| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,563,869 | G→T | 6.0% | intergenic (+93/+29) | PP_1372 → / ← pitB | hypothetical protein/phosphate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,563,869 | 0 | G | T | 6.0% | 376.8 / 8.5 | 117 | intergenic (+93/+29) | PP_1372/pitB | hypothetical protein/phosphate transporter |
| Reads supporting (aligned to +/- strand): ref base G (60/50); new base T (4/3); total (64/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.91e-01 | |||||||||||
Only 100 of 118 total aligned reads displayed.
GGCGGCAGTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTGCCGCCTTGCAGGC > NC_002947/1563721‑1564010 | ggcggcAGTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGa > 1:2164059/1‑150 (MQ=255) gcggcAGTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGAAAAAAAGGGTAGTCTTCCTGCGCCGGGGCATACCCTTGGTAGGACAAGCGCGCTCCGCCAAAGAAACAGGTAGCGAAGGCATAACGCCTATGAAGAAGACGCCagag > 2:743744/1‑150 (MQ=255) gcgaacgTTGCTGCGCGGGTGGATGGGGGCGTTGGTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAg > 2:2971978/7‑150 (MQ=255) ttGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCt < 2:1599697/150‑1 (MQ=255) ttGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCt > 2:1843650/1‑150 (MQ=255) gTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCttca > 2:2583261/1‑150 (MQ=255) gcgcGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCttcatt < 1:1729933/150‑1 (MQ=255) gcgcGGGTTGATGGGGTCGTTGTTAGGGAGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCAGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCttcatt > 1:1620226/1‑150 (MQ=255) cgcgGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCttcat > 2:2116676/1‑148 (MQ=255) cgcgGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCttcat < 1:2116676/148‑1 (MQ=255) gcgGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCttcattca < 2:1815123/150‑1 (MQ=255) gggTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCttcattctag < 1:2410932/150‑4 (MQ=255) gggTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTcattcatt < 2:2100813/150‑1 (MQ=255) gggTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTcattcatt < 2:2100005/150‑1 (MQ=255) ggTTGATGGGGTCGTTGTTATGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGTAAAGAGCAAGGTGGCGTAGGCATAACGGCTATGAAAACGGCGCCCGAGGGCGCCTTCATTCATTg < 2:1239197/150‑1 (MQ=255) tGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGAATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCgg > 2:312494/1‑150 (MQ=255) gATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGgt < 2:2164059/150‑1 (MQ=255) gtGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCGGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTATGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGgtg < 2:1223981/149‑1 (MQ=255) aTGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGgtg > 2:1390942/1‑150 (MQ=255) tGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTAATTCATTGCGgtgt > 1:2350481/1‑150 (MQ=255) gTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGCACAAGGTGGCGTAGGCATTACTGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACt > 1:2665778/1‑150 (MQ=255) cGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCa < 1:743744/150‑1 (MQ=255) gttAGGGGGCAAGAAAAGGTAGTCTTCCTGCCCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCa > 2:1886843/1‑150 (MQ=255) ttAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCaa > 1:2728315/1‑150 (MQ=255) gggggCAAGAAAGGGTAGTCTTCCTGCGCCGTGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGCGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATgg < 2:2405347/150‑1 (MQ=255) ggggCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGc > 1:43256/1‑150 (MQ=255) gCAAGAAAAGGTAGTCTTCCTGAGCCGCGCCATAACCTTGGTAGCACAAGCCCGCTCCGGCACAAAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGACGCCCGGGGGCGCCTTCATTAATTGCGGTGTCACTCAGCCAATgagttt > 1:663105/1‑145 (MQ=255) cAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTg > 2:465676/1‑150 (MQ=255) aaGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTgg > 2:1284998/1‑150 (MQ=255) aGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGgt > 2:363585/1‑127 (MQ=255) aGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGgt < 1:363585/127‑1 (MQ=255) gAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCACTGGCtttcaac < 2:43256/150‑5 (MQ=255) aaaGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTACGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACgc > 1:220747/1‑150 (MQ=255) gTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGGACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCGGCCAATGGCTTTGGACgccagc < 2:291374/150‑1 (MQ=255) gTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAAt < 2:1508995/131‑1 (MQ=255) gTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAAt > 1:1508995/1‑131 (MQ=255) ttCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAAc > 1:3013224/1‑150 (MQ=255) ccTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAg < 2:2728315/150‑1 (MQ=255) cTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAgg > 1:985105/1‑150 (MQ=255) cTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAgg > 2:3063893/1‑150 (MQ=255) tGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAggc > 2:1321767/1‑150 (MQ=255) cgcgccATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCttt > 2:364521/1‑125 (MQ=255) cgcgccATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCttt < 1:364521/125‑1 (MQ=255) cgcgccATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGAATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAggccggcc < 1:312494/150‑1 (MQ=255) gccATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGgccgcc > 2:1933631/1‑150 (MQ=255) gccATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGgccgcc > 1:2782604/1‑150 (MQ=255) aTACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCttcatt > 1:1133256/1‑90 (MQ=255) aTACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCttcatt < 2:1133256/90‑1 (MQ=255) aTACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAgg > 2:1769625/1‑150 (MQ=255) ccTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCa > 2:1086474/1‑150 (MQ=255) ccTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCa > 1:167047/1‑150 (MQ=255) ccTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCa > 1:2078792/1‑150 (MQ=255) cTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCAt > 1:1401413/1‑150 (MQ=255) cTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCAt > 2:1269327/1‑150 (MQ=255) ttGGTAGCACAGGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATc > 2:1338882/1‑150 (MQ=255) ggTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGa > 2:1099505/1‑150 (MQ=255) gtaacacaAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGag < 1:1534068/146‑1 (MQ=255) gTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCgg < 2:2374142/89‑1 (MQ=255) gTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCgg > 1:2374142/1‑89 (MQ=255) aGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGaggc < 1:1099505/150‑1 (MQ=255) gCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGaggca > 1:1360445/1‑150 (MQ=255) cacaAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAggc > 1:1859378/1‑126 (MQ=255) cacaAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGaggcag < 2:813567/150‑1 (MQ=255) cacaAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGaggcag < 1:1321767/150‑1 (MQ=255) acaAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCTCGGGCGCCttt > 1:2652011/1‑72 (MQ=39) aaGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACa < 2:351845/120‑1 (MQ=255) aaGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGaggca > 2:2126365/1‑146 (MQ=255) aaGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGaggca < 1:2126365/146‑1 (MQ=255) gCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGcaggcagg < 2:2451482/150‑1 (MQ=255) cccGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAggg > 2:1815006/1‑150 (MQ=255) cTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAg < 2:167047/150‑1 (MQ=255) tCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAgg < 1:1755973/150‑1 (MQ=255) cGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGaggc > 1:1364393/1‑135 (MQ=255) cGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGAc > 1:3031888/1‑150 (MQ=255) gCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCTCGGGCGCCttt > 1:3046675/1‑58 (MQ=37) gCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCTCGGGCGCCttt < 2:3046675/59‑2 (MQ=37) gCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGAccc > 2:1915102/1‑150 (MQ=255) aaaGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCAt < 1:3063893/150‑1 (MQ=255) aGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATg < 2:2938983/149‑1 (MQ=255) aaCAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACANGCCGGCNGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCca < 1:1886843/150‑1 (MQ=255) aaCAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCca < 2:1620226/150‑1 (MQ=255) aaCAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCACCTGCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCca > 1:2858004/1‑150 (MQ=255) ggTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGgt < 1:643293/60‑1 (MQ=255) ggTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGgt > 2:643293/1‑60 (MQ=255) ggTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTc > 1:1759249/1‑132 (MQ=255) ggTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTc < 2:1759249/132‑1 (MQ=255) gTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGtt > 2:1645786/1‑150 (MQ=255) gTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGtt > 2:2552581/1‑150 (MQ=255) ggCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTc < 1:1843650/150‑1 (MQ=255) gCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACa > 1:1186391/1‑87 (MQ=255) aTAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTcaca > 2:1015877/1‑150 (MQ=255) aTAACGGCTATGAAAAAGGCGCCCGAGGGCGACTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTcaca > 2:1889189/1‑150 (MQ=255) cGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTgc > 1:2394330/1‑150 (MQ=255) tATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTgccgcc < 2:2784652/150‑1 (MQ=255) aatgaaGGCGCCCTCGGGCGCCTT‑TTTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCAt < 1:1929668/113‑1 (MQ=38) aatgaaGGCGCCCTCGGGCGCCTT‑TTTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCAt > 2:1929668/5‑117 (MQ=38) aaaGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTGCCGCCTTGCAg > 2:2399899/1‑150 (MQ=255) aGGCGCCCTCGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTGCCGCCTTGCAGGc > 1:2710784/1‑150 (MQ=255) aGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTGCCGCCTTGCAGGc < 1:2399899/150‑1 (MQ=255) ggCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGt < 2:1921144/102‑1 (MQ=255) | GGCGGCAGTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTGCCGCCTTGCAGGC > NC_002947/1563721‑1564010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |