| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,294,391 | G→A | 5.9% | G1211E (GGG→GAG) | PP_2893 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,294,391 | 0 | G | A | 5.9% | 333.5 / 5.7 | 113 | G1211E (GGG→GAG) | PP_2893 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (54/52); new base A (3/4); total (57/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 117 total aligned reads displayed.
AGGTTCTGGCAACAGCACCAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCGGGACGATCAGGTTGGT > NC_002947/3294242‑3294540 | gggTTCTGGCACCAGAACCAGCGTGGGCGCCAGCGGTAACATCACCGAGGAGCTGAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTNCGTTAGAAGTTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTgg < 1:2837503/149‑1 (MQ=255) ttCTGGCAACAGCACCAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCt > 1:1142276/1‑150 (MQ=255) tCTGGCAACAGCACCAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTg < 1:2017295/150‑1 (MQ=255) tCTGGCAACAGCACCAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGAGCtt > 1:1809405/1‑149 (MQ=255) cTGGCAACAGCACCAGCGTGGTCGCATGCTGTATCATCACCGAGAGGTTCAGCCTTCGTTACGGGGTGGGCGTGTTCGATCCGGCCAACACGATCGCGTTGCGTTACAAGCTGTGCAAAACGGTCTAC‑CTCGAGGCCGCCAGTGGGCTgg < 2:1084135/150‑1 (MQ=255) tGGCAACAGCACCAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGc > 2:2611808/1‑150 (MQ=255) tGGCAACAGCACCAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGc > 1:1306629/1‑150 (MQ=255) ggCAACAGCACCAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCa > 2:731827/1‑150 (MQ=255) ggCAACAGCACCAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCa > 1:2611064/1‑150 (MQ=255) gCAACAGCACCAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCaa < 2:2098965/150‑1 (MQ=255) aGCACCAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCa < 2:1235268/150‑1 (MQ=255) aGCACCAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCa < 1:2661730/150‑1 (MQ=255) cAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGa > 2:269297/1‑150 (MQ=255) aGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGAc < 1:2611808/150‑1 (MQ=255) gTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTCGGCGTGTTCTAAGCCGCAAACACTATCGCGTTGCCGTACAAGCTGAGCCAAGAGCTCTAC‑CTCGAGGCCCCCAGTGGGATGGCTAGGTCACTGGACAtcctc > 2:400440/1‑150 (MQ=255) atctccAGCGGTAACATCCACTAGAAGCTGAGCCGTCGTTACGGGGTGGGCGTGTTCGGACCGGCCAACACGATCGCGTTGCGTTACAAGCGGAGCAAGAAGGTCTAC‑CGCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACAtcttc < 1:274875/146‑1 (MQ=255) tCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGc > 2:2165293/1‑126 (MQ=255) tCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGc < 1:2165293/126‑1 (MQ=255) taGCGGTAACATCACCGAGAAGCGCATCCTTCGTTACGGGGGGGTGGTGTTCGAACCGGCGAACACGATCGCGTTGCTTGACAAGCTGAGCAACAACACCTAC‑CTGGCGGCCGCCCGTGGGCTGGCAAGCTCACTGTACAtcttcgatat > 2:274875/2‑145 (MQ=255) gCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAgc > 2:1774122/1‑150 (MQ=255) aaCATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGAc < 1:731827/150‑1 (MQ=255) cATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACtt < 2:2728183/150‑1 (MQ=255) cACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTa < 2:1167530/150‑1 (MQ=255) cGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGc > 1:2876969/1‑150 (MQ=255) agaAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGccc < 2:2691895/150‑1 (MQ=255) agaAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGccc < 1:703434/150‑1 (MQ=255) agaAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGAGCTTGCCAGCCCACTggc < 1:102837/121‑2 (MQ=255) agaAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGAGCTTGCCAGCCCACTggc > 2:102837/1‑120 (MQ=255) cTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAgc > 2:1704561/1‑130 (MQ=255) cTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAgc < 1:1704561/130‑1 (MQ=255) tCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCg > 1:1432310/1‑150 (MQ=255) tCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCg > 1:675031/1‑150 (MQ=255) cAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGt < 1:177630/150‑1 (MQ=255) ccTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTggc > 1:524797/1‑150 (MQ=255) tCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTggcggc < 2:228801/150‑1 (MQ=255) ttACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCAt < 2:1130970/150‑1 (MQ=255) ggggTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGt > 2:1750893/1‑137 (MQ=255) gggTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCACCGTGGCCGCCATCAacg > 2:306146/1‑150 (MQ=255) ggTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAacgg > 1:459898/1‑150 (MQ=255) gggCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAacggacg < 1:383888/150‑1 (MQ=255) gCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGt > 1:569695/1‑150 (MQ=255) cGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTg > 2:1594304/1‑150 (MQ=255) cGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTg < 2:524797/150‑1 (MQ=255) gtTCGAACCTGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGgcc > 1:281725/1‑150 (MQ=255) gtTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGgcc < 1:2880048/150‑1 (MQ=255) ttCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCGAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGgccg > 2:2753363/1‑150 (MQ=255) ttCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTa > 1:3000311/1‑98 (MQ=255) ttCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTa < 2:3000311/98‑1 (MQ=255) tCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCa > 1:262449/1‑120 (MQ=255) tCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCa < 2:262449/120‑1 (MQ=255) gAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCt > 1:2782407/1‑150 (MQ=255) aaCCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAg > 1:343627/1‑110 (MQ=255) aaCCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAg < 2:343627/110‑1 (MQ=255) aaCCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTc < 2:2611064/150‑1 (MQ=255) cGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGAt < 2:2876969/150‑1 (MQ=255) cGGCCAACACGATCGCGTTGAGTTCCGAGATGTACACGAGGGCCTACACTC‑TTTCCGCAATTGAGCTTGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGAGGCCATCAACGGACTGTGGCCGCCTCGAt < 2:675031/150‑1 (MQ=255) cAACACGATCGCGTTGCGTTACAAGCTGAGCAAGGGAGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAAc > 1:2548306/1‑150 (MQ=255) cAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAAc > 1:2180961/1‑150 (MQ=255) aaCACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACt > 2:36524/1‑150 (MQ=255) cacGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGAt < 2:1388634/143‑1 (MQ=255) acGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGt < 1:269297/150‑1 (MQ=255) acGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGt < 2:1306629/150‑1 (MQ=255) gATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTgg < 2:1994507/71‑1 (MQ=255) gATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACAtcttct > 2:1449868/1‑80 (MQ=255) gATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACAtcttct < 1:1449868/80‑1 (MQ=255) cgttgcgttACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTc < 1:738259/150‑1 (MQ=255) gttgcgttACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACAtcttc < 1:1540817/73‑1 (MQ=255) gttgcgttACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACAtcttc > 2:1540817/1‑73 (MQ=255) tgcgttACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑ggg > 1:1113674/1‑150 (MQ=255) cgttACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTg < 2:2302389/150‑1 (MQ=255) ttACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTg < 1:444990/138‑1 (MQ=255) ttACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAg < 2:2782407/150‑1 (MQ=255) ttACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAg > 1:2273140/1‑150 (MQ=255) ttACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCCAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGCTg > 2:444990/1‑138 (MQ=255) ttACAAGCTGAGCAAGAAGGTCTAA‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAg > 1:1494391/1‑150 (MQ=255) gaGCTGAGCAAGAAGGTCTAC‑CTAGAGGCCGAAAGTGGCCTGGCAAGCTTAGTGGCCATGTTCTACAAGCGGGCCTTCTAGGCCCGAAGCGTGGCGGCCATCAACGGACGGTGGCGGCCTCGATGAACTTATGGATGTC‑GGGTGAGGGCg > 2:481599/2‑150 (MQ=255) aaGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTg > 2:1286145/1‑113 (MQ=255) aaGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTg < 1:1286145/113‑1 (MQ=255) gCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGAAATCTTTTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCTCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCggt < 1:506372/150‑1 (MQ=255) cTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCggtg > 2:1899062/1‑150 (MQ=255) cAAGAAGGTCTAC‑GTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCggtggggtg > 2:1442806/1‑150 (MQ=255) cAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCggtggggtg < 2:281725/150‑1 (MQ=255) aagaagGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGAc > 2:1803001/1‑66 (MQ=255) aagaagGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGAc < 1:1803001/66‑1 (MQ=255) agaagGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCGCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCATCGATGAACTCGGTGGGGTC‑GGGTGAGGGCGGTGGggtggt > 2:1779456/1‑150 (MQ=255) tAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCTCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTa > 2:1806648/1‑150 (MQ=255) tAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGGGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGCGGGGGGGTGGCGCGTa > 1:843410/1‑150 (MQ=255) aC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTAc > 2:1183902/1‑150 (MQ=255) c‑cTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTa < 1:1114968/60‑1 (MQ=255) c‑cTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTa > 2:1114968/1‑60 (MQ=255) cTCGAGGCCGCCAGTGGGCTGGCAAGCCGGCGGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCg > 1:2093883/1‑150 (MQ=255) tCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGGCATCTTCTAAAAGCGCGATATCCAAGCCGGCAGCGTTGCAGCCATCAACGGACGGTGGCCTCCTCGATGAACTCGTTGGTGTC‑GGGCGAGGGCGGTGGGGGGGTGGCGCCTACCgg > 2:518284/1‑150 (MQ=255) aGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCGGGAc < 1:1774122/150‑1 (MQ=255) aGGCCGCAAGTGGCCTGGCAACCTCACTGGACCTCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGCCGGTGGCCGACTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCGGGAc < 2:1432310/150‑1 (MQ=255) gccAGTGGGCTGGCAAGCTCACTGGACATCGTCTACAAGCGCGACGTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCGGGACGATCa > 1:1842170/1‑150 (MQ=255) cAGTGGGCTGGCAAGCTCACTGGACCTCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTTCAGGGACGATCAgg < 2:114594/150‑1 (MQ=255) tGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCCAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGACCTCGTCAGCGTCTGGGTG‑TTGCGGTGGGGTGGTGGCGCGTACCGGGACGATCAGGTTg < 1:1596216/150‑1 (MQ=255) ggCTGGCAAGCTCACTGGACATCTTCTACAAGCTCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCGGGACGATCAGGTTGgt < 1:1806648/150‑1 (MQ=255) ggCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGt < 2:2575417/95‑1 (MQ=255) ggCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGt > 1:2575417/1‑95 (MQ=255) | AGGTTCTGGCAACAGCACCAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTAC‑CTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCGGGACGATCAGGTTGGT > NC_002947/3294242‑3294540 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |