New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4159113 =83 (0.730)9 (0.090) 9/218 NT 11.2% intergenic (+17/‑192) PP_3661/PP_3662 membrane protein/hypothetical protein
?NC_002947 4159201 = 68 (0.660)intergenic (+105/‑104) PP_3661/PP_3662 membrane protein/hypothetical protein

Only 100 of 103 total aligned reads displayed.

GGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAGCCCCAAAGGCA  >  NC_002947/4159052‑4159350
                                                                                                                                                     |                                                                                                                                                      
ggggggCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAgcagg                                                                                                                                                        >  2:2665613/1‑150 (MQ=255)
ggggggCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAgcagg                                                                                                                                                        <  2:1456938/150‑1 (MQ=255)
ccataccgagaaatgtggacggcaacgaggggggctgtgaaaaaccttgagaccgagctgcCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAgcagg                                                                                                                                                        >  1:1610594‑M1/62‑150 (MQ=255)
 gggggCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTCCCTCGCGACGCACTCGCCAGCTCAGGGGCCAGACGCTGGCCTAGAGGTGTGTGCTGCCCTTAAGACTGCAAGGCCCCTGTATGAGCGGGTTCACCCGCGAAgcaggc                                                                                                                                                       <  2:2649299/150‑1 (MQ=255)
 gggggCCGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAgcaggc                                                                                                                                                       <  1:2184997/150‑1 (MQ=255)
             ttACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCa                                                                                                                                           >  2:15799/1‑150 (MQ=255)
              tACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCaa                                                                                                                                          <  1:865289/150‑1 (MQ=255)
                 ccTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGt                                                                                                                                       >  2:1663201/1‑150 (MQ=255)
                   tGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCTGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGACGCCGGCAGGTCGGCCTCTAGGctt                                                                                                                                     >  2:1428161/1‑150 (MQ=38)
                     ggggTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGttttt                                                                                                                                   <  2:287388/150‑1 (MQ=255)
                           cAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGttt                                                                                                                                     >  1:581260/1‑142 (MQ=255)
                           cAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGttt                                                                                                                                     <  2:581260/142‑1 (MQ=255)
                             gAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGcc‑c                                                                                                                          >  2:3032842/1‑150 (MQ=255)
                                           gACTGGAGCCCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTc                                                                                                            <  2:1540903/150‑1 (MQ=255)
                                                gcatttgAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAACGGGTTCACCCGAGAAGCAAGCAACTAGGTCTCAAGGCTTTTTACGGCC‑GCCCTCGTTGCCGTCCACAt                                                                                                       >  1:2123864/7‑150 (MQ=38)
                                                     cGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTtctc                                                                                                  >  2:180719/1‑150 (MQ=255)
                                                       aGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCgg                                                                                                <  1:1770375/150‑1 (MQ=255)
                                                         tCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGt                                                                                                                                               <  1:290072/102‑1 (MQ=255)
                                                         tCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGt                                                                                                                                               >  2:290072/1‑102 (MQ=255)
                                                          cGGCTGCTTCGCTGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTAt                                                                                             <  1:1428161/150‑1 (MQ=255)
                                                            gctgctTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTAtgg                                                                                           >  1:1785645/1‑150 (MQ=255)
                                                            gctgctTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTAtgg                                                                                           >  1:484076/1‑150 (MQ=255)
                                                            cctgcttcgcgggtgaacccgctcctacaggggccttgccgtcttcagggcagcacccacctgtaggagcgggtttacccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTAtgg                                                                                           >  1:1610594‑M2/90‑150 (MQ=255)
                                                              tgcttcgcgggtgaacccgctcctacaggggccttgccgtcttcagggcagcacccacctgtaggagcgggtttacccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTAtggtg                                                                                         >  2:208163‑M2/88‑150 (MQ=255)
                                                              TGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTAtggtg                                                                                         <  2:1464363‑M1/150‑1 (MQ=255)
                                                                 TTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGgtggtg                                                                                      <  1:269963‑M1/150‑1 (MQ=255)
                                                                      GGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCaaa                                                                                 <  2:1932260‑M1/150‑1 (MQ=255)
                                                                       GGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAaag                                                                                <  1:1020609‑M1/150‑1 (MQ=255)
                                                                        GTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAg                                                                                                                                         >  1:2406853‑M1/1‑93 (MQ=255)
                                                                        GTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAg                                                                                                                                         <  2:2406853‑M1/93‑1 (MQ=255)
                                                                         TAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAaagaa                                                                              >  1:180719‑M1/1‑150 (MQ=255)
                                                                         TAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAaagaa                                                                              >  1:3032842‑M1/1‑150 (MQ=255)
                                                                          aaaCCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGCGCGGGTACACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAaagaag                                                                             <  1:2665613/150‑1 (MQ=255)
                                                                           aaCCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGtt                                                                                                                  <  2:1057601/112‑1 (MQ=255)
                                                                           aaCCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGtt                                                                                                                  >  1:1057601/1‑112 (MQ=255)
                                                                           aaCCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAgg                                                                            >  1:3027386/1‑150 (MQ=255)
                                                                           aaCCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAgg                                                                            <  2:484076/150‑1 (MQ=255)
                                                                             cccGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGtttt                                                                                                                                    >  2:1592670/1‑93 (MQ=255)
                                                                             cccGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGtttt                                                                                                                                    <  1:1592670/93‑1 (MQ=255)
                                                                              ccgctcctacatgtacctagccgtcttcagggcatcacccacctgtaggagcgggttcacccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCTTTTGCTGCCGTCCACATTTCACGGTCTTGTGGTGTCAAAGAAGGATg                                                                         >  2:1724345‑M2/72‑150 (MQ=255)
                                                                              ccGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAaagaag                                                                             >  2:478219/1‑146 (MQ=255)
                                                                              ccGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATg                                                                         >  1:1956547/1‑150 (MQ=255)
                                                                              ccGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTATCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAaagaag                                                                             <  1:478219/146‑1 (MQ=255)
                                                                               cgctcctacaggggccttgccgtcttcagggcagcacccacctgtaggagcgggtttacccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGt                                                                        <  1:208163‑M2/80‑1 (MQ=255)
                                                                                gCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAaagaa                                                                              >  2:1708089/1‑143 (MQ=255)
                                                                                gCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAaagaa                                                                              <  1:1708089/143‑1 (MQ=255)
                                                                                 cTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCg                                                                                                 <  2:2959962/123‑1 (MQ=255)
                                                                                   ccTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTa                                                                    <  1:1663201/150‑1 (MQ=255)
                                                                                    cTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTAc                                                                   >  2:3000933/1‑150 (MQ=255)
                                                                                     tACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTAcc                                                                  >  1:567214/1‑150 (MQ=255)
                                                                                        aGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAaagaa                                                                              <  1:680160/135‑1 (MQ=255)
                                                                                        aGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAaagaa                                                                              >  2:680160/1‑135 (MQ=255)
                                                                                        aGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGc                                                               >  1:788439/1‑150 (MQ=255)
                                                                                          gtgggtgCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGtt                                                                                                                                      <  2:2886466/78‑1 (MQ=255)
                                                                                          gtgggtgCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGtt                                                                                                                                      >  1:2886466/1‑78 (MQ=255)
                                                                                          gggccttgccgtcttcagggcagcacccacctgtaggagcgggtttacccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTc                                                                                                                                  <  2:384009‑M2/23‑1 (MQ=255)
                                                                                          gggccttgccgtcttcagggcagcacccacctgtaggagcgggtttacccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTc                                                                                                                                  >  1:384009‑M2/60‑82 (MQ=255)
                                                                                           tgggtgCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGcaca                                                            <  2:269963/150‑1 (MQ=255)
                                                                                               tgctgcCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCCATCGCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGcaca                                                            <  1:969654/146‑1 (MQ=255)
                                                                                                 ctgcCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGgtggtg                                                                                      >  2:379599/1‑118 (MQ=255)
                                                                                                 ctgcCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGgtggtg                                                                                      <  1:379599/118‑1 (MQ=255)
                                                                                                  tgcCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGa                                                     >  1:342605/1‑150 (MQ=255)
                                                                                                    cccTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGa                                                     <  1:205200/148‑1 (MQ=255)
                                                                                                    cccTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGa                                                     >  2:205200/1‑148 (MQ=255)
                                                                                                    cccTGAAGACGGCAAGGCCCCTGTACGCGCGGGTTTACGCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCAAAGCC‑CCCCTCGTTGCCGTCCCCATTTCTCTGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACt                                                   >  1:728685/1‑150 (MQ=255)
                                                                                                      cTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTa                                                 >  2:2378707/1‑150 (MQ=255)
                                                                                                      cTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTa                                                 >  2:1844405/1‑150 (MQ=255)
                                                                                                        gAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGa                                               <  1:3000933/150‑1 (MQ=255)
                                                                                                        gAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGa                                               <  2:2667231/150‑1 (MQ=255)
                                                                                                           gACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGc                                            <  1:1464363/150‑1 (MQ=255)
                                                                                                           gACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGc                                            <  1:1932260/150‑1 (MQ=255)
                                                                                                              ggCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGAt                                                                          <  2:395061/117‑1 (MQ=255)
                                                                                                              ggCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGAt                                                                          >  1:395061/1‑117 (MQ=255)
                                                                                                               gCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCa                                        >  1:2096999/1‑150 (MQ=255)
                                                                                                                cAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCaa                                       >  2:1819326/1‑150 (MQ=255)
                                                                                                                  acccacctgtaggagcgggtttacccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACg                                     >  1:717246‑M2/36‑150 (MQ=255)
                                                                                                                  aGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACg                                     >  2:2725272/1‑150 (MQ=255)
                                                                                                                   ggCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTAtggtgg                                                                                        >  1:2769472/1‑98 (MQ=255)
                                                                                                                   ggCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTAtggtgg                                                                                        <  2:2769472/98‑1 (MQ=255)
                                                                                                                    gCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTAtggtgg                                                                                        <  1:1624134/97‑1 (MQ=255)
                                                                                                                    gCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTAtggtgg                                                                                        >  2:1624134/1‑97 (MQ=255)
                                                                                                                      cccTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCAt                                 >  1:1220903/1‑150 (MQ=255)
                                                                                                                              gcgCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTC‑CAGCCAGTCCGCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCaa                         <  1:1724345/148‑1 (MQ=255)
                                                                                                                              gagcgggtttacccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCaa                         <  2:1610594‑M2/127‑1 (MQ=255)
                                                                                                                              gAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATg                                                                         <  1:1801000/102‑1 (MQ=255)
                                                                                                                              gAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATg                                                                         >  2:1801000/1‑102 (MQ=255)
                                                                                                                                gCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATg                       >  1:2390564/1‑150 (MQ=255)
                                                                                                                                     tttacccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCACTGCATcc                  >  2:687782‑M2/17‑150 (MQ=255)
                                                                                                                                         cccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCa              <  1:1800949‑M2/138‑1 (MQ=255)
                                                                                                                                          ccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAg             >  1:2673409‑M2/12‑150 (MQ=255)
                                                                                                                                          ccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAg             >  1:46206‑M2/12‑150 (MQ=255)
                                                                                                                                          ccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAg             <  2:342605‑M2/139‑1 (MQ=255)
                                                                                                                                          ccgcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCAACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAg             >  1:1406398‑M2/12‑150 (MQ=255)
                                                                                                                                          ccgcgaagcagGCAGCTCGGTCTCAAGGATTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATTTGGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCACTGCATCCGTCAg             >  1:993988‑M2/12‑150 (MQ=255)
                                                                                                                                            gcgaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCAACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAGcc           <  2:1406398‑M2/141‑1 (MQ=255)
                                                                                                                                              gaagcagGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAGcccc         <  2:788439‑M2/143‑1 (MQ=255)
                                                                                                                                                 gcagGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAGCCCCaaa      >  1:2976160‑M2/5‑150 (MQ=255)
                                                                                                                                                     gcagCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCt                                          <  2:2473209/110‑1 (MQ=255)
                                                                                                                                                     gcagCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCt                                          >  1:2473209/1‑110 (MQ=255)
                                                                                                                                                     gcagCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAGCCCCAAAGGCa  >  2:2984193/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
GGGGGGCTGGCGATTACCCTGGGGGTGCAGAAGCTGTTGGGCTGACTGGAGACCGAGTCGGCTGCTTCGCGGGTAAACCCGCTCCTACAGGTGGGTGCTGCCCTGAAGACGGCAAGGCCCCTGTAGGAGCGGGTTCACCCGCGAAGCAGGCAGCTCGGTCTCAAGGTTTTTCACAGCC‑CCCCTCGTTGCCGTCCACATTTCTCGGTATGGTGGTGTCAAAGAAGGATGTTTTACCCGCACAGGAAAGACTTAGATGCCTCAACGCCATGTCATCAATGCATCCGTCAGCCCCAAAGGCA  >  NC_002947/4159052‑4159350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.