New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5201627 = | 33 (0.550) | 10 (0.230) | 9/194 | 3.7 | 29.9% | intergenic (‑65/‑115) | PP_4582/PP_4583 | membrane protein/putative Peptidase |
? | NC_002947 | 5201722 = | 23 (0.530) | intergenic (‑160/‑20) | PP_4582/PP_4583 | membrane protein/putative Peptidase | |||||
Rejected: Coverage evenness skew score above cutoff. |
GCAGCCAGGCATACGGGTCGGTGGCCTGGTCGGCTTGGGCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5201808‑5201627 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAGGAA > NC_002947/5201722‑5201867 GCAGCCAGGCATACGGGTCGGTGGCCTGGTCGGCTTGGGCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGC > 2:465281/1‑150 AGCCAGGCATACGGGTCGGTGGCCTGGTCGGCTTGGGCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCACTCCAACAGCAATCGCACCGAGGTATAAGCGG < 2:1188943/150‑1 AGGCAGACGGGTCGGTGGCCTGGTCGGCTTGGGCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTT < 2:338919/150‑1 GGCATACGGGTCGGTGGCCTGGTCGGCTTGGGCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTA < 2:1330147/150‑1 GTCGGTGGCCTGGTCGGCTTGGGCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTT > 1:1200462/1‑139 GTCGGTGGCCTGGTCGGCTTGGGCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTT < 2:1200462/139‑1 CGGTGGCCTGGTCGGCTTGGGCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAG < 1:465281/150‑1 CTGGTCGGCTTGGGCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGC < 2:646103/125‑1 CTGGTCGGCTTGGGCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGC > 1:646103/1‑125 AATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGG < 1:1020239/107‑1 AATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGG > 2:1020239/1‑107 tTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGG > 1:299044/2‑67 tTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGG < 2:299044/66‑1 CCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAA > 1:257815/1‑76 CCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAA < 2:257815/76‑1 CCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCACCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCg > 1:683917/1‑149 CCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAAT < 1:1356742/72‑1 CCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAAT > 2:1356742/1‑72 GCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTT > 1:382570/1‑81 GCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTT < 2:382570/81‑1 CAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCC < 1:395122/101‑1 CAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCC > 2:395122/1‑101 AACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAG > 1:410008/1‑150 GTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGCGGTACTCGCTTACC > 2:268405/1‑150 GTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACC > 1:178303/1‑150 TTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCT > 1:346645/1‑150 CCGCGAAGAGGCCGGCACAGGTAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAG > 1:1055539/1‑150 CCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAG < 2:178303/150‑1 CCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAG > 1:1178866/1‑150 CCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCA > 1:63469/1‑85 CCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCA < 2:63469/85‑1 CGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGC > 2:910738/1‑150 GAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGA > 2:164360/1‑150 GAGGCCGGCACAGGCAACTCCAATGAAGAGACCTTCAAGGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGCCCCGTATGCCGGGCTGCAACAGCGCGACAGCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAA < 1:321402/150‑1 GCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAGGAA < 2:346645/150‑1 GCAGCCAGGCATACGGGTCGGTGGCCTGGTCGGCTTGGGCAATCGGGGGTTGGGGCTTGGTTGGCATTGAAGGTCTCTTGATTGGAGTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCAACAGGGATCGCACCGAGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5201808‑5201627 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggagcgggtttacccgcgaagaggccggcacaggcaaCTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTACCAGGAA > NC_002947/5201722‑5201867 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |