCTCCTATGTGCACTACTTGGTTGACGTCGCCGAACTCGCTGGTGAATAAGCCCACCAGGTTGCCCAGgt                                                <  2:2130728/150‑1 (MQ=255)

                                                                                                   gCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGgt                                                >  2:744792/1‑149 (MQ=255)

                                                                                                   gCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGgt                                                <  1:744792/149‑1 (MQ=255)

                                                                                                     gTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGtt                                             >  2:2117292/1‑150 (MQ=255)

                                                                                                        gcgAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAAc                                                                                  <  1:2333179/110‑1 (MQ=255)

                                                                                                          gagaATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGcac                                                                                                        <  2:2804200/86‑1 (MQ=255)

                                                                                                          gagaATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGcac                                                                                                        >  1:2804200/1‑86 (MQ=255)

                                                                                                          gagaATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGctc                                        >  1:254871/1‑150 (MQ=255)

                                                                                                          gagaATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGctc                                        >  2:2534183/1‑150 (MQ=255)

                                                                                                           agaATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGAGATCggaag                                       >  1:2970128/1‑146 (MQ=255)

                                                                                                            gaATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTg                                      <  2:1357915/150‑1 (MQ=255)

                                                                                                             aaTTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGc                                     <  2:2157194/150‑1 (MQ=255)

                                                                                                              acgccgcgcagccatggcggcagactcgcgctgggcggCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTg                                                                                                  <  1:1741633‑M2/50‑1 (MQ=255)

                                                                                                              acgccgcgcagccatggcggcagactcgcgctgggcggCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTg                                                                                                  >  2:1741633‑M2/39‑88 (MQ=255)

                                                                                                               ttCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGAtgt                                                                                                            >  1:2061760/1‑77 (MQ=255)

                                                                                                               ttCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGAtgt                                                                                                            <  2:2061760/77‑1 (MQ=255)

                                                                                                               ttCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCAc                                   <  1:1606934/150‑1 (MQ=255)

                                                                                                               ttCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCAc                                   >  2:1685869/1‑150 (MQ=255)

                                                                                                                gccgcgcagccatggcggcagactcgcgctgggcggCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAg                                                  <  1:552945‑M2/98‑1 (MQ=255)

                                                                                                                gccgcgcagccatggcggcagactcgcgctgggcggCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAg                                                  >  2:552945‑M2/37‑134 (MQ=255)

                                                                                                                gccgcgcagccatggcggcagactcgcgctgggcggCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAg                                                  <  1:553041‑M2/98‑1 (MQ=255)

                                                                                                                     ccAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGTTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAg                                                  >  1:1352769/1‑129 (MQ=255)

                                                                                                                     ccAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGTTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAg                                                  <  2:1352769/129‑1 (MQ=255)

                                                                                                                     ccAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCACCTCGAg                             >  1:2047115/1‑150 (MQ=255)

                                                                                                                     ccAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTAGCTGGTG‑AAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCACCTCGAGt                            <  2:1963507/150‑1 (MQ=255)

                                                                                                                          gcgAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCACCTCGAGTGCGt                        <  2:3015040/150‑1 (MQ=255)

                                                                                                                             aGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGCGGATGGCCTAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCACCTCGAGTGCGTGGc                     >  1:537251/1‑150 (MQ=255)

                                                                                                                                cTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCACCTCGAGTGCGTGGCttt                  <  1:2534183/150‑1 (MQ=255)

                                                                                                                                  gccgccATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGgtgt                                              >  1:1850164/1‑120 (MQ=255)

                                                                                                                                  gccgccATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCACCTCGAGTGCGTGGCTTTgg                <  2:2519696/150‑1 (MQ=255)

                                                                                                                                  gccgccATGGCTGCGCGGCGTGCCATGCGGTAGTCGAGCCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCACCTCGAGTGCGTGGCTTTgg                <  2:1779696/150‑1 (MQ=255)

                                                                                                                                      ccATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCACCTCGAGTGCGTGGCTTTGGTACa            >  1:116850/1‑150 (MQ=255)

                                                                                                                                             tGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCACCTCGAGTGCGTGGCttt                  <  1:567299/137‑1 (MQ=255)

                                                                                                                                             tGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCACCTCGAGTGCGTGGCttt                  >  2:567299/1‑137 (MQ=255)

TGTTGGAAGAAGTGGCGTGTGGCTTACTGCAGCGGTGAGAAACCGGTCGGGCGCAGCAGCCGCGATTGCAGGCGCAGTACCGCGCCCAGCT‑CGCGGTTGCGTCGCGAGAATTCCGCCCAGCGCGAGTCTGCCGCCATGGCTGCGCGGCGTGCCATGCGGTCGTCGAGGCTGGCATAGCCCCAGATGTGCACCACTTGGTTGACGTCGCCGAACTCGCTGGTGAAAAAGCCCACCAGGTTGCCCAGGTGTTCGCTCTGCACCTCGAGTGCGTGGCTTTGGTACAGGGCCAGCCA  >  NC_002947/2980346‑2980638

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.