Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 3,255,886 | C→T | 8.8% | intergenic (‑106/+30) | PP_2852 ← / ← PP_2853 | sulfatase domain‑containing protein/hypothetical protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 3,255,886 | 0 | C | T | 8.8% | 283.4 / 11.3 | 99 | intergenic (‑106/+30) | PP_2852/PP_2853 | sulfatase domain‑containing protein/hypothetical protein |
Reads supporting (aligned to +/- strand): ref base C (44/46); new base T (4/5); total (48/51) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 104 total aligned reads displayed.
CAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGAAGGTCAGGCCAATAT > NC_002947/3255744‑3256034 | cAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGca < 2:2433873/150‑1 (MQ=255) aaGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGcac > 1:2156720/1‑150 (MQ=255) ttGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCg > 1:2223379/1‑150 (MQ=255) ttGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCg > 1:528847/1‑150 (MQ=255) ttGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCg > 2:732338/1‑150 (MQ=255) ttGGGTGGTCGGACAGGTTCTTCAAAACCAATTCCTTTTGTCCATGAAATCTTCATGCATCTGTGCTTGATGA‑ACCACATCTCGTATGCCGTCTTCTGCTAGTTACAAGGCTTGTAACCAAAGCCGGGCCTGTGCGCACGGGCCCGGctt > 1:1466399/1‑148 (MQ=255) tGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGa < 1:2558929/150‑1 (MQ=255) gggTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCTGTGCGAACGGGCCCGGctttg < 2:1466399/150‑5 (MQ=255) gggTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGAt < 2:305392/150‑1 (MQ=255) ggtggtCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGACGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATg < 2:3048947/150‑1 (MQ=255) ggACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTa > 2:680744/1‑150 (MQ=255) ggACAGGTTCTTCACAAAAACTTCCCTTTTGCAATTAAATCGTCCTGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGACGGCGGCCAGTTACACGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGACGGCAACTa < 2:1635694/150‑1 (MQ=255) gACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGTATTTGTGTGTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCATTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTAt > 1:2687599/1‑150 (MQ=255) aCAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGccc < 1:983669/119‑1 (MQ=255) aGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAg > 1:1095350/1‑150 (MQ=255) gTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGaa < 1:2419394/150‑1 (MQ=255) gTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGaa > 2:412097/1‑150 (MQ=255) ttcttcACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCg > 2:2757328/1‑115 (MQ=255) ttcttcACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCg < 1:2757328/115‑1 (MQ=255) acaAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGTCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGtaataa > 1:2819843/1‑150 (MQ=255) acaAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGtaataa < 1:2913105/150‑1 (MQ=255) acaAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGtaataa > 2:2913105/1‑150 (MQ=255) caAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAg > 1:844179/1‑150 (MQ=255) caAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAg < 2:2593362/150‑1 (MQ=255) caAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAg > 2:2087937/1‑150 (MQ=255) aaaCTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGa < 1:2197435/150‑1 (MQ=255) aaCTTCCCTTTTGTCATTAAATCGTCATGAATATGTCTTTGGTCGTATCACGCCGGGGCAG‑GGAAGGCGGCAAATCGGAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGaa < 1:1454132/150‑1 (MQ=255) ttCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAAttt > 1:2978524/1‑150 (MQ=255) cccTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCAAGGGCAG‑TGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTCCa > 2:686525/1‑150 (MQ=255) cTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACCAGGCTAGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAgg < 1:1737059/150‑1 (MQ=255) cTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAgg < 2:844179/150‑1 (MQ=255) gCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTgaa > 2:1769533/1‑150 (MQ=255) cATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTgaaag > 2:2775048/1‑150 (MQ=255) aTTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAg > 2:2972390/1‑131 (MQ=255) aTTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAg < 1:2972390/131‑1 (MQ=255) aaaTCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTACCCAAAGCCGGGCCCGTTCGCACAGGCCCCGCCGATGGCAACTATCAGGAGTAATAAGGGAATTTCAGGCTGTAAGaaaa < 2:913155/150‑1 (MQ=255) aaaTCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGaaaa < 1:486716/150‑1 (MQ=255) aTCGTCATGCATCTGTGATTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGt > 2:1809755/1‑150 (MQ=255) tCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGTCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTc < 2:2819843/150‑1 (MQ=255) tCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAg > 1:2217998/1‑89 (MQ=255) tCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAg < 2:2217998/89‑1 (MQ=255) cATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGt < 1:1653497/150‑1 (MQ=255) cATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGt < 1:2775048/150‑1 (MQ=255) tGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGc > 1:478001/1‑150 (MQ=255) aTCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGaaaa > 2:757985/1‑138 (MQ=255) aTCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGaaaa < 1:757985/138‑1 (MQ=255) gCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGt < 2:1095350/150‑1 (MQ=255) cTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCTGTGCGAACGGGCCCGGctttg < 2:2565273/87‑5 (MQ=25) cTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCTGTGCGAACGGGCCCGGctttg > 1:2565273/1‑83 (MQ=25) gatgatATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCTGTGCGAACGGGCCCGGct < 1:1071158/81‑2 (MQ=37) gatgatATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGGGTCATCGGTCAGa > 1:313343/1‑150 (MQ=255) gatgatATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTc < 2:2693229/147‑1 (MQ=255) gatgatATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTc > 1:2693229/1‑147 (MQ=255) gatgatATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGa > 2:361385/1‑150 (MQ=255) gatgatATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGa < 1:732338/150‑1 (MQ=255) atgatATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGa > 2:2582113/1‑108 (MQ=255) atgatATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGAc < 1:680744/150‑1 (MQ=255) tgatATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTCGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCGGAAAGAAAAGTCAGGTGCGTCATCGGTCAGAcc > 2:1489373/1‑150 (MQ=255) gatATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCAAATGGCAAATATCAGAAGTAAGAAGCGAATTCCAGAGCGAAAGAAAAGGCAGCTGCGTCATCGGTCAGACCa > 2:2491109/1‑150 (MQ=255) atCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATg < 2:478001/150‑1 (MQ=255) aGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGAc < 2:2323341/150‑1 (MQ=255) gCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGtaataa > 2:1523237/1‑94 (MQ=255) gCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGtaataa < 1:1523237/94‑1 (MQ=255) gCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAg < 1:450003/150‑1 (MQ=255) gCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAg < 1:1809755/150‑1 (MQ=255) ggAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGaaaa > 2:1232540/1‑107 (MQ=255) ggAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGaaaa < 1:1232540/107‑1 (MQ=255) gAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATAAGAAGAAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGa > 1:372864/1‑150 (MQ=255) aaGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGAt < 2:528847/150‑1 (MQ=255) aGGCGGCCAGTAACAAGGCGTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATg < 2:2184995/150‑1 (MQ=255) ggcCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCaa > 1:1246703/1‑126 (MQ=255) ggcCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCaa < 2:1246703/126‑1 (MQ=255) gTTACAAGCCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATc > 1:462216/1‑110 (MQ=255) gTTACAAGCCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATc < 2:462216/110‑1 (MQ=255) aCAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCTATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCg > 1:2376937/1‑150 (MQ=255) aCAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCg < 1:1769533/150‑1 (MQ=255) cAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCTATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCgg < 2:2376937/150‑1 (MQ=255) aaGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTg > 1:1502324/1‑127 (MQ=255) aaGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTg < 2:1502324/127‑1 (MQ=255) aaGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGt > 2:848039/1‑150 (MQ=255) aaGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGt > 2:848010/1‑150 (MQ=255) ggCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTgg > 2:1213245/1‑150 (MQ=255) gCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATTGCAACTATCAGAAGGAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGGTGGGCACGATGGTCAGGTTGTCGGTggc > 2:2892127/1‑150 (MQ=255) gCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTggc > 1:664968/1‑150 (MQ=255) ttGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTggcgg < 2:2223379/150‑1 (MQ=255) tAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAgg > 1:2565950/1‑134 (MQ=255) tAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAgg < 2:2565950/134‑1 (MQ=255) aCCAAAGCCGGGCCTGTTCGCACAGGCCCGGCCGATGGAAAATATCCCAGGTATTGGCCAAACCACACGGTTAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGAAg < 1:361385/150‑1 (MQ=255) ccAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGaa < 2:801134/148‑1 (MQ=255) ccAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGaa > 1:801134/1‑148 (MQ=255) cAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTc < 2:330178/135‑1 (MQ=255) cAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTc > 1:330178/1‑135 (MQ=255) tcggCCGGGCCTGTGCGAACGGGCCCGGCTGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCg > 2:1715278/4‑135 (MQ=255) tcggCCGGGCCTGTGCGAACGGGCCCGGCTGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCg < 1:1715278/132‑1 (MQ=255) aaGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCa > 1:39755/1‑96 (MQ=255) aaGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCa < 2:39755/96‑1 (MQ=255) cGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGAAGGTCAGGcc < 1:1877069/150‑1 (MQ=255) ccGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGAAg > 2:230923/1‑137 (MQ=255) ccGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGAAg < 1:230923/137‑1 (MQ=255) ccGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGAAGGTCAGGCCAatat > 1:1715991/1‑150 (MQ=255) | CAAGCCGGGTGCTTGGGTGGTCGGACAGGTTCTTCACAAAAACTTCCCTTTTGCCATTAAATCGTCATGCATCTGTGCTTGATGATATCAGGCCAGGGCAG‑GGAAGGCGGCCAGTTACAAGGCTTGTAACCAAAGCCGGGCCCGTTCGCACAGGCCCGGCCGATGGCAACTATCAGAAGTAATAAGGGAATTTCAGGCTGAAAGAAAAGTCAGGTGCGTCATCGGTCAGACCAATGGACAGGTTGGGCACGATGGTCAGGTTGTCGGTGGCGGCGAAGGTCAGGCCAATAT > NC_002947/3255744‑3256034 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |