| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,554,503 | G→C | 6.0% | E26Q (GAG→CAG) | PP_3139 → | group 1 family glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,554,503 | 0 | G | C | 6.0% | 491.9 / 18.3 | 151 | E26Q (GAG→CAG) | PP_3139 | group 1 family glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base G (78/64); new base C (5/4); total (83/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.91e-01 | |||||||||||
Only 100 of 159 total aligned reads displayed.
GCCCGTAGTCGACAGCCTGAAGTGAAGGTTGCCAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGCTCAAGGGGTTGTTGGCACCGACGTGGC > NC_002947/3554354‑3554644 | gCCCGTAGTCGACAGCCTGAAGTGAAGGTTGCCAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTgg < 2:2562754/150‑1 (MQ=255) cccGTAGTCGACAGCCTGAAGTGAAGGTTGCCAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGa > 2:1830075/1‑150 (MQ=255) ccGTAGTCGACAGCCTGAAGTGAAGGTTGCCAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAg < 2:2440815/150‑1 (MQ=255) gTAGTCGACAGCCTGAAGTGAAGGTTGCCAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAgcg > 1:711299/1‑150 (MQ=255) gTAGTCGACAGCCTGAAGTGAAGGTTGCCAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAgcg > 1:1479368/1‑150 (MQ=255) tCGACAGCCTGAAGTGAAGGTTGCCAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCaa < 1:1140644/150‑1 (MQ=255) gACAGCCTGAAGTGAAGGTTGCCAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGATTGCGCGCCGAGTCAGTACTCGAAAGTCAGCCACCGTTTCGTACGCCACGCAATTTTGGCGCTGGAGCGCCAAgg > 1:1594848/1‑150 (MQ=255) aCAGCCTGAAGTGAAGGTTGCCAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAggg < 2:1396416/150‑1 (MQ=255) aCAGCCTGAAGTGAAGGTTGCCAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAggg > 1:2099191/1‑150 (MQ=255) ccTGAAGTGAAGGTTGCCAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTg < 1:1488684/150‑1 (MQ=255) ccTGAAGTGAAGGTTGCCAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTg > 1:1879180/1‑150 (MQ=255) tgaagtgaagGTTGCCAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAg > 2:2841558/1‑150 (MQ=255) aagtgaagGTTGCCAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCTCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGt < 2:275986/150‑1 (MQ=255) agtgaagGTTGCCAGGGGAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTg < 2:711299/150‑1 (MQ=255) gtgaagGTTGCCAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGc > 2:2486313/1‑150 (MQ=255) gtgaagGTTGCCAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCAATTTTTTATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGc < 1:561189/150‑1 (MQ=255) gTTGCCAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGta > 1:457280/1‑150 (MQ=255) gCCATGGAAGGTTTGTCAACAATGGGATTTGGATTTGAATTCGTATGCGCATTGTTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAg < 2:603335/150‑1 (MQ=255) cAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGcc > 2:2084897/1‑150 (MQ=255) cAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGcc > 2:477011/1‑150 (MQ=255) aGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCaa > 1:461780/1‑140 (MQ=255) gggAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAg > 1:2549411/1‑125 (MQ=255) ggAAGGTTGGTCATAAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTg > 1:2409792/1‑150 (MQ=255) gTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCgtgg < 1:2878937/150‑1 (MQ=255) ggTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCgtgggtg < 2:457280/150‑1 (MQ=255) gTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAATGGGTTGAGGTGCAACGTATAGCCCTGCgtgggtgg > 2:1660957/1‑150 (MQ=255) gTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCgtgggtgg < 1:477011/150‑1 (MQ=255) tcaAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATTCTGGCGCAGGGGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACg < 1:2236585/150‑1 (MQ=255) gCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAgg < 2:1592535/116‑1 (MQ=255) gCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGa > 2:1455324/1‑150 (MQ=255) gTTTGGATCTGGATTCGGATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTg > 1:2375520/1‑150 (MQ=255) ttGGATCTGGATTCGTATGCGCATTTCTTACTTCATGAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGa < 2:525310/108‑1 (MQ=255) aTCTGGATTCGTATGCGCATTGCTTACTTCGTCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGAt > 2:1487567/1‑150 (MQ=255) aTCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGAt > 2:1523849/1‑150 (MQ=255) tCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGt < 2:167254/142‑1 (MQ=255) tCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGt > 1:167254/1‑142 (MQ=255) tGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGcc > 1:1582361/1‑150 (MQ=255) ggATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGtt > 2:1693132/1‑98 (MQ=255) ttCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAgg > 2:404563/1‑150 (MQ=255) tGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCaa > 1:977434/1‑150 (MQ=255) tGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCaa < 2:977434/150‑1 (MQ=255) gcgcATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAg < 1:404563/150‑1 (MQ=255) tGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACg < 1:1157755/150‑1 (MQ=255) gCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACgg < 1:2921872/150‑1 (MQ=255) ttACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACgggg > 1:1297999/1‑150 (MQ=255) ttACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACgggg > 2:3004613/1‑150 (MQ=255) ttACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACgggg < 2:2409792/150‑1 (MQ=255) ttACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACgggg < 1:1347767/150‑1 (MQ=255) aCTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGt < 1:305139/118‑1 (MQ=255) aCTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCa > 2:1136614/1‑150 (MQ=255) ttCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAg > 2:2829278/1‑150 (MQ=255) ttCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAg > 1:2563444/1‑150 (MQ=255) catcaATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTTGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGAc < 1:163431/150‑1 (MQ=255) atcaatcaGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCaa < 2:2762307/133‑1 (MQ=255) atcaatcaGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCaa > 1:2762307/1‑133 (MQ=255) tcaatcaGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGAccc > 2:361544/1‑150 (MQ=255) atcaGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCgtgg < 2:449198/94‑1 (MQ=255) atcaGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGa > 1:695046/1‑100 (MQ=255) atcaGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCt > 1:1654483/1‑150 (MQ=255) aGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGCCGCAAGCGAACGGGGCAAAAACCGCGACg > 2:17506/1‑150 (MQ=255) gTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCgtgggtg < 1:207347/93‑1 (MQ=255) gTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCgtgggtg > 2:207347/1‑93 (MQ=255) ccGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGAt < 2:475203/108‑1 (MQ=255) ccGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTg > 2:2965731/1‑150 (MQ=255) gAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGAccc > 1:2797533/1‑137 (MQ=255) tCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTg > 2:1660691/1‑150 (MQ=255) tCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTCCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTg > 2:1996791/1‑150 (MQ=255) aGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTggg < 2:2563444/150‑1 (MQ=255) aGCCACAGTTTCATCCGTCGCCAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTggg < 2:1582361/150‑1 (MQ=255) gCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGc > 1:1202738/1‑150 (MQ=255) ccACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGCt > 1:2138450/1‑150 (MQ=255) ccACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGCt > 1:143019/1‑150 (MQ=255) cacaGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCt > 2:2393798/1‑68 (MQ=255) cacaGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCt < 1:2393798/68‑1 (MQ=255) cacaGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGCTc < 1:2084897/150‑1 (MQ=255) acaGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCaa > 1:1562494/1‑108 (MQ=255) aGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGCTCAAg < 2:1878841/150‑1 (MQ=255) aGTTTCATCCGTCGCGAAAGACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGCTCAAg > 2:3053038/1‑150 (MQ=255) gTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGCTCAAgg < 1:1830075/150‑1 (MQ=255) tCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGt < 1:1770437/134‑1 (MQ=255) tCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGCTCAAGGGgttgt > 1:1708984/1‑150 (MQ=255) tCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGCTCAAGGGgttgt < 1:920955/150‑1 (MQ=255) ccGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAGGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGCTCAAGGGgttgtt < 1:1660957/150‑1 (MQ=255) tCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTTCAAGGTGTGCTCAAGGGTGTGTTGGc > 2:2193275/1‑150 (MQ=255) tCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGc < 2:2825018/134‑1 (MQ=255) tCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGCTCAAGGGGTTGTTGGc > 1:1087851/1‑150 (MQ=255) tCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACATATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGCTCAAGGGgtt > 1:487454/1‑144 (MQ=255) aaaTACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGCTCAAGGGGTTGTTGGCACCGa > 2:49030/1‑150 (MQ=255) cccttGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGCTCAAGGGGTTGTTGGCACCGACg > 1:2716467/5‑150 (MQ=255) cccttGGCGCTCCAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCaa < 1:431776/84‑1 (MQ=255) tACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGCTCAAGGGGTTGTTGGCACCGACGt < 2:2138450/150‑1 (MQ=255) ccttGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGa > 2:1228779/4‑102 (MQ=255) ccttGGCGCTCCAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTAGGGCAAGGTggg > 1:2462925/4‑125 (MQ=255) cttGGCGCTCCAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCaa > 2:2135066/3‑99 (MQ=255) cttGGCGCTCCAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCaa < 1:2135066/97‑1 (MQ=255) cttGGCGCTCCAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGCTCAAGGGGTTGTTGGCACCGACGTg > 1:986765/3‑150 (MQ=255) ggAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTAc > 2:238573/1‑100 (MQ=255) ggAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGCTCAAGGGGTTGTTGGCACCGACGTGGc < 1:915970/143‑1 (MQ=255) ggAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGCTCAAGGGGTTGTTGGCACCGACGTGGc > 2:915970/1‑143 (MQ=255) gAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGc < 1:1998444/115‑1 (MQ=255) | GCCCGTAGTCGACAGCCTGAAGTGAAGGTTGCCAGGGAAGGTTGGTCATCAAGCGGGTTTGGATCTGGATTCGTATGCGCATTGCTTACTTCATCAATCAGTACCCGAAAGTCAGCCACAGTTTCATCCGTCGCGAAATACTGGCGCTGGAGCGCCAAGGGGTTGAGGTGCAACGTATAGCCCTGCGTGGGTGGGACGCCGAAGTGCAGGATGCCGAGGACGCAAGCGAACGGGGCAAGACCCGCTACGTATTGCAAGGTGGGCTCAAGGGGTTGTTGGCACCGACGTGGC > NC_002947/3554354‑3554644 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |