| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,050,054 | C→A | 6.7% | L15M (CTG→ATG) ‡ | oprB‑III → | carbohydrate‑selective porin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,050,054 | 0 | C | A | 6.7% | 290.9 / 6.4 | 90 | L15M (CTG→ATG) ‡ | oprB‑III | carbohydrate‑selective porin |
| Reads supporting (aligned to +/- strand): ref base C (51/33); new base A (3/3); total (54/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.66e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
CCCGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGCCCACGGT > NC_002947/4049939‑4050203 | cccGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtct > 2:875934/1‑150 (MQ=255) ccGCTCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCAACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtctc > 1:1404800/1‑150 (MQ=255) ccGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCAGGGCCAGcagc > 1:1702521/1‑124 (MQ=255) ccGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCAGGGCCAGcagc < 2:1702521/126‑3 (MQ=255) cGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCa > 1:2820449/1‑150 (MQ=255) gCTCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCAt > 1:2772289/1‑150 (MQ=255) gCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCa < 1:2568636/149‑1 (MQ=255) gCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCa > 2:2568636/1‑149 (MQ=255) gCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCAt > 1:718553/1‑150 (MQ=255) gCTCCGGCAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGGCCTTGCCAGCGACGATCTCAt > 2:1584000/1‑150 (MQ=255) cTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATg > 2:2399163/1‑150 (MQ=255) tCCTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGa > 1:2556128/1‑150 (MQ=255) cTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGcc > 1:1825203/1‑126 (MQ=255) cTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCa > 2:1286490/1‑145 (MQ=255) cTACAGGGGCCTTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCa < 1:1286490/145‑1 (MQ=255) tACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGAccc < 2:2820449/150‑1 (MQ=255) aCAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCg > 2:2870335/1‑150 (MQ=255) aCAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCg > 2:2416463/1‑150 (MQ=255) cAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCgc < 1:2416463/150‑1 (MQ=255) cAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCgc > 1:2081798/1‑150 (MQ=255) ggCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCgcagc > 1:76080/1‑150 (MQ=255) gccttGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGctggccctggc > 1:2188541/5‑105 (MQ=255) gccttGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGctggccctggc < 2:2188541/101‑1 (MQ=255) cTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCAGGGCCAGcagc < 1:2534947/109‑3 (MQ=255) cTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCAGGGCCAGcagc > 2:2534947/1‑107 (MQ=255) gTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGa > 1:35415/1‑150 (MQ=255) ggAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCg > 1:170512/1‑150 (MQ=255) gAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCgg > 1:1354750/1‑150 (MQ=255) aGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGt > 2:60645/1‑150 (MQ=255) gCGGGCTTGCCCGCGAATGCCCCTCAAAGCCAACACGAGATTCTGCAATGACATCCGCATTTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCGCCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTg > 1:1598312/1‑150 (MQ=255) gCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTg > 1:2316322/1‑150 (MQ=255) cGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGa < 2:2772289/150‑1 (MQ=255) gggCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGAc > 1:1377484/1‑150 (MQ=255) ggCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGcgac > 2:265886/1‑116 (MQ=255) ggCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGcgac < 1:265886/116‑1 (MQ=255) gCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGcac < 2:2863285/96‑1 (MQ=255) gCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGcac > 1:2863285/1‑96 (MQ=255) cTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGcacc > 1:497958/1‑96 (MQ=255) cTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGcacc < 2:497958/96‑1 (MQ=255) ttGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTg > 1:1625795/1‑99 (MQ=255) ttGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTg < 2:1625795/99‑1 (MQ=255) ttGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTggg < 1:875934/150‑1 (MQ=255) ttGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGAAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTggg > 2:1292620/1‑150 (MQ=255) tGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTgggg < 2:76080/150‑1 (MQ=255) tGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTgcgc < 2:2081798/150‑1 (MQ=255) gCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGAAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGcc < 1:1292620/150‑1 (MQ=255) cccTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGccc > 2:1631042/1‑88 (MQ=255) cccTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGccc < 1:1631042/88‑1 (MQ=255) cccTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGAc < 2:1344706/132‑1 (MQ=255) cccTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGAc > 1:1344706/1‑132 (MQ=255) cccTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGggcg < 2:1531695/139‑1 (MQ=255) cccTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGggcg > 1:1531695/1‑139 (MQ=255) ccTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGc < 2:163555/77‑1 (MQ=255) ccTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGc > 1:163555/1‑77 (MQ=255) ccTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCa < 2:1374603/105‑1 (MQ=255) ccTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCa > 1:1374603/1‑105 (MQ=255) aaCCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGcc < 1:2019090/82‑1 (MQ=255) aaCCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGcc > 2:2019090/1‑82 (MQ=255) aaCCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtctc < 1:2848199/94‑1 (MQ=255) aaCCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtctc > 2:2848199/1‑94 (MQ=255) cccGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGaagaag > 2:247738/1‑150 (MQ=255) cccGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGaagaag > 2:1068419/1‑150 (MQ=255) ccGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGcc > 2:902271/1‑134 (MQ=255) ccGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGcc < 1:902271/134‑1 (MQ=255) cGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCACGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGAc > 1:810175/1‑150 (MQ=255) aTTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCg < 2:1377484/150‑1 (MQ=255) tCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGc > 2:2582675/1‑147 (MQ=255) tCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGc < 1:2582675/147‑1 (MQ=255) gTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAg < 2:718553/150‑1 (MQ=255) taagtccATCCGCAATTCGCATCACCCCCACCCTGCTCCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGa < 2:2119630/145‑1 (MQ=255) tAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGa > 2:2295128/1‑150 (MQ=255) tAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGa > 1:558051/1‑150 (MQ=255) aTCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGCTCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCgg > 1:574594/1‑150 (MQ=255) tCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGc > 2:946072/1‑150 (MQ=255) tCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGc > 1:1806600/1‑150 (MQ=255) cGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGa < 1:1584000/150‑1 (MQ=255) cGCAATTCGCATCACCCCCACCCTGCTGCTGGCCAGGGCCa > 1:1017228/1‑41 (MQ=255) cGCAATTCGCATCACCCCCACCCTGCTGCTGGCCAGGGCCa < 2:1017228/41‑1 (MQ=255) gCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCg < 2:1557929/133‑1 (MQ=255) gCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCg > 1:1557929/1‑133 (MQ=255) aaTTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCAt > 1:1297297/1‑69 (MQ=255) aaTTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCAt < 2:1297297/69‑1 (MQ=255) aaTTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTa < 1:247738/150‑1 (MQ=255) gCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTACGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCg > 1:1722024/1‑150 (MQ=255) cATCACCCCCACCCTGCCGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCgg < 1:1657070/150‑1 (MQ=255) ctcccacccACCCTGCTCCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCACGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGt < 1:2760197/144‑1 (MQ=255) ccACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATCACACGCAGCACCCTAACCGGTGTCTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCg > 1:1909201/1‑150 (MQ=255) gccgctgctgGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTa > 1:107041/4‑150 (MQ=255) ccTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGGCCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTa > 1:2857903/1‑150 (MQ=255) gctgctgGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACaa < 2:2556128/150‑1 (MQ=255) tgctgGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTggg < 1:2838518/75‑1 (MQ=255) tgctgGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTggg > 2:2838518/1‑75 (MQ=255) ctggccagggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTg < 1:1910748/67‑1 (MQ=255) ggccctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTa > 1:977697/1‑123 (MQ=255) ccctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGCCCACg > 1:2692885/1‑150 (MQ=255) cctggccCGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAAc < 1:1454085/86‑1 (MQ=255) cctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGa < 2:2639934/41‑1 (MQ=255) cctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGa > 1:2639934/1‑41 (MQ=255) cctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAAc > 2:1454085/1‑86 (MQ=255) ctggccAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGCCCACGGt > 1:1547435/1‑150 (MQ=255) | CCCGCTCCTACAAGGCCCCTGTAGGAGCGGGCTTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGTAATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCCTGACCGGTGACTGGGGCGGCCTGCGCCATCAACTCGAAGAAGACGGCGTCAAGATCACCGGCGACTACAGCGGTGAAACCGCCTACAACGCCCACGGT > NC_002947/4049939‑4050203 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |