New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 940447	75 (1.250)	4 (0.070)	4/238	NT	6.5%	coding (5178/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	= 944273	41 (0.690)					coding (1352/18933 nt)	PP_0806	surface adhesion protein

CACAACACCCGTGCCGATCACGGTGCCACTGGCATCGCGCACCTCAACAGTGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/940390‑940447 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gTGATCGGCACGGGTGTCGTGGGTGCCAACGGCACCTTCCTGATCGACCTCGCCCCAGCCGCACAGCCGGGCGAGCAGTTGAGCCTGGTGCAGACCGACCCAAGCGGTAA  <  NC_002947/944273‑944165                                                                                                                                                                         CACAACACCCGTGCCGATCACGGTGCCACTGGCATCGCGCACCTCAACAGTGGCGCCGTGATCGGCACGGGTGTTGTGGGAGCCAACGGCACCTTCCTGATCGACCTCGCCCCAGCCGCGCAGCCGGGCGAGCAGTTGACCCTG                         >  1:1359512/1‑144 CACAACACCCGTGCCGATCACGGTGCCACTGGCATCGCGCACCTCAACAGTGGCGCCGTGATCGGCACGGGTGTTGTGGGAGCCAACGGCACCTTCCTGATCGACCTCGCCCCAGCCGCGCAGCCGGGCGAGCAGTTGACCCTG                         <  2:1359512/144‑1                    ACGGTGCCACTGGCATCGCGCACCTCAACAGTGGCGCCGTGATCGGCACGGGTGTTGTGGGAGCCAACGGCACCTTCCTGATCGACCTCGCCCCAGCCGCGCAGCCGGGCGAGCAGTTGACCCTGGTGCAGACCGACCCAAGCGGcaa  >  1:874587/1‑145                    ACGGTGCCACTGGCATCGCGCACCTCAACAGTGGCGCCGTGATCGGCACGGGTGTTGTGGGAGCCAACGGCACCTTCCTGATCGACCTCGCCCCAGCCGCGCAGCCGGGCGAGCAGTTGACCCTGGTGCAGACCGACCCAAGCGGCAA  <  2:874587/148‑1                                                                                                                                                                         CACAACACCCGTGCCGATCACGGTGCCACTGGCATCGCGCACCTCAACAGTGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/940390‑940447 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gTGATCGGCACGGGTGTCGTGGGTGCCAACGGCACCTTCCTGATCGACCTCGCCCCAGCCGCACAGCCGGGCGAGCAGTTGAGCCTGGTGCAGACCGACCCAAGCGGTAA  <  NC_002947/944273‑944165

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.