| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,239,106 | G→T | 6.4% | intergenic (‑75/‑300) | argF ← / → PP_1080 | ornithine carbamoyltransferase/molybdopterin‑binding oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,239,106 | 0 | G | T | 6.4% | 400.1 / 10.5 | 125 | intergenic (‑75/‑300) | argF/PP_1080 | ornithine carbamoyltransferase/molybdopterin‑binding oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (55/62); new base T (4/4); total (59/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.82e-01 | |||||||||||
Only 100 of 130 total aligned reads displayed.
ATGCCGTGGCGGATCACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTATTTGCTACA > NC_002947/1238958‑1239255 | aTGCCGTGGCGGATCACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGt < 1:2575479/150‑1 (MQ=255) gCCGTGGCGGATCACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTaa < 1:2294664/150‑1 (MQ=255) ccGTGGCGGATCTCCCCGAGCAATTCGTCGGTGGTGACGTCCAGCAGCGAGAGAAAGTGCCTGGCGCTCATGAGTGACTACCGTATCTGCAACGGTATGCAGGTCGACCGTATGGTTTTTTTTTGACAACGGGGGTGACCTGCGGCGTaa < 1:1131095/150‑1 (MQ=255) gTGGCGGATCACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTaa > 1:130447/1‑147 (MQ=255) gTGGCGGATCACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTaa < 2:130447/147‑1 (MQ=255) aTCACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACggg < 2:1730970/150‑1 (MQ=255) cACCCCGAGCAATTCGTCGGGGGTGAAGTCCAGCAGCGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGc < 1:164102/150‑1 (MQ=255) ccccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCCTGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACTGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCgg > 1:1320878/1‑150 (MQ=255) ccccGAGCAATTCGCACATGCTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCgg < 2:1477391/150‑1 (MQ=255) cccGCGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGa < 2:1325825/150‑1 (MQ=255) cccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGggggggg > 1:741775/1‑149 (MQ=255) cccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGa > 1:2954409/1‑150 (MQ=255) cacGAGCATTTCGTCGGTGGTGAACTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATTTGCAACGGGATGCAGGTCGACCGTATGG‑TTTCTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGa < 2:1320878/148‑1 (MQ=255) ccGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGTAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGAc < 1:1006110/150‑1 (MQ=255) cGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGc < 2:556868/145‑1 (MQ=255) cGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGc > 1:556868/1‑145 (MQ=255) cGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACg > 2:788666/1‑150 (MQ=255) cAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAAt < 2:1362688/150‑1 (MQ=255) gtcgGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGaa > 1:2449027/1‑150 (MQ=255) cgGTGCTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAg < 1:1428119/150‑1 (MQ=255) gAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACgg > 2:2549895/1‑123 (MQ=255) gAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACgg < 1:2549895/123‑1 (MQ=255) gAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAAt < 2:2963643/150‑1 (MQ=255) tCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACta > 1:648123/1‑150 (MQ=255) agcagGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATaa > 2:650509/1‑150 (MQ=255) gcagGGCGCGCAAATGCATAGCGCTCCCGAGTGACTACCTTTTCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAg < 2:664544/150‑1 (MQ=255) gcagGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAg < 2:1628350/150‑1 (MQ=255) gcagGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGGCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAg < 1:674116/150‑1 (MQ=255) gggAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTaa > 1:1806221/1‑150 (MQ=255) agagaAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATg > 1:3034061/1‑150 (MQ=255) gaAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCg > 1:3020199/1‑150 (MQ=255) aaaGTGCCTAACGCTCATGAGTGACTACCTTATATGAAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGAGTAAGTCGCACGGGACAGGCGAAATAGAGACACGCGCAATCCTATAAGTAAATGTCGc > 2:1402127/1‑150 (MQ=255) ggTGCCTAGCGGTCGGGAGTGGCTAGCGTATCTGCAACGGGATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGGAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCt < 1:1513198/149‑1 (MQ=255) gCCTCGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGaa < 1:2705461/150‑1 (MQ=255) gCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGTAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATa > 1:1055256/1‑113 (MQ=255) gCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATa < 2:1055256/113‑1 (MQ=255) gCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGaa < 2:2449027/150‑1 (MQ=255) cTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGc > 2:167883/1‑150 (MQ=255) tAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTTTTTTTGGGGTTGACCTGCGGCGTAAGCCGCTCGGGGCGGACGGAATAGGGACAGGCGCAATACTTTAATTAAATGTCGCCTGAAGcc > 2:691536/1‑150 (MQ=255) tAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGcc > 1:743939/1‑150 (MQ=255) gcgcTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCaa < 2:1797114/150‑1 (MQ=255) tCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCt > 1:2587345/1‑138 (MQ=255) tGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGa > 1:383853/1‑150 (MQ=255) gACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATAc > 1:1094849/1‑112 (MQ=255) gACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATAc < 2:1094849/112‑1 (MQ=255) aCTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAgcg < 2:3009401/150‑1 (MQ=255) aCTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGAGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAgcg > 2:2438227/1‑150 (MQ=255) cTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGaa < 1:2988211/131‑1 (MQ=255) tcccTTATCTGCAACGGGATGCAGGCCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCGGCGGCGTAAGCCGAACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAgcggc < 2:199466/148‑1 (MQ=255) tACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAg > 2:1942612/1‑100 (MQ=255) aCCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAgcggcg < 2:624080/150‑1 (MQ=255) ccTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACg > 1:1875740/1‑77 (MQ=255) cTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTTATTATTGGTGTGACCTGCGTCGTAATCTTCATTGGGCAGACGAATTAGGGAAAGGCGTAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAATGCGGCGtt > 2:2403219/1‑149 (MQ=255) cTTATCTGCAACGGCATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGc < 2:1502723/70‑1 (MQ=255) cTTATCTGCAACGGCATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGc > 1:1502723/1‑70 (MQ=255) ttATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTTACAACGGTGGTGACCTGCGGCGTAAGCCGCATGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGa > 2:763878/1‑150 (MQ=255) ttATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGa > 2:2639678/1‑150 (MQ=255) tATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCTCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAt < 2:1806221/150‑1 (MQ=255) aTCTGCAGCGGAATTCCGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGGGTAAGGGGCACGGGGCGGCAGCAATATGGAAAGGCGCACTCCTTAGCGCACCTAAGCCCTGAACCCAAGGGGGGAAAAGCGGCGTGAtt < 1:1752805/150‑1 (MQ=255) aTCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACgg < 1:918008/74‑1 (MQ=255) aTCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAtt < 1:650509/150‑1 (MQ=255) tCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGAGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttg < 1:2438227/150‑1 (MQ=255) aaCGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAg > 1:1787142/1‑119 (MQ=255) aaCGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAg < 2:1787142/119‑1 (MQ=255) tATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGGGTAAGCCGCACTGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgt < 1:2202977/150‑1 (MQ=255) aTGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgtt > 2:1345573/1‑150 (MQ=255) gCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAg < 1:2418474/80‑1 (MQ=255) aGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgttgcaa > 1:497491/1‑150 (MQ=255) gTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgttgcaaag < 2:383853/150‑1 (MQ=255) tCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgttgcaaagg < 2:3020199/150‑1 (MQ=255) gACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgttgcaaagggt < 1:2639678/150‑1 (MQ=255) gg‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTAc < 2:2355077/150‑1 (MQ=255) g‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACAATAGGGAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTAcc > 1:202182/1‑150 (MQ=255) ttttGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAggggg < 1:1738597/99‑1 (MQ=255) aCAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaa < 1:2115344/115‑1 (MQ=255) aaCGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggt < 1:2632326/117‑1 (MQ=255) aaCGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggt > 2:2632326/1‑117 (MQ=255) aaCGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTg > 2:2070357/1‑150 (MQ=255) aaCGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTg < 2:1229842/150‑1 (MQ=255) aaCGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTg > 2:2712728/1‑150 (MQ=255) aCGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGt > 2:2923368/1‑140 (MQ=255) aCGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGt < 1:2923368/140‑1 (MQ=255) gggTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGtt > 2:87197/1‑150 (MQ=255) ggTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTc < 1:2712728/150‑1 (MQ=255) ccccgtGCGGCTTACGCCGCAGGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCtt > 2:372117/6‑150 (MQ=255) gACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTa > 1:130043/1‑127 (MQ=255) cccgtGCGGCTTACGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTAc > 2:2877898/5‑128 (MQ=255) ccgtGCGGCTTACGCCGCAGGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgttgcaaa > 1:3071984/4‑115 (MQ=255) ccgtGCGGCTTACGCCGCAGGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGAttgcaaagggtgttgcaaa < 2:3071984/112‑1 (MQ=255) ccgtGCGGCTTACGCCGCAGGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCAAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTa < 1:372117/147‑1 (MQ=255) ccgtGCGGCTTACGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTa > 1:1354168/4‑126 (MQ=255) ccgtGCGGCTTACGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTa < 2:1354168/123‑1 (MQ=255) cTGCGGCGTAAGCCGCATGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTAtt < 1:763878/150‑1 (MQ=255) cTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCaa < 2:1900687/75‑1 (MQ=255) cTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCaa > 1:1900687/1‑75 (MQ=255) cTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTAtt > 1:1669162/1‑150 (MQ=255) tGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTAttt < 2:146020/150‑1 (MQ=255) gTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGaa < 1:1367917/76‑1 (MQ=255) gTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTATTTGCTACa < 2:2591400/150‑1 (MQ=255) gTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTATTTGCTACa < 2:2400483/150‑1 (MQ=255) | ATGCCGTGGCGGATCACCCCGAGCAATTCGTCGGTGGTGAAGTCCAGCAGGGAGAGAAAGTGCCTAGCGCTCATGAGTGACTACCTTATCTGCAACGGTATGCAGGTCGACCGTATGG‑TTTTTTTTGACAACGGGGGTGACCTGCGGCGTAAGCCGCACGGGGCGGACGAAATAGGGAAAGGCGCAATACTATAAGTAAATGTCGCCTGAAGCCAAGGGGGGAAAAGCGGCGTGATTGCAAAGGGTGTTGCAAAGGGTGTCTTTACCCGTTGGCCCGTGCTGTTCTTTATTTGCTACA > NC_002947/1238958‑1239255 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |