New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 100459 | 68 (1.140) | 5 (0.100) | 5/206 | NT | 7.7% | intergenic (‑51/+71) | PP_0094/PP_0095 | 5'‑nucleotidase/hypothetical protein |
? | NC_002947 | = 100507 | 62 (1.210) | intergenic (‑99/+23) | PP_0094/PP_0095 | 5'‑nucleotidase/hypothetical protein |
GGTCCGGTTCGTCGATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/100294‑100459 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcatgcccgcCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACGGCACCCTGAC < NC_002947/100507‑100365 GGTCCGGTTCGTCGATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCT < 1:397803/150‑1 GTTCGTCGATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGG < 1:577263/150‑1 TCGATGCCCAGCTTGGCCAGGGCGTACTTGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATG > 1:220551/1‑150 TCGATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATG > 2:415819/1‑150 CTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCG < 2:1494132/133‑1 CTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCG > 1:1494132/1‑133 TACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTT > 1:911167/1‑116 TACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTT < 2:911167/116‑1 TGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCTCCCACAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTT < 2:1624071/150‑1 GATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCCGCGTGGCCTTCTTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCG < 1:1329494/120‑1 GATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCCGCGTGGCCTTCTTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCG > 2:1329494/1‑120 CAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGC > 1:394796/1‑102 CAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGC < 2:394796/102‑1 CTTCTTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTG < 1:1204367/66‑1 CTTCTTCGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTG > 2:1204367/1‑66 CGCGGGCATGCCCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACGGC < 1:1485047/150‑1 gcCATGCCCTCCCCCGCAGGTTGAGGGGCCCATTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACACGCCCCATCAAAACATCCTCTTCGACCTCGACGGCACCC < 2:120164/148‑1 CCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACGGCACCCTGAC > 2:1437282/1‑147 CCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACGGCACCCTGAC < 1:1437282/147‑1 CCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGA > 2:1208149/1‑129 CCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGA < 1:1208149/129‑1 CCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCAC < 2:1341545/109‑1 CCGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCAC > 1:1341545/1‑109 CGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAt < 1:586729/69‑2 CGCCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAt > 2:586729/1‑68 GGTCCGGTTCGTCGATGCCCAGCTTGGCCAGGGCGTACTGGATCGAGCGAGTGATGCCCAGGCGTGGGTCGGTCAGGGTGCCGTCGAGGTCGAAGAGGATGTTTTGCTGGTGCATGTACAGGGTTCCACTTGAGTGCTGCGTGGCCTTCTTCGCGGGCATGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/100294‑100459 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcatgcccgcCCCCGCAGGTTGAGTGGCCCCTTCAAGGCCTGCGCTTTACCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCCACGCAGCACTCAAGTGGAACCCTGTACATGCACCAGCAAAACATCCTCTTCGACCTCGACGGCACCCTGAC < NC_002947/100507‑100365 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |