New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2253844 | 10 (0.590) | 3 (0.180) | 3/270 | 2.0 | 25.3% | coding (120/1083 nt) | leuB | 3‑isopropylmalate dehydrogenase |
? | NC_002947 | = 2253880 | 8 (0.490) | coding (156/1083 nt) | leuB | 3‑isopropylmalate dehydrogenase |
TCTCCCAGGTGACGGTATCGGCCCGGAAATCATGGCCGAGGCAGTCAAGGTACTGGAGCTGGCCAACGACAAGTTCCAGCTCGGCTTCAGCCTGGCGCACGACGTGATTGGCGGTGCCGCCATCGACAAGCACGGTGTGCCGCTGGCCGACGAAACCCTGGAGCGTGCGCGCAAGGCCGATGCAGTGCTGCTGGGGGCTGTGGGCGGGCCGAAGTGGGACAAGATCGAGCGAGACATTCGCCCGGAGCGCGGCCTGCTGAAGATCCGCTCGCAACTG > NC_002947/2253745‑2254021 | tctcCCAGGTGACGGTATCGGCCCGGAAATCATGGCCGAGGCAGTCAAGGTACTGGAGCTGGCCAACGACAAGTTCCAGCTCGGCTTCAGCCTGGCGCACGACGTGATTGGCGGTGCCGCCATCGACAAGCACGGTGTGCCGCTGGCcga > 1:353147/1‑150 (MQ=255) ggAAATCATGGCCGAGGCAGTCAAGGTACTGGAGCTGGCCAACGACAAGTTCCAGCTCGGCTTCAGCCTGGCGCACGACGTGATTGGCGGTGCCGCCATCGACAAGCACGGTGTGCCGCTGGCCGACGAAACCCTGGAGCGTGCGCGCaa < 2:355653/150‑1 (MQ=255) aaGGTACTGGAGCTGGCCAACGACAAGTTCCAGCTCGGCTTCAGCCTGGCGCACGACGTGATTGGCGGTGCCGCCATCGACAAGCACGGTGTGCCGCTGGCCGACGAAACCCTGGAGCGTGCGCGCAAGGCCGATGCAGTGCTGCTgggg > 1:251702/1‑150 (MQ=255) ttCCAGCTCGGCTTCAGCCTGGCGCACGACGTGATTGGCGGTGCCGCCATCGACAAGCACGGTGTGCCGCTGGCCGACGAAACCCTGGAGCGTGCGCGCAAGGCCGATGCAGTGCTGCTGGGGGCTGTGGGCGGGCCGAAGTGGGACAAg < 2:318875/150‑1 (MQ=255) ccTGGCGCACGACGTGATTGGCGGTGCCGCCATCGACAAGCACGGTGTGCCGCTGGCCGACGAAACCCTGGAGCGTGCGCGCAAGGCCGATGCAGTGCTGCTGGGGGCTGTGGGCGGGCCGAAGTGGGACAAGATCGAGCGAGACATTCg > 2:113412/1‑150 (MQ=255) tGGCGCACGACGTGATTGGCGGTGCCGCCATCGACAAGCACGGTgtgccaggctgaagccgagctggaacttgtcgttggccagctccagtaccttgactgcctcggccatgatttccgggccgataccgtcacctgggagaatcagaat < 1:114764‑M2/150‑107 (MQ=255) tGGCGCACGACGGGATTGGCGGTGCCGCCATCGAAAAGCACGGTgtgcgccaggctgaagccgagctggaacttgtcgttggccagctccagtaccttgactgcctcggccatgatttccgggccgataccgtcacctgggagaatcaga > 1:180666‑M2/1‑44 (MQ=255) gcgcACGACGTGATTGGCGGTGCCGCCATCGACAAGCACGGTgtgcgccaggctgaagccgagctggaacttgtcgttggccagctccagtaccttgactgcctcggccctgatttgcgggccgataccgtcaccagggagaatcagaaa < 2:180666‑M2/150‑109 (MQ=255) gacgTGATTGGCGGTGCCGCCATCGACAAGCACGGTGTGCCGCTGGCCGACGAAACCCTGGAGCGTGCGCGCAAGGCCGATGCAGTGCTGCTGGGGGCTGTGGGCGGGCCGAAGTGGGACAAGATCGAGCGAGACAGGCGCCCGGAgcgc > 1:255971/1‑150 (MQ=255) acgTGATTGGCGGTGCCGCCATCGACAAGCACGGTGTGCCGCTGGCCGATGAAACCCTGGAGCGTGCGCGCAAGGCCGATGCAGTGCTGCTGGGGGCTGTGGGCGGGCCGAAGTGGGACAAGATCGAGCGAGACATTCGCCCGGAGcgcg < 2:115654/150‑1 (MQ=255) aaGCACGGTGTGCCGCTGGCCGACGAAACCCTAGAGCGTGCGCGCAAGGCCGATGCAGTGCTGCTGGGGGCTGTGGGCGGGCCGAAGTGGGACAAGATCGAGCGAGACATTCGCCCGGAGCGCGGCCTGCTGAAGATCCGCTCGCAACTg < 1:228884/150‑1 (MQ=255) | TCTCCCAGGTGACGGTATCGGCCCGGAAATCATGGCCGAGGCAGTCAAGGTACTGGAGCTGGCCAACGACAAGTTCCAGCTCGGCTTCAGCCTGGCGCACGACGTGATTGGCGGTGCCGCCATCGACAAGCACGGTGTGCCGCTGGCCGACGAAACCCTGGAGCGTGCGCGCAAGGCCGATGCAGTGCTGCTGGGGGCTGTGGGCGGGCCGAAGTGGGACAAGATCGAGCGAGACATTCGCCCGGAGCGCGGCCTGCTGAAGATCCGCTCGCAACTG > NC_002947/2253745‑2254021 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |