| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,294,402 | T→C | 5.3% | S1215P (TCA→CCA) | PP_2893 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,294,402 | 0 | T | C | 5.3% | 318.2 / 4.1 | 109 | S1215P (TCA→CCA) | PP_2893 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (48/53); new base C (3/3); total (53/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.37e-01 | |||||||||||
Only 100 of 110 total aligned reads displayed.
AGCACCAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCGGGACGATCAGGTTGGTGTATTCCTCGA > NC_002947/3294255‑3294551 | aGCACCAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCa < 2:1235268/150‑1 (MQ=255)aGCACCAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCa < 1:2661730/150‑1 (MQ=255) cAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGa > 2:269297/1‑150 (MQ=255) cAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGAGCTTGCCAGCCCACTggc < 2:1809405/150‑2 (MQ=255) cAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGAGCTTGCCAGCCCACTg < 1:2917786/148‑1 (MQ=255) aGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGAc < 1:2611808/150‑1 (MQ=255) gCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACa < 2:1142276/150‑1 (MQ=255) gTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTCGGCGTGTTCTAAGCCGCAAACACTATCGCGTTGCCGTACAAGCTGAGCCAAGAGCTCTACCTCGAGGCCCCCAGTGGGATGGCTAGGTCACTGGACAtcctc > 2:400440/1‑150 (MQ=255) atctccAGCGGTAACATCCACTAGAAGCTGAGCCGTCGTTACGGGGTGGGCGTGTTCGGACCGGCCAACACGATCGCGTTGCGTTACAAGCGGAGCAAGAAGGTCTACCGCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACAtcttc < 1:274875/146‑1 (MQ=255) taGCGGTAACATCACCGAGAAGCGCATCCTTCGTTACGGGGGGGTGGTGTTCGAACCGGCGAACACGATCGCGTTGCTTGACAAGCTGAGCAACAACACCTACCTGGCGGCCGCCCGTGGGCTGGCAAGCTCACTGTACAtcttcgatat > 2:274875/2‑145 (MQ=255) aaCATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGAc < 1:731827/150‑1 (MQ=255) cATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACtt < 2:2728183/150‑1 (MQ=255) cACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTa < 2:1167530/150‑1 (MQ=255) cGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGc > 1:2876969/1‑150 (MQ=255) agaAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGccc < 1:703434/150‑1 (MQ=255) agaAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGccc < 2:2691895/150‑1 (MQ=255) agaAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGAGCTTGCCAGCCCACTggc < 1:102837/121‑2 (MQ=255) cTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAgc > 2:1704561/1‑130 (MQ=255) cTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAgc < 1:1704561/130‑1 (MQ=255) tCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCg > 1:1432310/1‑150 (MQ=255) tCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCg > 1:675031/1‑150 (MQ=255) cAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGt < 1:177630/150‑1 (MQ=255) ccTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTggc > 1:524797/1‑150 (MQ=255) cTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTggcg < 1:75136/150‑1 (MQ=255) tCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTggcggc < 2:228801/150‑1 (MQ=255) ttACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCAt < 2:1130970/150‑1 (MQ=255) ggggTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGt < 1:1750893/137‑1 (MQ=255) ggggTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGt > 2:1750893/1‑137 (MQ=255) gggTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCACCGTGGCCGCCATCAacg > 2:306146/1‑150 (MQ=255) gggCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAacggacg < 1:383888/150‑1 (MQ=255) gCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGt > 1:569695/1‑150 (MQ=255) cGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTg < 2:524797/150‑1 (MQ=255) cGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTg > 2:1594304/1‑150 (MQ=255) cGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCCAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTg > 2:1596216/1‑150 (MQ=255) gtTCGAACCTGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGgcc > 1:281725/1‑150 (MQ=255) gtTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGgcc < 1:2880048/150‑1 (MQ=255) ttCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCGAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGgccg > 2:2753363/1‑150 (MQ=255) ttCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTa > 1:3000311/1‑98 (MQ=255) ttCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTa < 2:3000311/98‑1 (MQ=255) tCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCa > 1:262449/1‑120 (MQ=255) tCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCa < 2:262449/120‑1 (MQ=255) gAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCt > 1:2782407/1‑150 (MQ=255) aaCCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAg < 2:343627/110‑1 (MQ=255) aaCCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAg > 1:343627/1‑110 (MQ=255) cGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGAt < 2:2876969/150‑1 (MQ=255) cAACACGATCGCGTTGCGTTACAAGCTGAGCAAGGGAGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAAc > 1:2548306/1‑150 (MQ=255) cAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAAc > 1:2180961/1‑150 (MQ=255) aaCACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACt > 2:36524/1‑150 (MQ=255) aaCACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCGCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGCTGGCCGCCTCGATGAACt > 2:2417077/1‑150 (MQ=255) cacGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGAt > 1:1388634/1‑143 (MQ=255) cacGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGAt < 2:1388634/143‑1 (MQ=255) acGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGt < 1:269297/150‑1 (MQ=255) acGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGt < 2:1306629/150‑1 (MQ=255) gATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTgg < 2:1994507/71‑1 (MQ=255) gATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACAtcttct < 1:1449868/80‑1 (MQ=255) gATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACAtcttct > 2:1449868/1‑80 (MQ=255) cgttgcgttACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTc < 1:738259/150‑1 (MQ=255) gttgcgttACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACAtcttc > 2:1540817/1‑73 (MQ=255) gttgcgttACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACAtcttc < 1:1540817/73‑1 (MQ=255) tgcgttACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑ggg > 1:1113674/1‑150 (MQ=255) cgttACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTg < 2:2302389/150‑1 (MQ=255) ttACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTg < 1:444990/138‑1 (MQ=255) ttACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTc < 2:272642/143‑1 (MQ=255) ttACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAg > 1:2273140/1‑150 (MQ=255) ttACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAg < 2:2782407/150‑1 (MQ=255) ttACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCCAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGCTg > 2:444990/1‑138 (MQ=255) ttACAAGCTGAGCAAGAAGGTCTAACTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAg > 1:1494391/1‑150 (MQ=255) gaGCTGAGCAAGAAGGTCTACCTAGAGGCCGAAAGTGGCCTGGCAAGCTTAGTGGCCATGTTCTACAAGCGGGCCTTCTAGGCCCGAAGCGTGGCGGCCATCAACGGACGGTGGCGGCCTCGATGAACTTATGGATGTC‑GGGTGAGGGCg > 2:481599/2‑150 (MQ=255) aaGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTg > 2:1286145/1‑113 (MQ=255) aaGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTg < 1:1286145/113‑1 (MQ=255) gCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGAAATCTTTTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCTCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCggt < 1:506372/150‑1 (MQ=255) cTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCggtg > 2:1899062/1‑150 (MQ=255) cAAGAAGGTCTACGTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCggtggggtg > 2:1442806/1‑150 (MQ=255) cAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCggtggggtg < 2:281725/150‑1 (MQ=255) aagaagGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGAc > 2:1803001/1‑66 (MQ=255) aagaagGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGAc < 1:1803001/66‑1 (MQ=255) agaagGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCGCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCATCGATGAACTCGGTGGGGTC‑GGGTGAGGGCGGTGGggtggt > 2:1779456/1‑150 (MQ=255) cTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGt > 1:2551041/1‑150 (MQ=255) tACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCTCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTa > 2:1806648/1‑150 (MQ=255) tACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGGGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGCGGGGGGGTGGCGCGTa > 1:843410/1‑150 (MQ=255) aCCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTAc > 2:1183902/1‑150 (MQ=255) ccTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTa < 1:1114968/60‑1 (MQ=255) ccTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTa > 2:1114968/1‑60 (MQ=255) cTCGAGGCCGCCAGTGGGCTGGCAAGCCGGCGGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCg > 1:2093883/1‑150 (MQ=255) tCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGGCATCTTCTAAAAGCGCGATATCCAAGCCGGCAGCGTTGCAGCCATCAACGGACGGTGGCCTCCTCGATGAACTCGTTGGTGTC‑GGGCGAGGGCGGTGGGGGGGTGGCGCCTACCgg > 2:518284/1‑150 (MQ=255) aGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCGGGAc < 1:1774122/150‑1 (MQ=255) aGGCCGCAAGTGGCCTGGCAACCTCACTGGACCTCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGCCGGTGGCCGACTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCGGGAc < 2:1432310/150‑1 (MQ=255) ccgccAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGTGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCGGGACGAt < 1:518284/150‑1 (MQ=255) gccAGTGGGCTGGCAAGCTCACTGGACATCGTCTACAAGCGCGACGTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCGGGACGATCa > 1:1842170/1‑150 (MQ=255) cAGTGGGCTGGCAAGCTCACTGGACCTCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTTCAGGGACGATCAgg < 2:114594/150‑1 (MQ=255) tGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCGGGACGATCAGGTTg < 2:459898/150‑1 (MQ=255) tGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCCAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGACCTCGTCAGCGTCTGGGTG‑TTGCGGTGGGGTGGTGGCGCGTACCGGGACGATCAGGTTg < 1:1596216/150‑1 (MQ=255) ggCTGGCAAGCTCACTGGACATCTTCTACAAGCTCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCGGGACGATCAGGTTGgt < 1:1806648/150‑1 (MQ=255) ggCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGt > 1:2575417/1‑95 (MQ=255) ggCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGt < 2:2575417/95‑1 (MQ=255) tGGCAAGCTCACTGGACATCTTCTACAAGAGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCGGGACGATCAGGTTg > 1:1729338/1‑145 (MQ=255) tGGCAAGCTCACTGGACATCTTCTACAAGAGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCGGGACGATCAGGTTg < 2:1729338/145‑1 (MQ=255) cAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCGGGACGATCAGGTTGGTGTATTc < 1:1899062/150‑1 (MQ=255) aGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCGGGACGATCAGGTTGGTGTATTCCt > 1:134431/1‑150 (MQ=255) tCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCGGGACGATCAGGTTGGTGTATTCCTCGa < 2:1113674/150‑1 (MQ=255) | AGCACCAGCGTGGTCGCCAGCGGTAACATCACCGAGAAGCTCAGCCTTCGTTACGGGGTGGGCGTGTTCGAACCGGCCAACACGATCGCGTTGCGTTACAAGCTGAGCAAGAAGGTCTACCTCGAGGCCGCCAGTGGGCTGGCAAGCTCACTGGACATCTTCTACAAGCGCGACTTCTAGGCCCGCAGCGTGGCGGCCATCAACGGACGGTGGCCGCCTCGATGAACTCGTTGGTGTC‑GGGTGAGGGCGGTGGGGTGGTGGCGCGTACCGGGACGATCAGGTTGGTGTATTCCTCGA > NC_002947/3294255‑3294551 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |