New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 637157	52 (0.870)	5 (0.090)	4/228	NT	8.4%	coding (32/630 nt)	PP_0548	phenylacrylic acid decarboxylase PadA
	?	NC_002947	= 637180	59 (1.040)					coding (55/630 nt)	PP_0548	phenylacrylic acid decarboxylase PadA

GCCGATAGCCTCGAAGCGATCATCGAGCGGGTCAAAGGTCAGGCTCGCCCAGGCACCCAGGTGGTGATCATGAGCAACGGCGGCTTCGGCGGCCTGCACGGCAAGCTGGCCGAGGCGCTGAAGTGAACGGGCCGGAACGCATCACCCTGGCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/637004‑637157 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccatACTGGGCACCCGAGGCGCCCGTCATGGCCAGGGTGATGCGTTCCGGCCCGTTCACTTCAGCGCCTCGGCCAGCTTGCCGTGCAGGCCGCCGAAGCCGCCGTTGCTCATGATCACCACCTGGGTGCCTGGGCGAGCCTGACCTTTGACCC  <  NC_002947/637180‑637032                                                                                                                                                                                                                                                                                                                 GCCGATAGCCTCGAAGCGATCATCGAGCGGGTCAAAGGTCAGGCTCGCCCAGGCACCCAGGTGGTGATCATGAGCAACGGCGGCTTCGGCGGCCTGCACGGCAAGCTGGCCGAGGCGCTGAAGTGAACGGGCCGGAACGCATCACCCTGG                                                                                                                                                           <  2:389642/150‑1  CCGATAGCCTCGAAGCGATCATCGAGCGGGTCAAAGGTCAGGCTCGCCCAGGCACCCAGGTGGTGATCATGAGCAACGGCGGCTTCGGCGGCCTGCACGGCACGCTGGCCGAGGCGCTGAAGTGAACGGGCCGGAACGCATCACCCTGGC                                                                                                                                                          >  1:997104/1‑150  CCGATAGCCTCGAAGCGATCATCGAGCGGGTCAAAGGTCAGGCTCGCCCAGGCACCCAGGTGGTGATCATGAGCAACGGCGGCTTCGGCGGCCTGCACGGCAAGCTGGCCGAGGCGCTGAAGTGAACGGGCCGGAACGCATCACCCTGGC                                                                                                                                                          <  2:752707/150‑1          CTCGAAGCGATCATCGAGCGGGTCAAAGGTCAGGCTCGCCCAGGCACCCAGGTGGTGATCATGAGCAACGGCGGCTTCGGCGGCCTGCACGGCAAGCTGGCCGAGGCGCTGAAGTGAACGGGCCGGAACGCATCACCCTGGCCATACTGG                                                                                                                                                  >  1:305066/1‑150                                   AAGGTCAGGCTCGCCCAGGCACCCAGGTGGTGATCATGAGCAACGGCGGCTTCGGCGGCCTGCACGGCAAGCTGGCCGAGGCGCTGAAGTGAACGGGCCGGAACGCATCACCCTGGCCATACTGGGCACCCGAGGCGCCCGTCATGGCCA                                                                                                                         <  2:1013739/150‑1                                   AAGGTCAGGCTCGCCCAGGCACCCAGGTGGTGATCATGAGCAACGGCGGCTTCGGCGGCCTGCACGGCAAGCTGGCCGAGGCGCTGAAGTGAACGGGCCGGAACGCATCACCCTGGCCATACTGGGCACCCGAGGCGCCCGTCATGGCCA                                                                                                                         <  2:305066/150‑1                                       TCAGGCTCGCCCAGGCACCCAGGTGGTGATCATGAGCAACGGCGGCTTCGGCGGCCTGCACGGCAAGCTGGCCGAGGCGCTGAAGTGAACGGGCCGGAACGCATCACCCTGGCCATACTGGGCACCCGAGGCGCCCGTCATGGCCAGGGT                                                                                                                     <  1:814238/150‑1                                           GCTCGCCCAGGCACCCAGGTGGTGATCATGAGCAACGGCGGCTTCGGCGGCCTGCACGGCAAGCTGGCCGAGGCGCTGAAGTGAACGGGCCGGAACGCATCACCCTGGCCATACTGGGCACCCGAGGCGCCCGTCATGGCCAGGGTGA                                                                                                                   >  1:742080/1‑148                                           GCTCGCCCAGGCACCCAGGTGGTGATCATGAGCAACGGCGGCTTCGGCGGCCTGCACGGCAAGCTGGCCGAGGCGCTGAAGTGAACGGGCCGGAACGCATCACCCTGGCCATACTGGGCACCCGAGGCGCCCGTCATGGCCAGGGTGA                                                                                                                   <  2:742080/148‑1                                                                                                                                                     GGCCATACTGGGCACCCGAGGCGCCCGTCATGGCCCGGGTGATGCGTTCCGGCCCGTTCACTTCAGCGCCCCAGATCGCTTTCCGTGCAGGCCGCCGAAGCCGCCGTTGCTCATGATCACCACCTGGGTGCCTGGGCGAGCCTGACCTTT       <  2:875068/150‑1                                                                                                                                                       CCATACTGGGCACCCGAGGCGCCCGTCATGGCCAGGGTGATGCGTTCCGGCCCGTTCACTTCAGCGCCCCGGCCAGCTTGCCGTGCAGGCCGCCGAAGCCGCCGTTGCTCATGATCACCACCTGGGTGCCTGGGCGAGCATGACCTTTGA     >  2:34453/1‑150                                                                                                                                                        CATACTGGGCACCCGAGGCGCCCGTCATGGCCAGGGTGATGCGTTCCGGCCCGTTCACTTCAGCGCCTCGGCCAGCTTGCCGTGCAGGCCGCCGAAGCCGCCGTTGCTCATGATCACCACCTGGGTGCCTGGGCGAGCCTGACCTTTGAC    >  2:154444/1‑150                                                                                                                                                          TACTGGGCACCCGAGGCGCCCGTCATGGCCAGGGTGATGCGTTCCGGCCCGTTCACTTCAGCGCCTCGGCCAGCTTGCCGTGCAGGCCGCCGAAGCCGCCGTTGCTCATGATCACCACCTGGGTACCTGGGCGAGCCTGACCTTTGACCC  >  2:941930/1‑150                                                                                                                                                                                                                                                                                                                 GCCGATAGCCTCGAAGCGATCATCGAGCGGGTCAAAGGTCAGGCTCGCCCAGGCACCCAGGTGGTGATCATGAGCAACGGCGGCTTCGGCGGCCTGCACGGCAAGCTGGCCGAGGCGCTGAAGTGAACGGGCCGGAACGCATCACCCTGGCCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/637004‑637157 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccatACTGGGCACCCGAGGCGCCCGTCATGGCCAGGGTGATGCGTTCCGGCCCGTTCACTTCAGCGCCTCGGCCAGCTTGCCGTGCAGGCCGCCGAAGCCGCCGTTGCTCATGATCACCACCTGGGTGCCTGGGCGAGCCTGACCTTTGACCC  <  NC_002947/637180‑637032

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.