New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5162618 = | 10 (0.590) | 6 (0.440) | 3/226 | 1.7 | 45.9% | intergenic (+93/+108) | PP_4544/PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase |
? | NC_002947 | 5162702 = | 6 (0.440) | intergenic (+177/+24) | PP_4544/PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase |
GCTGACGTCGACACCCTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGG > NC_002947/5162481‑5162687 | gCTGACGTCGACACCCTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAACCGCCGACCCCTTCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTg < 1:146617/150‑1 (MQ=255) cTGACGTCGACACCCTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGc < 2:293113/150‑1 (MQ=255) tGACGTCGACACCCTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGcc > 1:370451/1‑150 (MQ=255) ttccacctgtaccaggatgacctggccaaaggctcgttgggcgtgttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcctCTTCGCGGGCTTGCCCGCTCCcac < 1:19092‑M1/24‑1 (MQ=255) tccacctgtaccaggatgacctggccaaaggctcgttgggcgtgttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcctCTTCGCGGGCTTGCCCGCTCCcaca > 1:355087‑M1/126‑150 (MQ=255) ccTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGAc < 2:370451/150‑1 (MQ=255) ccTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGAc < 1:191125/150‑1 (MQ=255) ccAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGaa < 1:145639/150‑1 (MQ=255) cacCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCtgt < 2:172361/150‑1 (MQ=255) acCCTGCTGTGTTTCCCCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCtgtg < 1:146110/150‑1 (MQ=255) gcgtgttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcctCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTgg > 1:336066‑M1/87‑150 (MQ=255) gcgtgttcagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgattgttacggtcaCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAACACTTGAGAACTGTGCTGTACCTGTgg > 1:116778‑M1/87‑150 (MQ=255) ccTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCcaca < 1:159882/110‑1 (MQ=255) ccTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCcaca > 2:159882/1‑110 (MQ=255) ttgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcccCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCg > 1:64060‑M1/82‑150 (MQ=255) tgagctcgtttggtgcggggtattcgattggtagtgtgattctgcgcaagcgctgattcatcaggcgcctgttacggcctCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCgg > 2:19092‑M1/81‑150 (MQ=255) aagcgctgattcatcaggcgcctgttacggcctCTTCGCGGGCTTGCCCGCTCCCACAGGTACAGCACAGACCTTGAGAACTGTGc > 1:40888‑M1/34‑86 (MQ=255) aagcgctgattcatcaggcgcctgttacggcctCTTCGCGGGCTTGCCCGCTCCCACAGGTACAGCACAGACCTTGAGAACTGTGc < 2:40888‑M1/53‑1 (MQ=255) | GCTGACGTCGACACCCTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGTATCACCACAGACCTTGAGAACTGTGCTGTACCTGTGGGAGCGG > NC_002947/5162481‑5162687 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |