| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,316,174 | C→G | 6.6% | intergenic (+43/‑58) | PP_1148 → / → PP_mr15 | hypothetical protein/P20 ncRNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,316,174 | 0 | C | G | 6.6% | 335.8 / 12.7 | 107 | intergenic (+43/‑58) | PP_1148/PP_mr15 | hypothetical protein/P20 ncRNA |
| Reads supporting (aligned to +/- strand): ref base C (54/45); new base G (3/4); total (57/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.78e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
CCTCAAGGAAAAGCGGCTGAACGAAATGCGCAATGCTTTCGAGCAGGCCCTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCGGGCTGATGGTCG > NC_002947/1316026‑1316321 | ccTCAAGGAAAAGCGGCTGAACGAAATGCGCAATGCTTTCGAGCAGGCCCTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑Gcc < 1:364142/150‑1 (MQ=255)ccTCAAGGAAAAGCGGCTGAACGAAATGCGCAATGCTTTCGAGCAGGCCCTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑Gcc < 1:363607/150‑1 (MQ=255)ccTCAAGGAAAAGCGGCTGAACGAAATGCGCAATGCTTTCGAGCAGGCCCTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑Gcc < 1:2690012/150‑1 (MQ=255) aaGGAAAAGCGGCTGAACGAAATGCGCAATGCTTTAGAGCAGCCCCTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCgg < 2:1691986/150‑1 (MQ=255) cgaccgttaccacaccggcgataaccacgttgtcgaagaacatgctggcctccccattcgtttgccgttgtccgatgggtacacgttaaccaatgtggcggcggggaaaattgatcagtgtcaatgGTGCCCG‑GCCTCGGGCACCa < 1:1064678‑M1/20‑1 (MQ=255) cgaccgttaccacaccggcgataaccacgttgtcgaagaacatgctggcctccccattcgtttgccgttgtccgatgggtacacgttaaccaatgtggcggcggggaaaattgatcagtgtcaatgGTGCCCG‑GCCTCGGGCACCa > 2:1064678‑M1/127‑146 (MQ=255) tGAACGAAATGCGCAATGCTTTCGAGCAGGCCCTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGacac < 1:1036708/150‑1 (MQ=255) tGAACGAAATGCGCAATGCTTTCGAGCAGGCCCTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGacac < 2:1081614/150‑1 (MQ=255) gAAATGCGCAATGCTTTCGAGCAGGCCCTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATc > 2:446375/1‑150 (MQ=255) aaTGCTTTCGAGCAGGCCCTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGAt < 2:215218/140‑1 (MQ=255) aaTGCTTTCGAGCAGGCCCTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGAt > 1:215218/1‑140 (MQ=255) aaTGCTTTCGAGCAGGCCCTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCCCGGGCACCATTGACACTGATCAATTTTccc > 2:1835553/1‑150 (MQ=255) tGCTCTCGAGCAGGCCCTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTccc < 1:237755/148‑1 (MQ=255) gCTTTCGAGCAGGCCCTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCccgc < 1:2739183/150‑1 (MQ=255) gAGCAGGCCCTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCcac > 1:1731752/1‑150 (MQ=255) gCAGGCCCTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACAt > 2:2158147/1‑150 (MQ=255) cAGGCCCTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACAtt < 2:237128/150‑1 (MQ=255) cAGGCCCTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACAtt < 2:1731752/150‑1 (MQ=255) gCCCTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGt > 2:2579061/1‑150 (MQ=255) cccTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCgg > 1:1359384/1‑107 (MQ=255) cccTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCgg < 2:1359384/107‑1 (MQ=255) gcaaTTAAGAACCAGAAAGAAAAAGAAGCCCAAGGGCAAGCTTAAGAAGCGTTGAAACTTGACGCAGGTCACCCCGGCGCCCCCCTCGCGTCCCCG‑GCC‑CGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACgt < 2:2484650/147‑1 (MQ=255) ttGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGAGTGACAA‑GCCTCGATCATGGATGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTa > 1:2985647/1‑150 (MQ=255) tGAGTACCAGCAAGAAAAAAAACCCCAGGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTAc < 2:231700/150‑1 (MQ=255) tACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCAt > 1:420176/1‑150 (MQ=255) ccAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCg > 2:467109/1‑150 (MQ=255) cAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCgg < 1:155679/91‑1 (MQ=255) cAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACAt > 1:2716435/1‑129 (MQ=255) cAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACAt < 2:2716435/129‑1 (MQ=255) aGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCCTTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGa > 1:914158/1‑150 (MQ=255) aGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGa > 2:2756794/1‑150 (MQ=255) gCAAGAAAAATAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGAc > 2:1501206/1‑150 (MQ=255) gCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCAGGCAc > 2:2736780/1‑93 (MQ=255) gAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACt < 1:1975208/99‑1 (MQ=255) aaaaaGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATGGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACgg < 2:1509492/150‑1 (MQ=255) aaaaGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTACATAGGTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGc > 1:967109/1‑150 (MQ=255) cccAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAAt < 2:420176/150‑1 (MQ=255) ccAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAAc < 1:315236/138‑1 (MQ=255) ccAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGc < 1:2800058/141‑1 (MQ=255) ccAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGc > 2:2800058/1‑141 (MQ=255) ccAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATg > 1:2657214/1‑150 (MQ=255) ccAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATg > 1:1536282/1‑150 (MQ=255) cAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTAc > 2:1195259/1‑125 (MQ=255) cAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTAc < 1:1195259/125‑1 (MQ=255) cAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATgg > 1:537886/1‑150 (MQ=255) cAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATgg > 1:993223/1‑150 (MQ=255) gggCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCACCCCTGCGCCCCCCTCGCGTGCCCG‑GTCTCGCGCACCATTGACCCTGATCATTTTTCCCCCGCGCCACATTGGTTACCGTGTACCCATCGGATAACGGCAAACGAATGGGGa < 2:1040568/150‑1 (MQ=255) cAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGc > 2:882976/1‑150 (MQ=255) gCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGCGAGGCCaa > 2:2635443/1‑149 (MQ=255) ccTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAg < 2:1748752/144‑1 (MQ=255) ccTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAg > 1:1748752/1‑144 (MQ=255) tAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACaa > 2:584260/1‑124 (MQ=255) tAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACaa < 1:584260/124‑1 (MQ=255) tAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCAt > 2:2317239/1‑150 (MQ=255) aagCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTc < 1:998218/82‑1 (MQ=255) cGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGttcttc < 2:2985647/150‑1 (MQ=255) ttGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTa > 1:1878433/1‑103 (MQ=255) ttGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTa < 2:1878433/103‑1 (MQ=255) gAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACa > 2:816578/1‑150 (MQ=255) aaaCTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACaa > 2:2263806/1‑150 (MQ=255) ttGACGCAGGTCAACCCTGCGCCCCCCTCGCGTTTCCG‑GCCTCGGGCACCATTGACTCTGATCAATTTCCCCCGCCGCAACATTGGTTAACGTGTACCCATCTGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTg < 1:2635443/150‑1 (MQ=255) ttGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGGGGCCAGCATGTTCTTCGACAACGTg > 2:1638438/1‑150 (MQ=255) ttGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTg < 2:993223/150‑1 (MQ=255) aCGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGtt > 1:135193/1‑150 (MQ=255) gTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGcc > 2:1112535/1‑150 (MQ=255) tCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCTTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCg > 1:897332/1‑150 (MQ=255) tCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCg > 2:217705/1‑150 (MQ=255) cAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCgg < 2:135193/150‑1 (MQ=255) cccTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATc > 1:2826440/1‑142 (MQ=255) cccTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATc < 2:2826440/142‑1 (MQ=255) cccTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGgtgt > 1:2145400/1‑150 (MQ=255) attgatcagtgtcaatgGTGCCCGAGGC‑CGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGtt < 2:164970‑M1/106‑1 (MQ=255) attgatcagtgtcaatgGTGCCCGAGGC‑CGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGtt > 1:164970‑M1/18‑123 (MQ=255) ttgatcagtgtcaatgGTGCCCGAGGC‑CGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGttc < 1:2127425‑M1/107‑1 (MQ=255) ttgatcagtgtcaatgGTGCCCG‑AGGCCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGttc > 2:2127425‑M1/17‑123 (MQ=255) ccTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGtgtg < 1:1501206/150‑1 (MQ=255) cTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAAc < 1:1018104/100‑1 (MQ=255) cTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGc > 2:1909979/1‑142 (MQ=255) cTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGc < 1:1909979/142‑1 (MQ=255) atcagtgtcaatgGTGCACGAGGC‑CGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGttcttc > 2:787391‑M1/14‑123 (MQ=255) atcagtgtcaatgGTGCACG‑AGGCCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGttcttc < 1:787391‑M1/110‑1 (MQ=255) gcCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAAc < 2:2145400/150‑1 (MQ=255) gcCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAAc < 1:2263806/150‑1 (MQ=255) gcCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAAc < 1:446375/150‑1 (MQ=255) cccccTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACgg > 2:2008654/1‑150 (MQ=255) ccccTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGt > 2:1721493/1‑150 (MQ=255) ccTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAAt < 1:2509049/95‑1 (MQ=255) ccTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAAt > 2:2509049/1‑95 (MQ=255) ctggcgTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCGAGCAACGGCAGGTGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCgg > 1:2520765/4‑150 (MQ=255) cTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTccg < 2:897332/150‑3 (MQ=255) tCGCGTGCCCG‑GCCTCGGGCACCATTGTGGTTTGTCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGATAACGGTCggg > 1:2384448/1‑150 (MQ=255) aatgGTGCCCGAGGC‑CGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCggg < 1:1678852‑M1/146‑1 (MQ=255) cgcgTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCGGGc < 1:2317239/150‑1 (MQ=255) GTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCGGGCTGa > 1:882976‑M1/1‑150 (MQ=255) GCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCGGGCTGATg > 2:764433‑M1/1‑150 (MQ=255) CCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCGGGCTGATgg < 1:799512‑M1/150‑1 (MQ=255) CG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGt > 1:1142300‑M1/1‑51 (MQ=255) CG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGt < 2:1142300‑M1/51‑1 (MQ=255) CG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCGGGCTGATGGTc > 1:2756794‑M1/1‑150 (MQ=255) G‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCGGGCTGATGGTCg < 2:1797999‑M1/150‑1 (MQ=255) | CCTCAAGGAAAAGCGGCTGAACGAAATGCGCAATGCTTTCGAGCAGGCCCTGCCATTGAGTACCAGCAAGAAAAAGAAGCCCAAGGGCAAGCCTAAGAAGCGTTGAAACTTGACGCAGGTCAACCCTGCGCCCCCCTCGCGTGCCCG‑GCCTCGGGCACCATTGACACTGATCAATTTTCCCCGCCGCCACATTGGTTAACGTGTACCCATCGGACAACGGCAAACGAATGGGGAGGCCAGCATGTTCTTCGACAACGTGGTTATCGCCGGTGTGGTAACGGTCGGGCTGATGGTCG > NC_002947/1316026‑1316321 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |