| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,103,397 | T→A | 5.0% | intergenic (‑108/‑109) | PP_3611 ← / → PP_3612 | hypothetical protein/TonB‑dependent receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,103,397 | 0 | T | A | 5.0% | 346.6 / 6.9 | 113 | intergenic (‑108/‑109) | PP_3611/PP_3612 | hypothetical protein/TonB‑dependent receptor |
| Reads supporting (aligned to +/- strand): ref base T (56/51); new base A (2/4); total (58/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.84e-01 | |||||||||||
Only 100 of 116 total aligned reads displayed.
GCAAGGGTTACAGCACGAGCGAGAGTACGAATGGGGTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATGGCAAAAAGGTCTGTTGCCCCAGCATCCATTTCCATGC > NC_002947/4103249‑4103545 | gCAAGGGTTACAGCACGAGCGAGAGTACGAATGGGGTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCAtt > 2:1596682/1‑150 (MQ=255) cAAGGGTTACAGCACGAGCGAGAGTACGAATGGGGTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCAttt > 1:490065/1‑150 (MQ=255) ttACAGCACGAGCGAGAGTACGAATGGGGTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGc > 2:1047898/1‑150 (MQ=255) ttACAGCACGAGCGAGAGTACGAATGGGGTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGc > 2:1609285/1‑150 (MQ=255) ttACAGCACGAGCGAGAGTACGAATGGGGTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCAAACG‑TTAGGTTCTTGAGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGc < 2:417356/150‑1 (MQ=255) aCAGCACGAGCGAGAGTACGACTGGGGTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGAAATGCGTCGcca < 2:1575854/150‑2 (MQ=255) aCAGCACGAGCGAGAGTACGAATGGGGTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGAAATGCGTCGcca < 2:1579522/150‑2 (MQ=255) gCACGAGCGAGAGTACGAATGGGGTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGaaa < 1:2323932/150‑1 (MQ=255) gCACGAGCGAGAGTACGAATGGGGTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGAAATGCGTCGccagcc < 1:598495/150‑5 (MQ=255) cACGAGCGAGAGTACGAATGGGGTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAAt > 2:2026774/1‑150 (MQ=255) cgagcgagAGTACGAATGGGGTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGTTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCa < 2:800063/150‑1 (MQ=255) gcgagAGTACGAATGGGGTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTg < 1:1609285/150‑1 (MQ=255) gagaGTACGAATGGGGTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTCtt > 2:1355693/1‑150 (MQ=255) gagTACGAATGGGGTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCATGCAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTtat > 1:70430/1‑150 (MQ=255) gagTACGAATGGGGTTCATAGGCGCGCAAGCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTtat > 1:1619043/1‑150 (MQ=255) gAATGGTGTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGAAATGCGTCGcc < 1:2932109/130‑1 (MQ=255) gAATGGGGTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTaa < 1:2719383/150‑1 (MQ=255) gAATGGGGTTCATAGGCGTGCTTCCCTGTGATCAAGGCCTAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTaa > 1:848087/1‑150 (MQ=255) gTTCATAGGCGTGCTTCCCTGTGATCCAGTCAGAATATGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAAt > 1:593444/1‑150 (MQ=255) gTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAAt > 2:370866/1‑150 (MQ=255) gTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAAt > 2:1311588/1‑150 (MQ=255) gTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAAt > 1:1708436/1‑150 (MQ=255) aTAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCtt > 1:5174/1‑150 (MQ=255) tAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGCCAAGCAT‑AGCCATTACCGGAAGCCTTGCCGGCCCTCTCCACTGGTTACTCATTTCGGCGCCGAAATCACTGTTATAGCTAATACGAATTCttt < 1:1596682/150‑1 (MQ=255) ggCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTac > 1:975269/1‑150 (MQ=255) gCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCCTTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTaca > 1:132983/1‑150 (MQ=255) tGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACtt > 1:1633586/1‑150 (MQ=255) cTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGc < 1:693468/150‑1 (MQ=255) ttCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTGGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCt > 1:1816230/1‑150 (MQ=255) ttCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCt > 1:1557592/1‑150 (MQ=255) tctccgggATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCTTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCtt < 2:70430/143‑1 (MQ=255) tCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGGCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATACTTTACACTTGCtt < 2:42125/150‑1 (MQ=255) cTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTAc > 2:1918660/1‑150 (MQ=255) tgtgATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACa > 1:1529509/1‑150 (MQ=255) tgATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTtat > 2:2950573/1‑116 (MQ=255) tgATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTtat < 1:2950573/116‑1 (MQ=255) tgATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACAGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTCCGTGGCCGAACTCACACTTAGAGCCAATACGAATCCTTTACACTTGCTTTACAtt > 2:523890/1‑150 (MQ=255) gaccAAGTCCGAATAGTCGCGTGAAAGGGTCACGCGCTGACAAGCAT‑AGCCATCACCGGCCGTCTTGCCGGGCCTGTCGGCGGGCGACGCATTTCGTCCCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACAttt < 1:846040/147‑1 (MQ=255) cAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCa < 2:2762413/150‑1 (MQ=255) aaGTCCGTAGAGGCGCGTCAAATGCTCTCGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCaa < 2:1708436/150‑1 (MQ=255) gTCCGAATAGGCCCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAAt > 2:1663262/1‑150 (MQ=255) tCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGtt < 1:103142/106‑1 (MQ=255) ccGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCa < 1:1771616/150‑1 (MQ=255) gAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAGTCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCAtt > 2:12640/1‑150 (MQ=255) aaTAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTa < 1:1663262/150‑1 (MQ=255) aaTAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTa > 2:1739026/1‑150 (MQ=255) ggCGCGTGAAAGGCTTACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTAt > 1:126981/1‑150 (MQ=255) gcgTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCg > 2:2688869/1‑150 (MQ=255) cgTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGt < 2:5174/150‑1 (MQ=255) gTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTg > 1:444568/1‑150 (MQ=255) tGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGa < 1:2026774/150‑1 (MQ=255) aaGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTc < 1:370866/150‑1 (MQ=255) aGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGATTcc > 1:2633386/1‑150 (MQ=255) gCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACAtt > 1:2231273/1‑122 (MQ=255) gCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACAtt < 2:2231273/122‑1 (MQ=255) cTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAacaaca > 2:823932/1‑150 (MQ=255) tGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGt > 1:2299882/1‑132 (MQ=255) tGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGt < 2:2299882/132‑1 (MQ=255) aCAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAag > 1:1841798/1‑150 (MQ=255) cAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAGTCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAaga < 1:12640/150‑1 (MQ=255) aaGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGc > 1:2055660/1‑100 (MQ=255) aaGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGc < 2:2055660/100‑1 (MQ=255) aaGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAagag > 1:257966/1‑150 (MQ=255) gCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGATTCCCGATAACAACAAAGAGTc < 2:2633386/150‑1 (MQ=255) gCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTc > 2:2747845/1‑150 (MQ=255) cAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCg < 2:848087/150‑1 (MQ=255) aGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGc > 1:1299741/1‑71 (MQ=255) aGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGc < 2:1299741/71‑1 (MQ=255) aGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCt < 2:1633586/150‑1 (MQ=255) ccATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGt < 2:2813741/63‑1 (MQ=255) ccATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGt > 1:2813741/1‑63 (MQ=255) aTTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTaa > 1:275158/1‑150 (MQ=255) ttACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCTTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAAt < 1:324897/150‑1 (MQ=255) tACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATg < 1:1311588/150‑1 (MQ=255) tACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATg < 1:2013614/150‑1 (MQ=255) cGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATGGCa < 1:1047898/150‑1 (MQ=255) gccTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATGGCAAAAAg < 2:1557592/150‑1 (MQ=255) gccTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATGGCAAAAAg < 1:139208/150‑1 (MQ=255) cTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGCTAACAACAAAGAGTCGCCTGTAATGGCAAAAAGGt > 1:795866/1‑150 (MQ=255) cTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATGGCAAAAAGGt > 1:1631928/1‑150 (MQ=255) cTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATGGCAAAAAGGt < 1:2688869/150‑1 (MQ=255) ttGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATGGCAAAAAGGTc > 1:2145990/1‑150 (MQ=255) tgtcGGCCCGCTCGGTTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATGGCAAAAAGGTCt < 1:234369/147‑1 (MQ=255) tGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATGGCAAAAAGGTCt < 1:1380530/150‑1 (MQ=255) ggCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATGGCAAAAAGGTCTGTTg > 2:2243219/1‑150 (MQ=255) ggCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCATATAATAGCAAAAAGGTCTGTTg < 2:132983/150‑1 (MQ=255) ccTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATGGCAAAAAGGTCTGTTGccc > 1:884615/1‑150 (MQ=255) tttcggCGACGAAATGCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATGGCAAAAAGGTCTGTTGCCCCAGCAt > 1:2146211/5‑150 (MQ=255) ggCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCa < 1:1396232/76‑1 (MQ=255) ggCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCa > 2:1396232/1‑76 (MQ=255) gCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATGGCAAAAAGGTCTGTTGCCCCAGCATCCAtt > 1:2208867/1‑150 (MQ=255) gACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTg < 1:565567/113‑1 (MQ=255) gACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTg > 2:565567/1‑113 (MQ=255) gACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATGGCGAAAAGGTCTGtt > 1:2247478/1‑133 (MQ=255) gACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATGGCGAAAAGGTCTGtt < 2:2247478/133‑1 (MQ=255) aCGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATGGCAAAAAGGTCTGTTGCCCCAGCATCCATTTcc < 2:1719029/150‑1 (MQ=255) aCGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATGGCAAAAAGGTCTGTTGCCCCAGCATCCATTTcc < 2:884615/150‑1 (MQ=255) aTTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGc < 1:2583754/105‑1 (MQ=255) aTTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGc > 2:2583754/1‑105 (MQ=255) aTTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATGGCAAAAAGGTCTGTTGCCCCAGCATCCATTTCCATGc > 2:1499116/1‑150 (MQ=255) | GCAAGGGTTACAGCACGAGCGAGAGTACGAATGGGGTTCATAGGCGTGCTTCCCTGTGATCAAGTCCGAATAGGCGCGTGAAAGGCTCACGCGCTGACAAGCAT‑AGCCATTACCGGCCGCCTTGCCGGCCCTCTCGGCTGGCGACGCATTTCGTCGCCGAAATCACTGTTATAGCTAATACGAATTCTTTACACTTGCTTTACATTTGCAAATCATTACTATTCGTGACTCCCGATAACAACAAAGAGTCGCCTGTAATGGCAAAAAGGTCTGTTGCCCCAGCATCCATTTCCATGC > NC_002947/4103249‑4103545 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |