| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,354,719 | G→A | 7.6% | T7I (ACC→ATC) noncoding (4/97 nt) |
rpsO ← PP_mr54 ← |
30S ribosomal protein S15 S15 regulatory region |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,354,719 | 0 | G | A | 7.6% | 338.9 / 9.7 | 116 | T7I (ACC→ATC) noncoding (4/97 nt) | rpsO PP_mr54 | 30S ribosomal protein S15 S15 regulatory region |
| Reads supporting (aligned to +/- strand): ref base G (59/48); new base A (3/6); total (62/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 120 total aligned reads displayed.
TTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCGACGCGGCGCAATGCGC > NC_002947/5354572‑5354868 | ttgttgATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTc > 1:121526/1‑150 (MQ=255) gttgATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGACCCCGCATGCGGGATccg < 2:1373494/150‑2 (MQ=255) tgATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAAt > 2:2358150/1‑150 (MQ=255) gATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATa > 2:1534125/1‑150 (MQ=255) aTGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAg < 2:2681471/150‑1 (MQ=255) aTGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCAGCATGAGGGGTCCAATAg < 2:2349402/150‑1 (MQ=255) tGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGGTCCCGCATGCGGGGTCCAATAgg < 2:2788145/150‑1 (MQ=255) gTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGACCCCGCATGCGGGATccgttatca < 2:2500521/150‑8 (MQ=255) tGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCa < 2:1261207/150‑1 (MQ=255) tGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCa < 1:2358150/150‑1 (MQ=255) ggTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGa < 2:2417635/150‑1 (MQ=255) gTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGAc < 2:1734810/150‑1 (MQ=255) agcagAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGTGTCCAATAGGCCAGGGACaca > 1:198177/1‑148 (MQ=255) agcagAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACaaa < 2:2562522/150‑1 (MQ=255) agcagAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACaaa > 1:1980178/1‑150 (MQ=255) agagCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATcc < 2:887103/150‑1 (MQ=255) gagCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATccc < 2:2168525/150‑1 (MQ=255) gagCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATccc > 1:2902295/1‑150 (MQ=255) agCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCt > 1:1653803/1‑150 (MQ=255) cAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGt > 2:847781/1‑150 (MQ=255) cAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGACCCCGCATGCGGGATccgtt < 1:935449/129‑4 (MQ=255) aCCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTAt > 1:1482263/1‑150 (MQ=255) cTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGa < 2:271692/135‑1 (MQ=255) cTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGa > 1:271692/1‑135 (MQ=255) cTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAACCCCTGTATta > 2:1281383/1‑150 (MQ=255) ggCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGgt < 2:2265215/150‑1 (MQ=255) ggCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGgt < 2:699695/150‑1 (MQ=255) tACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAAt < 2:108035/126‑1 (MQ=255) tACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGtgtg > 2:2761688/1‑150 (MQ=255) tACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGtgtg > 2:433552/1‑150 (MQ=255) tACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGACCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAAt > 1:108035/1‑126 (MQ=255) aCCGGTATCGCCGGCGGCTTGCTGATATTCGGCAAAGATCTGAGCTTTTTATTCAACGCTGAGAACCATCTGGCTTCTC‑CTGATAATTTATCGTGTATGCGGGGTCCAATAGGCCAGGTACAAATCCCTGTATTAATAAAAAAGGTGTGa < 2:1120753/150‑1 (MQ=255) ccGGTATCGCCGGCGGCTTGCTGATATTCAGCAACGAAACGTGGACTTAGTCCAACGCTGAGGGCCCTGTGTGGTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCATGGACAAAGCCCGGTATTAATAAAAAAGGTGTGAc > 1:534984/1‑150 (MQ=255) aTCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGc < 1:2761688/150‑1 (MQ=255) ccGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑GTGATAACGGAAACCAAATCCAGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCtgc < 2:1285367/150‑3 (MQ=255) ccGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTAc < 1:433552/150‑1 (MQ=255) ttGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGACCCCGCATGCGGGATcc < 2:3031560/89‑1 (MQ=255) ttGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGACCCCGCATGCGGGATcc > 1:3031560/1‑89 (MQ=255) cTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCAcc > 2:1308892/1‑150 (MQ=255) cTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCAcc > 2:3030222/1‑150 (MQ=255) cTGATATTCGGCAACGATCTGAGCTTTTTCTACAACGATCAGACCCATG‑CGCGTCGCACTCAGAAGAGATCGGACGAGCGTGGTGTAGGGGACGAGTGACAGATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCAcc > 2:348034/1‑150 (MQ=255) tGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCAccc > 2:1844225/1‑150 (MQ=255) tGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCAccc > 2:1158580/1‑150 (MQ=255) gATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTcc < 2:1701441/84‑1 (MQ=255) gATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTcc > 1:1701441/1‑84 (MQ=255) gATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGAc < 2:1963696/98‑1 (MQ=255) gATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATtaat < 2:1707276/114‑1 (MQ=255) gATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATtaat > 1:1707276/1‑114 (MQ=255) atTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGa > 1:2791947/1‑150 (MQ=255) gCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCg > 2:2269480/1‑150 (MQ=255) cAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGt < 2:1482263/150‑1 (MQ=255) tGAGCTTTTTCTTCAACGCTGAGGGCCGTGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCg > 1:2045250/1‑150 (MQ=255) tGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCg > 2:2444314/1‑150 (MQ=255) gAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGTATGCGGGGTCCAATAg < 2:527076/71‑1 (MQ=255) gAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGTATGCGGGGTCCAATAg > 1:527076/1‑71 (MQ=255) gAGCTTTTTCTTCAACGCTGAGGGCAATGTTGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGCggggtcagg > 1:83887/1‑145 (MQ=255) tttCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTg > 2:1730291/1‑150 (MQ=255) ttcttcAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGc < 1:1844225/150‑1 (MQ=255) tcttcAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGcc > 1:2438578/1‑150 (MQ=255) cttcAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCt < 1:1158580/150‑1 (MQ=255) ttcAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTg > 1:840013/1‑150 (MQ=255) ttcAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTg > 1:2486595/1‑150 (MQ=255) tcAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGt < 2:501904/130‑1 (MQ=255) tcAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGt > 1:501904/1‑130 (MQ=255) tcAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGa > 2:2065083/1‑150 (MQ=255) aaCGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGt > 2:2135364/1‑100 (MQ=255) aaCGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGt < 1:2135364/100‑1 (MQ=255) gAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCgg < 2:840013/150‑1 (MQ=255) cATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCgg < 1:1534125/150‑1 (MQ=255) aTGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACACTCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGt < 1:858054/150‑1 (MQ=255) gCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGt > 1:1121357/1‑82 (MQ=255) gCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGt < 2:1121357/82‑1 (MQ=255) gCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTc < 1:1308892/150‑1 (MQ=255) cTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATtaataa < 1:2407957/60‑1 (MQ=255) cTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATtaataa > 2:2407957/1‑60 (MQ=255) cTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCACAGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTccgaccga > 1:2858442/1‑150 (MQ=255) tGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCg > 1:496805/1‑135 (MQ=255) tGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCg < 2:496805/135‑1 (MQ=255) tGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGaa > 2:1554716/1‑150 (MQ=255) tGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGaa > 1:244501/1‑150 (MQ=255) tGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCCGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCg < 1:2406593/135‑1 (MQ=255) tGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGAAAAATCACTGTATGAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGaa > 1:536861/1‑150 (MQ=255) aTAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATc > 1:2084529/1‑150 (MQ=255) tAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCa < 2:2084529/150‑1 (MQ=255) aaCGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAg < 1:1730291/150‑1 (MQ=255) aCGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACCCCCACGAGGACATGATGCCGGGGGGCGTGGGAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGc > 1:1594201/1‑150 (MQ=255) ggATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGAc < 1:1602882/116‑1 (MQ=255) ggATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGAc > 2:1602882/1‑116 (MQ=255) ggATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCgg < 2:1612652/129‑1 (MQ=255) ggATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCg > 2:66018/1‑150 (MQ=255) ggATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCg > 1:2848883/1‑150 (MQ=255) ccGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTg > 2:838366/1‑91 (MQ=255) ccGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTg < 1:838366/91‑1 (MQ=255) cGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTgg < 2:231264/91‑1 (MQ=255) cGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTgg > 1:231264/1‑91 (MQ=255) cGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGc > 2:1027066/1‑105 (MQ=255) cGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGc < 1:1027066/105‑1 (MQ=255) cATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCGACgcggcg > 2:3053465/1‑150 (MQ=255) gggTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTTACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCGACGCGGCGCAATgc < 2:904234/150‑1 (MQ=255) gTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCGACGCGGCGCAATgcgc < 2:2438578/150‑1 (MQ=255) | TTGTTGATGTTGGCGGTCAGCAGAGCAACCTGCACTTCCGGGCTACCGGTATCGCCGGCGGCTTGCTGATATTCGGCAACGATCTGAGCTTTTTCTTCAACGCTGAGGGCCATGTGGCTTCTC‑CTGATAACGGATCCCGCATGCGGGGTCCAATAGGCCAGGGACAAATCCCTGTATTAATAAAAAAGGTGTGACCGTGCCTACTGACAGCCACCCTTGATGCCGTGGGGCTCGGCAACTGCCTGACCCCGCGGTTTCGGTCATTCCGACCGAATCAGCCGACGCGGCGCAATGCGC > NC_002947/5354572‑5354868 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |