| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,750,068:2 | +A | 5.7% | intergenic (+44/+28) | PP_4203 → / ← mqsA | ubiquinone oxidoreductase electron transfer flavoprotein/type II toxin‑antitoxin MqsRA system antitoxin/DNA‑binding transcriptional repressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,750,068 | 2 | . | A | 5.7% | 292.9 / 10.8 | 70 | intergenic (+44/+28) | PP_4203/mqsA | ubiquinone oxidoreductase electron transfer flavoprotein/type II toxin‑antitoxin MqsRA system antitoxin/DNA‑binding transcriptional repressor |
| Reads supporting (aligned to +/- strand): ref base . (32/34); new base A (2/2); total (34/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.19e-01 | |||||||||||
GAACTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCATTGACC > NC_002947/4749922‑4750213 | gAACTGCGTGCACTGCAAGACTTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGCCAACAAAAAGCCCCCGG‑‑CTCATGAgaaccg < 1:1013444/150‑6 (MQ=255) gCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTCAAGGCGCTGCCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGG‑‑CTCATGAGAACCGGGGGCtttt < 2:1205327/150‑1 (MQ=38) cTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTttgt < 2:1283254/150‑1 (MQ=255) tGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTttgtt < 1:1466214/150‑1 (MQ=255) cAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTgg < 2:58664/150‑1 (MQ=255) cAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGAGCAGGTCTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTgg < 1:1335455/150‑1 (MQ=255) cATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCa < 2:960863/150‑1 (MQ=255) aTCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAg > 2:413069/1‑150 (MQ=255) aaGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCAGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCa < 1:355604/150‑1 (MQ=255) ccGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGc > 2:397863/1‑150 (MQ=255) ggCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCAc > 2:234454/1‑150 (MQ=255) ccAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑c < 1:660772/106‑1 (MQ=255) ccAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑c > 2:660772/1‑106 (MQ=255) aGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCt < 1:413069/150‑1 (MQ=255) ccTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGtt > 2:1408772/1‑150 (MQ=255) tGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCt < 1:1408772/150‑1 (MQ=255) gTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGa < 2:1354262/150‑1 (MQ=255) aCCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAgg < 1:330315/118‑1 (MQ=255) aCCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAgg > 2:330315/1‑118 (MQ=255) cccTGAAGGCGCTGGCGGGCCGAACTATGCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CGGGGGGCTTTTTGTTGGCTGCCATTAGCTGGCAGTACACACTTCCTCAAAGAGTACTgtagtggg > 2:671549/1‑143 (MQ=255) cccTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCggggg > 2:1266949/1‑91 (MQ=255) cccTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCggggg < 1:1266949/91‑1 (MQ=255) cTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCACCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGAt > 1:476446/1‑150 (MQ=255) ggCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCAACTATCAGCCAACATGCACTTCCTCAAAGAGTTCTGGATGGCGATCcagc > 2:1503222/1‑150 (MQ=255) tGGCGGGCCGAACTATCTAAACGTGTAAGGCCCCTGCCCTTGCGGCAACAAACAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCATGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCtt < 1:1318213/150‑1 (MQ=255) tGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGAGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCtt < 2:1134728/150‑1 (MQ=255) gggCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAAGCACTACGCGTCTGCTCGATGAATTTGTTATGGCGATCCAGCAGCTTGAGc > 1:1598889/1‑150 (MQ=255) ccGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGt > 2:653683/1‑150 (MQ=255) cGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGa < 2:1452996/135‑1 (MQ=255) cGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGa > 1:1452996/1‑135 (MQ=255) cGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCCCCAACg > 2:613170/1‑150 (MQ=255) gAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCttttt > 1:707975/1‑67 (MQ=255) gAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCttttt < 2:707975/67‑1 (MQ=255) gAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACt < 2:1445967/97‑1 (MQ=255) gAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACt > 1:1445967/1‑97 (MQ=255) cATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCAc < 1:653683/150‑1 (MQ=255) aTGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGt > 2:1094897/1‑135 (MQ=255) aTGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGt < 1:1094897/135‑1 (MQ=255) aGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCgg > 1:733227/1‑150 (MQ=255) ggCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGtt > 2:662629/1‑130 (MQ=255) ggCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGtt < 1:662629/130‑1 (MQ=255) ccccTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCaaa > 1:826836/1‑93 (MQ=255) ccccTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCaaa < 2:826836/93‑1 (MQ=255) cccTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTttgtt > 1:1535425/1‑57 (MQ=255) cccTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTttgtt < 2:1535425/57‑1 (MQ=255) cccTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGc > 1:278571/1‑74 (MQ=255) cccTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGc < 2:278571/74‑1 (MQ=255) cccTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGggtg < 1:1084414/150‑1 (MQ=255) ccTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGc > 1:940239/1‑73 (MQ=255) ccTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGc < 2:940239/73‑1 (MQ=255) tGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTc > 1:1413579/1‑150 (MQ=255) gCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGAAGTTTCACCAACGCCACTGGCGGGGTGGTCt > 1:83033/1‑150 (MQ=255) ccTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTg < 1:397863/150‑1 (MQ=255) ggCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGt < 2:711315/114‑1 (MQ=255) ggCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGt > 1:711315/1‑114 (MQ=255) ggCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGttt > 2:1203998/1‑150 (MQ=255) gCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGtttt > 2:287691/1‑150 (MQ=255) gCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGtttt < 1:234454/150‑1 (MQ=255) aacaaAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGa < 2:495071/93‑1 (MQ=255) aacaaAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGa > 1:495071/1‑93 (MQ=255) aaaaaGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATaa < 2:733227/150‑1 (MQ=255) aaaGCCCCCGG‑‑CTCATGAGAACCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCt > 1:1348678/1‑79 (MQ=18) aaaGCCCCCGG‑‑CTCATGAGAACCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCt < 2:1348678/79‑1 (MQ=18) aaGCCCCCGG‑‑CTCATGAGAACCGGGGGCTTTTTGTTGCCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACgg > 1:1205868/1‑150 (MQ=38) cccGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGaa > 2:1347002/1‑150 (MQ=255) gTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCa < 2:476446/150‑1 (MQ=255) ttCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGTCATGGTCATCCAGGAGGCACTGCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCAt < 2:1413579/150‑1 (MQ=255) tcATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTGCTGGATCGCCATc < 1:952278/76‑1 (MQ=255) cATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCACGCAGTACGCACTTCCTCAAAGAGTTCTGGATCGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCATTGAc < 1:671549/150‑1 (MQ=255) aTGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCt > 1:74186/1‑63 (MQ=255) aTGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCt < 2:74186/63‑1 (MQ=255) aTGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCATTGAcc > 1:164318/1‑150 (MQ=255) aTGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACAAACGCCACTGGCGGGGTGTCCTGGCCGGTTTCATAACGGGAGAACGCATTGAcc > 2:129621/1‑150 (MQ=255) | GAACTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGAACATCACCTGGGTCACCCCTGAAGGCGCTGGCGGGCCGAACTATCCGAACATGTAAGGCCCCTGCCCTTGCGGCAACAAAAAGCCCCCGGTTCTCATGAG‑‑CCGGGGGCTTTTTGTTGGCTGCCATTATCAGGCAGTACGCACTTCCTCAAAGAGTTCTGGATGGCGATCCAGCAGCTTGAGCAGTTTCACCAACGCCACTGGCGGGGTGGTCTTGCCGTTTTCATAACGGGAGAACGCATTGACC > NC_002947/4749922‑4750213 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |