New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6060500	9 (0.530)	3 (0.200)	3/250	1.8	21.4%	intergenic (+80/+101)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
	?	NC_002947	= 6060559	14 (0.920)					intergenic (+139/+42)	PP_5311/PP_5312	signal transduction protein/hypothetical protein

GCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCAT  >  NC_002947/6060414‑6060705                                                                                                                                                  |                                                                                                                                                   gcattaagcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACgccc                                                                                                                                                <  2:57735‑M2/150‑5 (MQ=255)      aagcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACgcccgctcc                                                                                                                                           >  2:318792‑M2/1‑141 (MQ=255)               cacaTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTaa                                                                                                                                  <  2:234758/150‑1 (MQ=255)                   tAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGACGGTGTCATGCACCGAGTCGCCTCTGTCGCGGGCACGCCCGCTCCCACAGGTAAAGCg                                                                                                                              >  2:202612/1‑150 (MQ=37)                    aGCCTGCTGGCGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCGTGCACCGCGTTGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGt                                                                                                                             <  2:167549/150‑1 (MQ=255)                                            tCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCCTCATACCCGTCGCGCTTCATcc                                                                                                     >  2:332825/1‑150 (MQ=255)                                                                               ggAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACgcccgctcccacagtccaaaatcgcgccagctgttagaaattgagcaagacagttgctc                                                                                         >  2:347008‑M2/1‑68 (MQ=255)                                                                               ggAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACgcccgctcccacagtccaaaatcgcgccagctgttagaaattgagcaagacagttgctc                                                                                         <  1:347008‑M2/127‑60 (MQ=255)                                                                                            ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACgcccgctcccacagtccaaaatcgcgccagctgttagaaattgagcaagacagttgctcccgcaggctatgtgttaatgcttaatgcggtgcatg                                                     <  1:363824‑M2/150‑96 (MQ=255)                                                                                            ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCAc                                                     >  2:310842/1‑150 (MQ=255)                                                                                             cgcgAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCAcc                                                    >  1:304948/1‑150 (MQ=255)                                                                                                gAACAGCGGTGAAGCCGGTGCCACGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCATCGGGCTTCAGCCTTTCTTCTTTTGTTTCAGGTATTTCATCAACCCCTGGAACCACATCAcccga                                                 <  2:84324/150‑4 (MQ=38)                                                                                                   cacCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGCGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGcc                                              >  2:280032/1‑150 (MQ=255)                                                                                                     ccGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCgg                                            <  1:332825/150‑1 (MQ=255)                                                                                                             gCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCt                                    >  1:164557/1‑150 (MQ=255)                                                                                                              ccGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCtt                                   >  1:174164/1‑150 (MQ=255)                                                                                                                        gCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGAtg                         >  1:254218/1‑150 (MQ=255)                                                                                                                                  gCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCGCCTCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCt               <  1:202612/150‑1 (MQ=255)                                                                                                                                               gCACGCCCGCTTCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCAt  <  1:57735/150‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                   GCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCACAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCAT  >  NC_002947/6060414‑6060705

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.