New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 530833 = | 48 (0.800) | 3 (0.050) | 3/234 | NT | 5.8% | coding (744/960 nt) | birA | bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA |
? | NC_002947 | 530860 = | 51 (0.870) | coding (771/960 nt) | birA | bifunctional biotin‑[acetyl‑CoA‑carboxylase] ligase/biotin operon repressor BirA |
CTCAAGGCGCAAACCACCCTGCCCGTCGACGCCAAGAACCACGCCATCAATACGTGTACTACCAGCAACCAGCGATACATTGCGCCCCTGCCACAAGTGCGCCTGCTCCCACTCCTCCTGGAATGCGGCAAAGCCGTAGCGGCGATGACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/530983‑530833 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTT > NC_002947/530860‑530972 CTCAAGGCGCAAACCACCCTGCCCGTCGACGCCAAGAACCACGCCATCAATACGTGTACTACCAGCAACCAGCGATACATTGCGCCCCTGCCACAAGTGCGCCTGCTCCCACTCCTCCTGGAATGCGGCAAAGCCGTAGCGGCGATGACG > 2:850032/1‑150 CTCAAGGCGCAAACCACCCTGCCCGTCGACGCCAAGAACCACGCCATCAATACGTGTACTACCAGCAACCAGCGATACATTGCGCCCCTGCCACAAGTGCGCCTGCGCCCTCTCCGCCGGGAATGCGGCAAAGCCGTAGCGGCGATGACG > 2:499547/1‑150 TCAAGGCGCAAACCACCCTGCCCGTCGACGCCAAGACGGCCTCCATCAATACGTGTACTACCAGCAACCAGCGATACATTGCGCCCCTGCCACAAGTGCGCCTGCTCCCACTCCTCCTGGAATGCGGCAAAGCCGTAGCGGCGATGACGC < 1:499547/150‑1 GCCCCTGCCACAAGTGCGCCTGCTCCCACTCCTCCTGGAATGCGGCAAAGCCGTAGCGGCGATGACGC < 1:764671/68‑1 GCCCCTGCCACAAGTGCGCCTGCTCCCACTCCTCCTGGAATGCGGCAAAGCCGTAGCGGCGATGACGC > 2:764671/1‑68 CTCCTGGAATGCGGCAAAGCCGTAGCGGCGATGACGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAGTGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTT > 1:950581/1‑150 TCCTGGAATGCGGCAAAGCCGTGGCGGCGATGACGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATT < 2:594321/112‑1 TCCTGGAATGCGGCAAAGCCGTAGCGGCGATGACGCATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATT > 1:594321/1‑112 CTCAAGGCGCAAACCACCCTGCCCGTCGACGCCAAGAACCACGCCATCAATACGTGTACTACCAGCAACCAGCGATACATTGCGCCCCTGCCACAAGTGCGCCTGCTCCCACTCCTCCTGGAATGCGGCAAAGCCGTAGCGGCGATGACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/530983‑530833 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcATTCCAGGAGGAGTGGGAGCAGGCGCACTTGTGGCAGGGGCGCAATGTATCGCTGGTTGCTGGTAGTACACGTATTGATGGCGTGGTTCTTGGCGTCGACGGGCAGGGTGGTT > NC_002947/530860‑530972 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |