New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5033687	0 (0.000)	3 (0.030)	3/226	NT	100%	coding (78/336 nt)	PP_4438	transposase
	?	NC_002947	= 5036691	NA (NA)					coding (134/336 nt)	PP_4442	transposase

CGGTGTTCGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTCGCCAATCGCCGGGCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGCC  >  NC_002947/5036643‑5036792                                                 |                                                                                                      cgctgtTCGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTCGCCAATCGCCGGGCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGcc  >  2:1526943/4‑150 (MQ=1)                                                 |                                                                                                      CGGTGTTCGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTCGCCAATCGCCGGGCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGCC  >  NC_002947/5036643‑5036792

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.