New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4222784 =	12 (0.710)	4 (0.240)	4/270	1.7	25.3%	coding (115/204 nt)	PP_3701	hypothetical protein
	?	NC_002947	4222804 =	12 (0.730)					coding (95/204 nt)	PP_3701	hypothetical protein

GTGCCTGCCCGGCCAGAAGGCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4222809‑4222784 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcAGGCACTCAGTCGACCTTGATGGTAAACCACGGCCAACCACTCCGGTTGAATCAAAACCGATTTCCAGGTGATTGCATGACCTTGTCGCACGCAATTTTGGTACTTCTGCTAGCAGAGCGGATCCACGGCACCGATGCTGCGATCC  >  NC_002947/4222804‑4222949                                                                                                                                                                              GTGCCTGCCCGGCCAGAAGGCAGGGCAGGCACTCAGTCGACCTTGATGGTAAACCACGGCCAACCACTCCGGTTGAATC                                                                                               <  1:290841/79‑1 GTGCCTGCCCGGCCAGAAGGCAGGGCAGGCACTCAGTCGACCTTGATGGTAAACCACGGCCAACCACTCCGGTTGAATC                                                                                               >  2:290841/1‑79            GCCAGAAGGCAGGGCCGGCACTCAGTCGACCTTGATGGTAAACCACGGCCAACCACTCCGGTTGAATCAAAACCGATTTCCAGGTGATT                                                                          >  1:76798/1‑89            GCCAGAAGGCAGGGCCGGCACTCAGTCGACCTTGATGGTAAACCACGGCCAACCACTCCGGTTGAATCAAAACCGATTTCCAGGTGATT                                                                          <  2:76798/89‑1                       GGGCAGGCACTCAGTCGACCTTGATGGTAAACCACGGCCAACCACTCCGGTTGAATCAAAACCGATTTCCAGGTGATTGCATGACCTTGTCGCACGCAATTTTGGTACTTCTGCTAGCAGAGCGGATCCACGGCACCGATGCTGCGATCC  >  1:218516/1‑150                                                                                                                                                                              GTGCCTGCCCGGCCAGAAGGCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4222809‑4222784 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcAGGCACTCAGTCGACCTTGATGGTAAACCACGGCCAACCACTCCGGTTGAATCAAAACCGATTTCCAGGTGATTGCATGACCTTGTCGCACGCAATTTTGGTACTTCTGCTAGCAGAGCGGATCCACGGCACCGATGCTGCGATCC  >  NC_002947/4222804‑4222949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.