New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 225384410 (0.590)3 (0.180) 3/270 2.0 25.3% coding (120/1083 nt) leuB 3‑isopropylmalate dehydrogenase
?NC_002947 = 2253880 8 (0.490)coding (156/1083 nt) leuB 3‑isopropylmalate dehydrogenase

TCTCCCAGGTGACGGTATCGGCCCGGAAATCATGGCCGAGGCAGTCAAGGTACTGGAGCTGGCCAACGACAAGTTCCAGCTCGGCTTCAGCCTGGCGCACGACGTGATTGGCGGTGCCGCCATCGACAAGCACGGTGTGCCGCTGGCCGACGAAACCCTGGAGCGTGCGCGCAAGGCCGATGCAGTGCTGCTGGGGGCTGTGGGCGGGCCGAAGTGGGACAAGATCGAGCGAGACATTCGCCCGGAGCGCGGCCTGCTGAAGATCCGCTCGCAACTG  >  NC_002947/2253745‑2254021
                                                                                                                                       |                                                                                                                                             
tctcCCAGGTGACGGTATCGGCCCGGAAATCATGGCCGAGGCAGTCAAGGTACTGGAGCTGGCCAACGACAAGTTCCAGCTCGGCTTCAGCCTGGCGCACGACGTGATTGGCGGTGCCGCCATCGACAAGCACGGTGTGCCGCTGGCcga                                                                                                                                 >  1:353147/1‑150 (MQ=255)
                        ggAAATCATGGCCGAGGCAGTCAAGGTACTGGAGCTGGCCAACGACAAGTTCCAGCTCGGCTTCAGCCTGGCGCACGACGTGATTGGCGGTGCCGCCATCGACAAGCACGGTGTGCCGCTGGCCGACGAAACCCTGGAGCGTGCGCGCaa                                                                                                         <  2:355653/150‑1 (MQ=255)
                                              aaGGTACTGGAGCTGGCCAACGACAAGTTCCAGCTCGGCTTCAGCCTGGCGCACGACGTGATTGGCGGTGCCGCCATCGACAAGCACGGTGTGCCGCTGGCCGACGAAACCCTGGAGCGTGCGCGCAAGGCCGATGCAGTGCTGCTgggg                                                                                   >  1:251702/1‑150 (MQ=255)
                                                                         ttCCAGCTCGGCTTCAGCCTGGCGCACGACGTGATTGGCGGTGCCGCCATCGACAAGCACGGTGTGCCGCTGGCCGACGAAACCCTGGAGCGTGCGCGCAAGGCCGATGCAGTGCTGCTGGGGGCTGTGGGCGGGCCGAAGTGGGACAAg                                                        <  2:318875/150‑1 (MQ=255)
                                                                                          ccTGGCGCACGACGTGATTGGCGGTGCCGCCATCGACAAGCACGGTGTGCCGCTGGCCGACGAAACCCTGGAGCGTGCGCGCAAGGCCGATGCAGTGCTGCTGGGGGCTGTGGGCGGGCCGAAGTGGGACAAGATCGAGCGAGACATTCg                                       >  2:113412/1‑150 (MQ=255)
                                                                                            tGGCGCACGACGTGATTGGCGGTGCCGCCATCGACAAGCACGGTgtgccaggctgaagccgagctggaacttgtcgttggccagctccagtaccttgactgcctcggccatgatttccgggccgataccgtcacctgggagaatcagaat                                     <  1:114764‑M2/150‑107 (MQ=255)
                                                                                            tGGCGCACGACGGGATTGGCGGTGCCGCCATCGAAAAGCACGGTgtgcgccaggctgaagccgagctggaacttgtcgttggccagctccagtaccttgactgcctcggccatgatttccgggccgataccgtcacctgggagaatcaga                                     >  1:180666‑M2/1‑44 (MQ=255)
                                                                                              gcgcACGACGTGATTGGCGGTGCCGCCATCGACAAGCACGGTgtgcgccaggctgaagccgagctggaacttgtcgttggccagctccagtaccttgactgcctcggccctgatttgcgggccgataccgtcaccagggagaatcagaaa                                   <  2:180666‑M2/150‑109 (MQ=255)
                                                                                                    gacgTGATTGGCGGTGCCGCCATCGACAAGCACGGTGTGCCGCTGGCCGACGAAACCCTGGAGCGTGCGCGCAAGGCCGATGCAGTGCTGCTGGGGGCTGTGGGCGGGCCGAAGTGGGACAAGATCGAGCGAGACAGGCGCCCGGAgcgc                             >  1:255971/1‑150 (MQ=255)
                                                                                                     acgTGATTGGCGGTGCCGCCATCGACAAGCACGGTGTGCCGCTGGCCGATGAAACCCTGGAGCGTGCGCGCAAGGCCGATGCAGTGCTGCTGGGGGCTGTGGGCGGGCCGAAGTGGGACAAGATCGAGCGAGACATTCGCCCGGAGcgcg                            <  2:115654/150‑1 (MQ=255)
                                                                                                                               aaGCACGGTGTGCCGCTGGCCGACGAAACCCTAGAGCGTGCGCGCAAGGCCGATGCAGTGCTGCTGGGGGCTGTGGGCGGGCCGAAGTGGGACAAGATCGAGCGAGACATTCGCCCGGAGCGCGGCCTGCTGAAGATCCGCTCGCAACTg  <  1:228884/150‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                             
TCTCCCAGGTGACGGTATCGGCCCGGAAATCATGGCCGAGGCAGTCAAGGTACTGGAGCTGGCCAACGACAAGTTCCAGCTCGGCTTCAGCCTGGCGCACGACGTGATTGGCGGTGCCGCCATCGACAAGCACGGTGTGCCGCTGGCCGACGAAACCCTGGAGCGTGCGCGCAAGGCCGATGCAGTGCTGCTGGGGGCTGTGGGCGGGCCGAAGTGGGACAAGATCGAGCGAGACATTCGCCCGGAGCGCGGCCTGCTGAAGATCCGCTCGCAACTG  >  NC_002947/2253745‑2254021

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.