| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,624,187 | G→C | 5.3% | intergenic (‑92/+81) | PP_3194 ← / ← PP_3195 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,624,187 | 0 | G | C | 5.3% | 351.2 / 6.8 | 114 | intergenic (‑92/+81) | PP_3194/PP_3195 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (58/48); new base C (2/4); total (62/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.85e-01 | |||||||||||
Only 100 of 116 total aligned reads displayed.
GGGTGTGCAGGCCAGTGCCGTCGAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAGTCGGCGATGTAGTGCCCGGCATTGATGCTGT > NC_002947/3624038‑3624335 | gggTGTGCAGGCCAGTGCCGTCGAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATgg < 1:2140638/150‑1 (MQ=255) gtgtGCAGGCCAGTGCCGTCGAACAGGGTGGAGCAGTGCAGGTTCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCa < 1:1591512/150‑1 (MQ=255) gCAGGCCAGTGCCGTCGAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGa > 2:217531/1‑150 (MQ=255) ggCCAGTGCCGTCGAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGGATCggtgg > 1:757763/1‑146 (MQ=255) ggCCAGTGCCGTCGAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATAc > 2:175926/1‑150 (MQ=255) ggCCAGTGCCGTCGAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATAc < 1:625008/150‑1 (MQ=255) gCCAGTGCCGTCGAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGTGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCATGTGCTATTGATGGCCAGGTATCGATGGCATCGATAcc > 1:2174565/1‑150 (MQ=255) gCCAGTGCCGTCGAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATAcc > 2:1317922/1‑150 (MQ=255) ccAGTGCCGTCGAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTTGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGCCATCGATACC‑t < 1:347297/150‑1 (MQ=255) cAGTGCCGTCGAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATc > 2:2098187/1‑142 (MQ=255) cAGTGCCGTCGAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑Tg < 1:1608091/150‑1 (MQ=255) cAGTGCCGTCGAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGCCATCGATACC‑Tg < 1:488700/150‑1 (MQ=255) aGTGCCGTCGAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGCCATCGATACC‑Tgg < 1:2683826/150‑1 (MQ=255) cGTCGAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGAGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGctc > 2:2873507/1‑150 (MQ=255) gAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTg < 2:2776033/150‑1 (MQ=255) gAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTg > 1:2619061/1‑150 (MQ=255) aaCAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCATAAGCAGATGCAAGTACTGTCCAGATAGCGAGGGCATGGAAAGC‑AGGCGATCTATgg > 2:29527/1‑150 (MQ=255) aaCAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTgg > 2:1056554/1‑150 (MQ=255) ggTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAg > 1:1028584/1‑150 (MQ=255) gTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGa > 1:2084195/1‑150 (MQ=255) gAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAAc < 2:2153185/150‑1 (MQ=255) gCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACga < 1:230651/150‑1 (MQ=255) gtgcaggtgcagGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCa > 1:351236/1‑115 (MQ=255) gtgcaggtgcagGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCa < 2:351236/115‑1 (MQ=255) caggtacaggGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACgg < 1:270196/150‑1 (MQ=255) ttGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATAGATACG‑AGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCgccgcc > 1:967051/1‑150 (MQ=255) aGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGcc > 1:175053/1‑150 (MQ=255) aGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGACGCCCAAGcc > 1:823323/1‑150 (MQ=255) ctctctCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAg < 2:2084195/150‑1 (MQ=255) ctcgcgcATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAg < 2:1501604/144‑1 (MQ=255) tctctcATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAgg < 1:1056554/150‑1 (MQ=255) tctcATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGgc < 1:2412186/133‑1 (MQ=255) tctcATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGgc > 2:2412186/1‑133 (MQ=255) tcATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTCTTGATGGCCAGGTAT‑GGTTTCGGCGCGGCCATGGGTTTCGCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCg > 1:2228372/1‑150 (MQ=255) tcATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCg > 1:318792/1‑150 (MQ=255) tcATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGCCATCGATAc < 2:1183566/89‑1 (MQ=255) tcATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGCCATCGATAc > 1:1183566/1‑89 (MQ=255) cATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCgg < 2:318792/150‑1 (MQ=255) aTCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCaa > 2:2597958/1‑138 (MQ=255) aTCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCaa < 1:2597958/138‑1 (MQ=255) tCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCGATTGGcgccg < 1:2564426/132‑1 (MQ=255) tCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCGATTGGcgccg > 2:2564426/1‑132 (MQ=255) ttGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAgc > 1:1270822/1‑150 (MQ=255) ggggTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCATATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAgcgc < 1:176906/149‑1 (MQ=255) ggggTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAgcgc > 2:176906/1‑149 (MQ=255) tgCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAAc < 2:1803150/97‑1 (MQ=255) tgCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAAc > 1:1803150/1‑97 (MQ=255) tgCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAgg < 2:2581112/150‑1 (MQ=255) gCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATc > 2:1566229/1‑68 (MQ=255) gCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATc < 1:1566229/68‑1 (MQ=255) gCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCGATTGGcgccgttctc < 1:1094971/124‑6 (MQ=255) gCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCGATTGGcgccgttctc > 2:1094971/1‑119 (MQ=255) gCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCACGCCAGGGCCGGCAGCGCCGATCAGGc > 2:1565962/1‑150 (MQ=255) gCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGcc > 2:248424/1‑133 (MQ=255) gCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGAt < 1:1427565/145‑1 (MQ=255) gCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGAt > 2:1427565/1‑145 (MQ=255) gCAAGGCTAGGCAGTGGCGAGAGCAAAGCACAAGCAGAAGTTATTGATTGCCAGGTAGCGATGTCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGc > 2:1572293/1‑150 (MQ=255) gctaggctGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGGTGGCGTCGCTACC‑TGGCGCTCTAAGCCGCAGAAACGCGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCgtgt < 1:217531/150‑1 (MQ=255) taggctGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGaa > 2:437448/1‑94 (MQ=255) taggctGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTgg > 1:2748947/1‑150 (MQ=255) aggctGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGaaa < 1:1020421/87‑1 (MQ=255) ggctGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGgcc > 2:3056394/1‑150 (MQ=255) ctGTGGCGACTGCCCGGCACAAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGgccgc < 2:2174565/150‑1 (MQ=255) gtgGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCa > 2:518607/1‑150 (MQ=255) tgGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGTCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCaa < 2:1770239/150‑1 (MQ=255) tgGCGACTGCCCGGCACCAGCAGATGCTATTGACGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCaa < 1:322991/150‑1 (MQ=255) gCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACgg < 1:841934/88‑1 (MQ=255) gCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACgg > 2:841934/1‑88 (MQ=255) gCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGc > 2:1114684/1‑134 (MQ=255) gCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGc < 1:1114684/134‑1 (MQ=255) gCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAgg < 2:1240974/150‑1 (MQ=255) gCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAgg < 1:655562/150‑1 (MQ=255) gACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGt > 1:404674/1‑150 (MQ=255) gACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGt > 2:2294324/1‑150 (MQ=255) ccGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCggg > 2:1061331/1‑149 (MQ=255) ggCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGc > 1:1963706/1‑106 (MQ=255) ggCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGc < 2:1963706/106‑1 (MQ=255) aCCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATcc > 1:638866/1‑150 (MQ=255) ccAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCa < 1:175926/150‑1 (MQ=255) cagcagATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAg > 2:2810016/1‑150 (MQ=255) cagcagATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAg > 1:1380370/1‑150 (MQ=255) aTGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAGTCGGCg > 1:86075/1‑150 (MQ=255) tGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAGTCGGCGa > 2:612664/1‑150 (MQ=255) gCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAGTCGGCGAt > 2:168011/1‑150 (MQ=255) cTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGgc > 2:859846/1‑75 (MQ=255) cTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAGTCGGCGATg > 1:419879/1‑150 (MQ=255) cTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGCCTCAGAAACGAGAACGGCGCCAATCGgc < 1:859846/75‑1 (MQ=255) tATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGtgtg < 1:1324870/115‑1 (MQ=255) aTTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAGTCGGCGATGTa < 2:2619061/150‑1 (MQ=255) aTTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAGTCGGCGATGTa < 1:612664/150‑1 (MQ=255) aTTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAGTCGGCGATGTa < 2:419879/150‑1 (MQ=255) aTGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAGTCGGCGATGTAgcgc < 2:823323/150‑1 (MQ=255) gCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAGTCGGCGATGTAGTGCCCg > 2:919117/1‑150 (MQ=255) gTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAGTCGGCGATGTAGTGCCCGGCAtt < 2:638866/150‑1 (MQ=255) gTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAGTCGGCGATGTAGTGCCCGGCAtt > 1:579533/1‑150 (MQ=255) gTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAGTCGGCGATGTAGTGCCCGGCAtt < 1:2873507/150‑1 (MQ=255) tATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAGTCGGCGATGTAGTGCCCGGCATTg > 2:1789924/1‑150 (MQ=255) aTGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAGTCGGCGATGTAGTGCCCGGCATTGATGCt > 2:2123292/1‑150 (MQ=255) aTGCCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAGTCGGCGATGTAGTGCCCGGCATTGATGCt > 2:833300/1‑150 (MQ=255) ggCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAGTCGGCGATGTAGTGCCCGGCATTGATGCTGt < 2:757763/150‑1 (MQ=255) | GGGTGTGCAGGCCAGTGCCGTCGAACAGGGTGGAGCAGTGCAGGTGCAGGGCACTCATTGGTGAGCTCTCTCATCTTGGGGGTGGTGCAAGGCTAGGCTGTGGCGACTGCCCGGCACCAGCAGATGCTATTGATGGCCAGGTATCGATGGCATCGATACC‑TGGCGCTCTCTGGCGCAGAAACGAGAACGGCGCCAATCGGCGCCGCCCAAGCCAGGGCCGGCAGCGCCGATCAGGCCGTGTGGCCGCCAAGGGTTTCGGCGATCCAGTCGGCGATGTAGTGCCCGGCATTGATGCTGT > NC_002947/3624038‑3624335 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |