New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5653264 =127 (1.110)7 (0.060) 7/232 NT 5.7% coding (99/252 nt) PP_4962 hypothetical protein
?NC_002947 5653301 = 112 (1.030)coding (62/252 nt) PP_4962 hypothetical protein

Only 100 of 140 total aligned reads displayed.

CTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAGGCGCCACCACCGGTAGAAA  >  NC_002947/5653153‑5653450
                                                                                                                                                    |                                                                                                                                                     
cTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAg                                                                                                                                                      >  1:2701642/1‑150 (MQ=255)
 ttttCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGc                                                                                                                                                     >  2:1072530/1‑150 (MQ=255)
      cAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGcatcat                                                                                                                                                >  2:1012626/1‑150 (MQ=255)
       aGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCatcatc                                                                                                                                               <  1:1298021/150‑1 (MQ=255)
       aGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCatcatc                                                                                                                                               >  2:2712575/1‑150 (MQ=255)
       aGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGAGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCatcatc                                                                                                                                               >  1:2136543/1‑150 (MQ=255)
        ggCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCAtcatca                                                                                                                                              >  1:1866261/1‑150 (MQ=255)
         gCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGACTGGCTGGCGGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCatcatccc                                                                                                                                             >  2:1493092/1‑148 (MQ=255)
            ttCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAgg                                                                                                                                          >  1:1393614/1‑150 (MQ=255)
             tCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCGGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGc                                                                                                                                         >  2:1444261/1‑150 (MQ=255)
               cGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCaa                                                                                                                                       >  1:2475670/1‑150 (MQ=255)
                gggCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAAt                                                                                                                                      >  1:1529021/1‑150 (MQ=255)
                   cccACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGt                                                                                                                                   <  2:121580/150‑1 (MQ=255)
                     cACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGttt                                                                                                                                 <  1:337841/150‑1 (MQ=255)
                      aCGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTg                                                                                                                                >  1:526275/1‑150 (MQ=255)
                       cgcgCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGa                                                                                                                               <  2:2921606/150‑1 (MQ=255)
                        gcgcTTGCCGATGACCGGCACAGTCTCGGCCTGCCGGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGac                                                                                                                              <  1:1444261/150‑1 (MQ=255)
                            ttGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGaccacc                                                                                                                          >  1:2586927/1‑150 (MQ=255)
                               ccGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAgg                                                                                                                       <  1:1915869/150‑1 (MQ=255)
                                cGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGcatc                                                                                                                                                  >  2:1766801/1‑122 (MQ=255)
                                cGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGcatc                                                                                                                                                  <  1:1766801/122‑1 (MQ=255)
                                           acaGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTccc                                                                                                               <  1:2901159/146‑1 (MQ=255)
                                           acaGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTg                                                                                                           >  2:2434145/1‑150 (MQ=255)
                                               tccgatccTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGTATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCaa                                                                                                       <  1:2202019/144‑1 (MQ=255)
                                                   ggCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAgcgc                                                                                                   <  2:1148123/150‑1 (MQ=255)
                                                   ggCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAgcgc                                                                                                   >  2:1483032/1‑150 (MQ=255)
                                                   ggCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAgcgc                                                                                                   >  2:2798482/1‑150 (MQ=255)
                                                    gCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAgg                                                                                                                       >  1:1822007/1‑129 (MQ=255)
                                                      cTGCCAGTCGGACTGATAGAAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAggcctga                                                                                                >  2:1519437/1‑144 (MQ=255)
                                                       tGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGAAAGCGCTCAGCAGACCGGCCAGCATCATCGCAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGAc                                                                                               <  1:375936/150‑1 (MQ=255)
                                                           aGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGacc                                                                                                                             <  2:2654987/116‑1 (MQ=255)
                                                             tCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCa                                                                                                                                                       <  2:2719961/88‑1 (MQ=255)
                                                               ggACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAg                                                                                       <  1:2712575/150‑1 (MQ=255)
                                                                   tGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCt                                                                                   >  2:2598938/1‑150 (MQ=255)
                                                                   tGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCt                                                                                   >  1:1813239/1‑150 (MQ=255)
                                                                   tGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGCACTGCCCGCGCCAGCGATAAACAAACGCCACAGCATGATCGCTGACAATAGGGAGAGCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCt                                                                                   >  2:2648589/1‑150 (MQ=255)
                                                                    gATAGCAACCGCCCTTGGGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCGTTGCCAAGCGCCGACGTCATCAGGCCtt                                                                                  <  1:502567/150‑1 (MQ=255)
                                                                     aTAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGt                                                                                                                                   <  1:392362/100‑1 (MQ=255)
                                                                     aTAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGt                                                                                                                                   >  2:392362/1‑100 (MQ=255)
                                                                     aTAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTg                                                                                 <  2:1813239/150‑1 (MQ=255)
                                                                      tAGCAACAGCCCTTGTGCGACTGCTCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTgg                                                                                >  2:1725394/1‑150 (MQ=255)
                                                                            ccGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCtt                                                                                                             >  1:154252/1‑115 (MQ=255)
                                                                            ccGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCtt                                                                                                             <  2:154252/115‑1 (MQ=255)
                                                                             cGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGctc                                                                         >  2:1660543/1‑150 (MQ=255)
                                                                               cccTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATcac                                                                                                                                             >  1:2746195/1‑80 (MQ=255)
                                                                                 ctttggCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTcc                                                                     >  2:1067230/6‑150 (MQ=255)
                                                                                  ttGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGtcatca                                                                                        >  1:1310931/1‑130 (MQ=255)
                                                                                  ttGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCa                                                                    >  2:2162860/1‑150 (MQ=255)
                                                                                   tgtgCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAg                                                                   <  1:73605/150‑1 (MQ=255)
                                                                                        gACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTg                                                              >  2:1762572/1‑150 (MQ=255)
                                                                                         aCTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGc                                                             <  1:2162860/150‑1 (MQ=255)
                                                                                         aCTGCGCCGGGTCGGCAGCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGc                                                             <  2:2586927/150‑1 (MQ=255)
                                                                                          cTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGATCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGcc                                                            <  2:83272/150‑1 (MQ=255)
                                                                                               ccGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGc                                                       >  2:2128449/1‑150 (MQ=255)
                                                                                                  ggTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTgg                                                    <  2:371351/150‑1 (MQ=255)
                                                                                                  ggTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTgg                                                    <  2:2102525/150‑1 (MQ=255)
                                                                                                  ggTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTgg                                                    <  1:1067230/150‑1 (MQ=255)
                                                                                                    tCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCa                                                  >  2:681566/1‑150 (MQ=255)
                                                                                                      ggCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAgg                                                <  2:1243965/150‑1 (MQ=255)
                                                                                                       gCATCCGAGGCCGGGCTTTCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTTTTTTTTAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGa                                               <  1:1725394/150‑1 (MQ=255)
                                                                                                        cATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGAc                                              <  1:1012626/150‑1 (MQ=255)
                                                                                                          tCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCt                                            >  2:2925509/1‑150 (MQ=255)
                                                                                                           ccGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCtt                                           <  1:1483032/150‑1 (MQ=255)
                                                                                                            cGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTg                                          >  2:2892268/1‑150 (MQ=255)
                                                                                                              aGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGcc                                        <  2:1393614/150‑1 (MQ=255)
                                                                                                                gccggtctgctgagcgcttgcgcgggcagcccggccAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAgc                                                                                                     >  2:1172149‑M2/37‑87 (MQ=255)
                                                                                                                gccggtctgctgagcgcttgcgcgggcagcccggccAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAgc                                                                                                     <  1:1172149‑M2/51‑1 (MQ=255)
                                                                                                                GCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCt                                      <  2:709583‑M1/150‑1 (MQ=255)
                                                                                                                  cggtctgctgagcgcttgcgcgggcagcccggccAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTccc                                                                                                               >  2:704087‑M2/35‑75 (MQ=255)
                                                                                                                  cggtctgctgagcgcttgcgcgggcagcccggccAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTccc                                                                                                               <  1:704087‑M2/41‑1 (MQ=255)
                                                                                                                  CGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCg                                    <  2:1554748‑M1/150‑1 (MQ=255)
                                                                                                                  CGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCg                                    <  2:1688842‑M1/150‑1 (MQ=255)
                                                                                                                   ggtctgctgagcgcttgcgcgggcagcccggccAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTcga                                   >  1:249629‑M2/34‑150 (MQ=255)
                                                                                                                   GGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGa                                   >  2:1866261‑M1/1‑150 (MQ=255)
                                                                                                                   GGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGa                                   >  1:1072530‑M1/1‑150 (MQ=255)
                                                                                                                    GGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGAc                                  >  2:2475670‑M1/1‑150 (MQ=255)
                                                                                                                          tgagcgcttgcgcgggcagcccggccAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGcc                                        >  2:905345‑M2/27‑138 (MQ=255)
                                                                                                                          ccGCGCAAGCGCTCAGCATACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCACGCGCCGACGTCATCAGGCCTTGAACTGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCTACGAACTc                            >  2:1330562/1‑150 (MQ=255)
                                                                                                                          ccGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTACCCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTc                            >  2:1516793/1‑150 (MQ=255)
                                                                                                                           cgggcAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTTACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCAGCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCg                           >  2:1974220/4‑150 (MQ=255)
                                                                                                                            gcgcAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGa                          >  1:900586/1‑150 (MQ=255)
                                                                                                                                aaGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGaa                      >  2:733108/1‑150 (MQ=255)
                                                                                                                                aaGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGaa                      >  2:1227269/1‑150 (MQ=255)
                                                                                                                                 aGCGCTCATCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAg                     <  1:923928/150‑1 (MQ=255)
                                                                                                                                  gcgcTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAAc                              >  2:344132/1‑140 (MQ=255)
                                                                                                                                  gcgcTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAgg                    <  1:1688842/150‑1 (MQ=255)
                                                                                                                                    gcTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTcc                                                                     <  1:2740416/99‑1 (MQ=255)
                                                                                                                                    gcTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTcc                                                                     >  2:2740416/1‑99 (MQ=255)
                                                                                                                                     cTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAGgcgc                 <  1:2642574/150‑1 (MQ=255)
                                                                                                                                     cTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAGgcgc                 <  1:2598938/150‑1 (MQ=255)
                                                                                                                                      tCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGct                                                                          >  1:1509141/1‑92 (MQ=255)
                                                                                                                                      tCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAGGCGcc                >  2:2242744/1‑150 (MQ=255)
                                                                                                                                        agcagACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAgc                                                                                                     <  2:341615/63‑1 (MQ=255)
                                                                                                                                        agcagACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAgc                                                                                                     >  1:341615/1‑63 (MQ=255)
                                                                                                                                           agACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAGGCGCcaccac           <  2:2919389/150‑1 (MQ=255)
                                                                                                                                            gACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAAtt                                                               >  1:461373/1‑97 (MQ=255)
                                                                                                                                            gACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAAtt                                                               <  2:461373/97‑1 (MQ=255)
                                                                                                                                                 gccAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCttt                                                                                                            <  2:1072758‑M2/44‑1 (MQ=255)
                                                                                                                                                 gccAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAGGCGCcaccac           >  2:637179‑M2/4‑144 (MQ=255)
                                                                                                                                                    aGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAGGCGCCACCACCGGTAGaaa  <  1:1227269/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
CTTTTCCAGGCCTTCCGGGCCCACGCGCTTGCCGATGACCGGCACAGTCTCGGCCTGCCAGTCGGACTGATAGCAACCGCCCTTGTGCGACTGCGCCGGGTCGGCATCCGAGGCCGGGCTGCCCGCGCAAGCGCTCAGCAGACCGGCCAGCATCATCACAGGCAATTGTTTGACCACCAGGGCACTCCCTTTGCCAAGCGCCGACGTCATCAGGCCTTGGCCCGCTCTTCCAGAATTGCCACAGCTGGCAGGACCTTGCCCTCGACGAACTCGAGGAAGGCGCCACCACCGGTAGAAA  >  NC_002947/5653153‑5653450

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.